Jonathan Flint - Publications

Affiliations: 
WTCHG, University of Oxford  

59 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Border R, Athanasiadis G, Buil A, Schork AJ, Cai N, Young AI, Werge T, Flint J, Kendler KS, Sankararaman S, Dahl AW, Zaitlen NA. Cross-trait assortative mating is widespread and inflates genetic correlation estimates. Science (New York, N.Y.). 378: 754-761. PMID 36395242 DOI: 10.1126/science.abo2059  0.328
2021 Zou J, Gopalakrishnan S, Parker CC, Nicod J, Mott R, Cai N, Lionikas A, Davies RW, Palmer AA, Flint J. Analysis of independent cohorts of outbred CFW mice reveals novel loci for behavioral and physiological traits and identifies factors determining reproducibility. G3 (Bethesda, Md.). PMID 34791208 DOI: 10.1093/g3journal/jkab394  0.404
2020 Chatzinakos C, Georgiadis F, Lee D, Cai N, Vladimirov VI, Docherty A, Webb BT, Riley BP, Flint J, Kendler KS, Daskalakis NP, Bacanu SA. TWAS pathway method greatly enhances the number of leads for uncovering the molecular underpinnings of psychiatric disorders. American Journal of Medical Genetics. Part B, Neuropsychiatric Genetics : the Official Publication of the International Society of Psychiatric Genetics. PMID 32954640 DOI: 10.1002/Ajmg.B.32823  0.31
2020 Cai N, Revez JA, Adams MJ, Andlauer TFM, Breen G, Byrne EM, Clarke TK, Forstner AJ, Grabe HJ, Hamilton SP, Levinson DF, Lewis CM, Lewis G, Martin NG, Milaneschi Y, ... ... Flint J, et al. Minimal phenotyping yields genome-wide association signals of low specificity for major depression. Nature Genetics. PMID 32231276 DOI: 10.1038/S41588-020-0594-5  0.314
2019 Dahl A, Cai N, Ko A, Laakso M, Pajukanta P, Flint J, Zaitlen N. Reverse GWAS: Using genetics to identify and model phenotypic subtypes. Plos Genetics. 15: e1008009. PMID 30951530 DOI: 10.1371/Journal.Pgen.1008009  0.322
2018 Weissbrod O, Flint J, Rosset S. Estimating SNP-Based Heritability and Genetic Correlation in Case-Control Studies Directly and with Summary Statistics. American Journal of Human Genetics. 103: 89-99. PMID 29979983 DOI: 10.1016/J.Ajhg.2018.06.002  0.307
2016 Peterson RE, Cai N, Bigdeli TB, Li Y, Reimers M, Nikulova A, Webb BT, Bacanu SA, Riley BP, Flint J, Kendler KS. The Genetic Architecture of Major Depressive Disorder in Han Chinese Women. Jama Psychiatry. PMID 28002544 DOI: 10.1001/Jamapsychiatry.2016.3578  0.315
2016 Nicod J, Davies RW, Cai N, Hassett C, Goodstadt L, Cosgrove C, Yee BK, Lionikaite V, McIntyre RE, Remme CA, Lodder EM, Gregory JS, Hough T, Joynson R, Phelps H, ... ... Flint J, et al. Genome-wide association of multiple complex traits in outbred mice by ultra-low-coverage sequencing. Nature Genetics. PMID 27376238 DOI: 10.1038/Ng.3595  0.353
2016 Gage SH, Davey Smith G, Ware JJ, Flint J, Munafò MR. G = E: What GWAS Can Tell Us about the Environment. Plos Genetics. 12: e1005765. PMID 26866486 DOI: 10.1371/journal.pgen.1005765  0.317
2014 Munafò MR, Flint J. The genetic architecture of psychophysiological phenotypes Psychophysiology. 51: 1331-1332. PMID 25387716 DOI: 10.1111/psyp.12355  0.361
2014 Flint J, Timpson N, Munafò M. Assessing the utility of intermediate phenotypes for genetic mapping of psychