Year |
Citation |
Score |
2024 |
Xia Y, Shi Y. Diffusion MRI harmonization via personalized template mapping. Human Brain Mapping. 45: e26661. PMID 38520363 DOI: 10.1002/hbm.26661 |
0.313 |
|
2024 |
Huang S, Zhong L, Shi Y. Automated Mapping of Residual Distortion Severity in Diffusion MRI. Computational Diffusion Mri : Miccai Workshop. 14328: 58-69. PMID 38500569 DOI: 10.1007/978-3-031-47292-3_6 |
0.31 |
|
2023 |
Zhang J, Shi Y. Personalized Patch-based Normality Assessment of Brain Atrophy in Alzheimer's Disease. Medical Image Computing and Computer-Assisted Intervention : Miccai ... International Conference On Medical Image Computing and Computer-Assisted Intervention. 14224: 55-62. PMID 38501074 DOI: 10.1007/978-3-031-43904-9_6 |
0.328 |
|
2021 |
Zhao L, Matloff W, Shi Y, Cabeen RP, Toga AW. Mapping Complex Brain Torque Components and Their Genetic Architecture and Phenomic Associations in 24,112 Individuals. Biological Psychiatry. PMID 35027165 DOI: 10.1016/j.biopsych.2021.11.002 |
0.38 |
|
2021 |
Hall JR, Johnson LA, Zhang F, Petersen M, Toga AW, Shi Y, Mason D, Rissman RA, Yaffe K, O'Bryant SE. Using Fractional Anisotropy Imaging to Detect Mild Cognitive Impairment and Alzheimer's Disease among Mexican Americans and Non-Hispanic Whites: A HABLE Study. Dementia and Geriatric Cognitive Disorders. 1-8. PMID 34569492 DOI: 10.1159/000518102 |
0.321 |
|
2021 |
Schilling KG, Rheault F, Petit L, Hansen CB, Nath V, Yeh FC, Girard G, Barakovic M, Rafael-Patino J, Yu T, Fischi-Gomez E, Pizzolato M, Ocampo-Pineda M, Schiavi S, Canales-Rodríguez EJ, ... ... Shi Y, et al. Tractography dissection variability: what happens when 42 groups dissect 14 white matter bundles on the same dataset? Neuroimage. 118502. PMID 34433094 DOI: 10.1016/j.neuroimage.2021.118502 |
0.409 |
|
2021 |
O'Bryant SE, Johnson LA, Barber RC, Braskie MN, Christian B, Hall JR, Hazra N, King K, Kothapalli D, Large S, Mason D, Matsiyevskiy E, McColl R, Nandy R, Palmer R, ... ... Shi Y, et al. The Health & Aging Brain among Latino Elders (HABLE) study methods and participant characteristics. Alzheimer's & Dementia (Amsterdam, Netherlands). 13: e12202. PMID 34189247 DOI: 10.1002/dad2.12202 |
0.34 |
|
2021 |
Duffy BA, Zhao L, Sepehrband F, Min J, Wang DJ, Shi Y, Toga AW, Kim H. Retrospective motion artifact correction of structural MRI images using deep learning improves the quality of cortical surface reconstructions. Neuroimage. 117756. PMID 33460797 DOI: 10.1016/j.neuroimage.2021.117756 |
0.376 |
|
2020 |
Lynch KM, Page KA, Shi Y, Xiang AH, Toga AW, Clark KA. The effect of body mass index on hippocampal morphology and memory performance in late childhood and adolescence. Hippocampus. PMID 33174346 DOI: 10.1002/hipo.23280 |
0.317 |
|
2020 |
Xia Y, Shi Y. Groupwise Track Filtering via Iterative Message Passing and Pruning. Neuroimage. 117147. PMID 32673747 DOI: 10.1016/j.neuroimage.2020.117147 |
0.322 |
|
2019 |
Xu F, Ge X, Shi Y, Zhang Z, Tang Y, Lin X, Teng G, Zang F, Gao N, Liu H, Toga AW, Liu S. Morphometric development of the human fetal cerebellum during the early second trimester. Neuroimage. 116372. PMID 31751665 DOI: 10.1016/j.neuroimage.2019.116372 |
0.365 |
|
2019 |
Nath V, Schilling KG, Parvathaneni P, Huo Y, Blaber JA, Hainline AE, Barakovic M, Romascano D, Rafael-Patino J, Frigo M, Girard G, Thiran JP, Daducci A, Rowe M, Rodrigues P, ... ... Shi Y, et al. Tractography reproducibility challenge with empirical data (TraCED): The 2017 ISMRM diffusion study group challenge. Journal of Magnetic Resonance Imaging : Jmri. PMID 31179595 DOI: 10.1002/Jmri.26794 |
0.393 |
|
2018 |
Qiao Y, Sun W, Shi Y. FOD-based Registration for Susceptibility Distortion Correction in Connectome Imaging. Connectomics in Neuroimaging : Second International Workshop, Cni 2018, Held in Conjunction With Miccai 2018, Granada, Spain, September 20, 2018 : Proceedings. Cni (Workshop) (2nd : 2018 : Granada, Spain). 11083: 11-19. PMID 31559395 DOI: 10.1007/978-3-030-00755-3_2 |
0.319 |
|
2018 |
Schilling KG, Nath V, Hansen C, Parvathaneni P, Blaber J, Gao Y, Neher P, Aydogan DB, Shi Y, Ocampo-Pineda M, Schiavi S, Daducci A, Girard G, Barakovic M, Rafael-Patino J, et al. Limits to anatomical accuracy of diffusion tractography using modern approaches. Neuroimage. PMID 30317017 DOI: 10.1016/J.Neuroimage.2018.10.029 |
0.463 |
|
2018 |
Lynch KM, Shi Y, Toga AW, Clark KA. Hippocampal Shape Maturation in Childhood and Adolescence. Cerebral Cortex (New York, N.Y. : 1991). PMID 30272143 DOI: 10.1093/Cercor/Bhy244 |
0.389 |
|
2018 |
Wang J, Aydogan DB, Varma R, Toga AW, Shi Y. Modeling topographic regularity in structural brain connectivity with application to tractogram filtering. Neuroimage. PMID 30081193 DOI: 10.1016/j.neuroimage.2018.07.068 |
0.437 |
|
2018 |
Aydogan DB, Jacobs R, Dulawa S, Thompson SL, Francois MC, Toga AW, Dong H, Knowles JA, Shi Y. When tractography meets tracer injections: a systematic study of trends and variation sources of diffusion-based connectivity. Brain Structure & Function. PMID 29663135 DOI: 10.1007/S00429-018-1663-8 |
0.42 |
|
2018 |
Gahm JK, Shi Y. Riemannian metric optimization on surfaces (RMOS) for intrinsic brain mapping in the Laplace-Beltrami embedding space. Medical Image Analysis. 46: 189-201. PMID 29574399 DOI: 10.1016/J.Media.2018.03.004 |
0.331 |
|
2018 |
Tang Y, Zhao L, Lou Y, Shi Y, Fang R, Lin X, Liu S, Toga A. Brain structure differences between Chinese and Caucasian cohorts: A comprehensive morphometry study. Human Brain Mapping. PMID 29400417 DOI: 10.1002/hbm.23994 |
0.423 |
|
2017 |
Tang Y, Sun W, Toga AW, Ringman JM, Shi Y. A probabilistic atlas of human brainstem pathways based on connectome imaging data. Neuroimage. PMID 29253653 DOI: 10.1016/j.neuroimage.2017.12.042 |
0.442 |
|
2017 |
Gahm JK, Shi Y. Holistic Mapping of Striatum Surfaces in the Laplace-Beltrami Embedding Space. Medical Image Computing and Computer-Assisted Intervention : Miccai ... International Conference On Medical Image Computing and Computer-Assisted Intervention. 10433: 21-30. PMID 29046902 DOI: 10.1007/978-3-319-66182-7_3 |
0.304 |
|
2017 |
Wang J, Aydogan DB, Varma R, Toga AW, Shi Y. Topographic Regularity for Tract Filtering in Brain Connectivity. Information Processing in Medical Imaging : Proceedings of the ... Conference. 10265: 263-274. PMID 28943732 DOI: 10.1007/978-3-319-59050-9_21 |
0.443 |
|
2016 |
Gahm JK, Shi Y. Riemannian Metric Optimization for Connectivity-driven Surface Mapping. Medical Image Computing and Computer-Assisted Intervention : Miccai ... International Conference On Medical Image Computing and Computer-Assisted Intervention. 9900: 228-236. PMID 28083569 DOI: 10.1007/978-3-319-46720-7_27 |
0.322 |
|
2016 |
Li J, Gahm JK, Shi Y, Toga AW. Topological false discovery rates for brain mapping based on signal height. Neuroimage. PMID 27838286 DOI: 10.1016/J.Neuroimage.2016.09.045 |
0.367 |
|
2016 |
Leng Y, Shi Y, Yu Q, Van Horn JD, Tang H, Li J, Xu W, Ge X, Tang Y, Han Y, Zhang D, Xiao M, Zhang H, Pang Z, Toga AW, et al. Phenotypic and Genetic Correlations Between the Lobar Segments of the Inferior Fronto-occipital Fasciculus and Attention. Scientific Reports. 6: 33015. PMID 27597294 DOI: 10.1038/srep33015 |
0.305 |
|
2016 |
Li J, Shi Y, Toga AW. Mapping Brain Anatomical Connectivity Using Diffusion Magnetic Resonance Imaging: Structural connectivity of the human brain. Ieee Signal Processing Magazine. 33: 36-51. PMID 27212872 DOI: 10.1109/MSP.2015.2510024 |
0.425 |
|
2016 |
Li J, Shi Y, Toga AW. Transformation Invariant Control of Voxel-Wise False Discovery Rate. Ieee Transactions On Medical Imaging. PMID 27101602 DOI: 10.1109/TMI.2016.2554554 |
0.402 |
|
2015 |
Kammen A, Law M, Tjan BS, Toga AW, Shi Y. Automated Retinofugal Visual Pathway Reconstruction with Multi-shell HARDI and FOD-based Analysis. Neuroimage. PMID 26551261 DOI: 10.1016/j.neuroimage.2015.11.005 |
0.393 |
|
2015 |
Li J, Shi Y, Toga AW. Controlling False Discovery Rate in Signal Space for Transformation-Invariant Thresholding of Statistical Maps. Information Processing in Medical Imaging : Proceedings of the ... Conference. 24: 125-36. PMID 26213450 DOI: 10.1007/978-3-319-19992-4_10 |
0.406 |
|
2015 |
Ge X, Shi Y, Li J, Zhang Z, Lin X, Zhan J, Ge H, Xu J, Yu Q, Leng Y, Teng G, Feng L, Meng H, Tang Y, Zang F, et al. Development of the human fetal hippocampal formation during early second trimester. Neuroimage. PMID 26123377 DOI: 10.1016/j.neuroimage.2015.06.055 |
0.375 |
|
2014 |
Shi Y, Li J, Toga AW. Persistent Reeb Graph Matching for Fast Brain Search. Machine Learning in Medical Imaging. Mlmi (Workshop), Author. 8679: 306-313. PMID 25594076 DOI: 10.1007/978-3-319-10581-9_38 |
0.433 |
|
2014 |
Li J, Shi Y, Toga AW. ROTATIONAL GRADIENT FIELD FOR INTERPOLATION OF FIBER ORIENTATION DISTRIBUTION IN CONNECTIVITY ANALYSIS. Proceedings / Ieee International Symposium On Biomedical Imaging: From Nano to Macro. Ieee International Symposium On Biomedical Imaging. 2014: 1051-1054. PMID 25383160 DOI: 10.1109/ISBI.2014.6868054 |
0.442 |
|
2014 |
Li J, Shi Y, Toga AW. Diffusion of fiber orientation distribution functions with a rotation-induced riemannian metric. Medical Image Computing and Computer-Assisted Intervention : Miccai ... International Conference On Medical Image Computing and Computer-Assisted Intervention. 17: 249-56. PMID 25320806 DOI: 10.1007/978-3-319-10443-0_32 |
0.429 |
|
2014 |
Jin Y, Shi Y, Zhan L, Gutman BA, de Zubicaray GI, McMahon KL, Wright MJ, Toga AW, Thompson PM. Automatic clustering of white matter fibers in brain diffusion MRI with an application to genetics. Neuroimage. 100: 75-90. PMID 24821529 DOI: 10.1016/J.Neuroimage.2014.04.048 |
0.447 |
|
2014 |
Shi Y, Lai R, Wang DJ, Pelletier D, Mohr D, Sicotte N, Toga AW. Metric optimization for surface analysis in the Laplace-Beltrami embedding space. Ieee Transactions On Medical Imaging. 33: 1447-63. PMID 24686245 DOI: 10.1109/Tmi.2014.2313812 |
0.459 |
|
2014 |
Labus JS, Dinov ID, Jiang Z, Ashe-McNalley C, Zamanyan A, Shi Y, Hong JY, Gupta A, Tillisch K, Ebrat B, Hobel S, Gutman BA, Joshi S, Thompson PM, Toga AW, et al. Irritable bowel syndrome in female patients is associated with alterations in structural brain networks. Pain. 155: 137-49. PMID 24076048 DOI: 10.1016/J.Pain.2013.09.020 |
0.373 |
|
2014 |
Li J, Shi Y, Tran G, Dinov I, Wang DJ, Toga A. Fast local trust region technique for diffusion tensor registration using exact reorientation and regularization. Ieee Transactions On Medical Imaging. 33: 1005-22. PMID 23880040 DOI: 10.1109/Tmi.2013.2274051 |
0.414 |
|
2013 |
Li J, Shi Y, Dinov ID, Toga AW. Locally Weighted Multi-atlas Construction. Multimodal Brain Image Analysis : Third International Workshop, Mbia 2013, Held in Conjunction With Miccai 2013, Nagoya, Japan, September 22, 2013 : Proceedings / Li Shen, Tianming Liu, Pew-Thian Yap, Heng Huang, Dinggang Shen, Carl-Fre.... 8159: 1-8. PMID 25392851 DOI: 10.1007/978-3-319-02126-3_1 |
0.394 |
|
2013 |
Shi Y, Lai R, Toga AW. Conformal mapping via metric optimization with application for cortical label fusion. Information Processing in Medical Imaging : Proceedings of the ... Conference. 23: 244-55. PMID 24683973 DOI: 10.1007/978-3-642-38868-2_21 |
0.446 |
|
2013 |
Li J, Jin Y, Shi Y, Dinov ID, Wang DJ, Toga AW, Thompson PM. Voxelwise spectral diffusional connectivity and its applications to Alzheimer's disease and intelligence prediction. Medical Image Computing and Computer-Assisted Intervention : Miccai ... International Conference On Medical Image Computing and Computer-Assisted Intervention. 16: 655-62. PMID 24505723 DOI: 10.1007/978-3-642-40811-3_82 |
0.409 |
|
2013 |
Jiang Z, Dinov ID, Labus J, Shi Y, Zamanyan A, Gupta A, Ashe-McNalley C, Hong JY, Tillisch K, Toga AW, Mayer EA. Sex-related differences of cortical thickness in patients with chronic abdominal pain. Plos One. 8: e73932. PMID 24040118 DOI: 10.1371/Journal.Pone.0073932 |
0.347 |
|
2013 |
Zhan J, Dinov ID, Li J, Zhang Z, Hobel S, Shi Y, Lin X, Zamanyan A, Feng L, Teng G, Fang F, Tang Y, Zang F, Toga AW, Liu S. Spatial-temporal atlas of human fetal brain development during the early second trimester. Neuroimage. 82: 115-26. PMID 23727529 DOI: 10.1016/j.neuroimage.2013.05.063 |
0.434 |
|
2013 |
Shi Y, Lai R, Toga AW. Cortical surface reconstruction via unified Reeb analysis of geometric and topological outliers in magnetic resonance images. Ieee Transactions On Medical Imaging. 32: 511-30. PMID 23086519 DOI: 10.1109/Tmi.2012.2224879 |
0.466 |
|
2012 |
Li J, Shi Y, Tran G, Dinov I, Wang DJ, Toga AW. Fast diffusion tensor registration with exact reorientation and regularization. Medical Image Computing and Computer-Assisted Intervention : Miccai ... International Conference On Medical Image Computing and Computer-Assisted Intervention. 15: 138-45. PMID 23286042 |
0.413 |
|
2012 |
Shi Y, Lai R, Toga AW. Unified geometry and topology correction for cortical surface reconstruction with intrinsic reeb analysis. Medical Image Computing and Computer-Assisted Intervention : Miccai ... International Conference On Medical Image Computing and Computer-Assisted Intervention. 15: 601-8. PMID 23285601 |
0.426 |
|
2011 |
Jin Y, Shi Y, Joshi SH, Jahanshad N, Zhan L, de Zubicaray GI, McMahon KL, Martin NG, Wright MJ, Toga AW, Thompson PM. Heritability of White Matter Fiber Tract Shapes: A HARDI Study of 198 Twins. Multimodal Brain Image Analysis : First International Workshop, Mbia 2011, Held in Conjunction With Miccai 2011, Toronto, Canada, September 18, 2011 : Proceedings / Tianming Liu ... [Et Al.], (Eds.). 2011: 35-43. PMID 25346947 DOI: 10.1007/978-3-642-24446-9_5 |
0.448 |
|
2011 |
Shi Y, Lai R, Gill R, Pelletier D, Mohr D, Sicotte N, Toga AW. Conformal metric optimization on surface (CMOS) for deformation and mapping in Laplace-Beltrami embedding space. Medical Image Computing and Computer-Assisted Intervention : Miccai ... International Conference On Medical Image Computing and Computer-Assisted Intervention. 14: 327-34. PMID 21995045 |
0.426 |
|
2011 |
Shi Y, Lai R, Toga AW. CoRPORATE: cortical reconstruction by pruning outliers with Reeb analysis and topology-preserving evolution. Information Processing in Medical Imaging : Proceedings of the ... Conference. 22: 233-44. PMID 21761660 |
0.444 |
|
2011 |
Costafreda SG, Dinov ID, Tu Z, Shi Y, Liu CY, Kloszewska I, Mecocci P, Soininen H, Tsolaki M, Vellas B, Wahlund LO, Spenger C, Toga AW, Lovestone S, Simmons A. Automated hippocampal shape analysis predicts the onset of dementia in mild cognitive impairment. Neuroimage. 56: 212-9. PMID 21272654 DOI: 10.1016/J.Neuroimage.2011.01.050 |
0.331 |
|
2010 |
Shi Y, Sun B, Lai R, Dinov I, Toga AW. Automated sulci identification via intrinsic modeling of cortical anatomy. Medical Image Computing and Computer-Assisted Intervention : Miccai ... International Conference On Medical Image Computing and Computer-Assisted Intervention. 13: 49-56. PMID 20879382 DOI: 10.1007/978-3-642-15711-0_7 |
0.439 |
|
2010 |
Shi Y, Lai R, Morra JH, Dinov I, Thompson PM, Toga AW. Robust surface reconstruction via Laplace-Beltrami eigen-projection and boundary deformation. Ieee Transactions On Medical Imaging. 29: 2009-22. PMID 20624704 DOI: 10.1109/Tmi.2010.2057441 |
0.397 |
|
2010 |
Patel V, Shi Y, Thompson PM, Toga AW. Mesh-based spherical deconvolution: a flexible approach to reconstruction of non-negative fiber orientation distributions. Neuroimage. 51: 1071-81. PMID 20206705 DOI: 10.1016/J.Neuroimage.2010.02.060 |
0.395 |
|
2009 |
Lai R, Shi Y, Dinov I, Chan TF, Toga AW. LAPLACE-BELTRAMI NODAL COUNTS: A NEW SIGNATURE FOR 3D SHAPE ANALYSIS. Proceedings / Ieee International Symposium On Biomedical Imaging: From Nano to Macro. Ieee International Symposium On Biomedical Imaging. 2009: 694-697. PMID 21339849 DOI: 10.1109/ISBI.2009.5193142 |
0.344 |
|
2009 |
Shi Y, Dinov I, Toga AW. Cortical shape analysis in the Laplace-Beltrami feature space. Medical Image Computing and Computer-Assisted Intervention : Miccai ... International Conference On Medical Image Computing and Computer-Assisted Intervention. 12: 208-15. PMID 20426114 DOI: 10.1007/978-3-642-04271-3_26 |
0.39 |
|
2009 |
Shi Y, Morra JH, Thompson PM, Toga AW. Inverse-consistent surface mapping with Laplace-Beltrami eigen-features. Information Processing in Medical Imaging : Proceedings of the ... Conference. 21: 467-78. PMID 19694286 DOI: 10.1007/978-3-642-02498-6_39 |
0.435 |
|
2009 |
Leporé N, Shi Y, Lepore F, Fortin M, Voss P, Chou YY, Lord C, Lassonde M, Dinov ID, Toga AW, Thompson PM. Pattern of hippocampal shape and volume differences in blind subjects. Neuroimage. 46: 949-57. PMID 19285559 DOI: 10.1016/J.Neuroimage.2009.01.071 |
0.431 |
|
2009 |
Shi Y, Tu Z, Reiss AL, Dutton RA, Lee AD, Galaburda AM, Dinov I, Thompson PM, Toga AW. Joint sulcal detection on cortical surfaces with graphical models and boosted priors. Ieee Transactions On Medical Imaging. 28: 361-73. PMID 19244008 DOI: 10.1109/Tmi.2008.2004402 |
0.406 |
|
2008 |
Shi Y, Lai R, Krishna S, Sicotte N, Dinov I, Toga AW. Anisotropic Laplace-Beltrami Eigenmaps: Bridging Reeb Graphs and Skeletons. Proceedings / Cvpr, Ieee Computer Society Conference On Computer Vision and Pattern Recognition. Ieee Computer Society Conference On Computer Vision and Pattern Recognition. 2008: 1-7. PMID 21339850 DOI: 10.1109/CVPRW.2008.4563018 |
0.377 |
|
2008 |
Shi Y, Lai R, Kern K, Sicotte N, Dinov I, Toga AW. Harmonic surface mapping with Laplace-Beltrami eigenmaps. Medical Image Computing and Computer-Assisted Intervention : Miccai ... International Conference On Medical Image Computing and Computer-Assisted Intervention. 11: 147-54. PMID 18982600 DOI: 10.1007/978-3-540-85990-1_18 |
0.441 |
|
2007 |
Shi Y, Tu Z, Reiss AL, Dutton RA, Lee AD, Galaburda AM, Dinov I, Thompson PM, Toga AW. Joint sulci detection using graphical models and boosted priors. Information Processing in Medical Imaging : Proceedings of the ... Conference. 20: 98-109. PMID 17633692 DOI: 10.1007/978-3-540-73273-0_9 |
0.396 |
|
2007 |
Shi Y, Thompson PM, de Zubicaray GI, Rose SE, Tu Z, Dinov I, Toga AW. Direct mapping of hippocampal surfaces with intrinsic shape context. Neuroimage. 37: 792-807. PMID 17625918 DOI: 10.1016/J.Neuroimage.2007.05.016 |
0.443 |
|
2007 |
Shi Y, Thompson PM, Dinov I, Osher S, Toga AW. Direct cortical mapping via solving partial differential equations on implicit surfaces. Medical Image Analysis. 11: 207-23. PMID 17379568 DOI: 10.1016/J.Media.2007.02.001 |
0.416 |
|
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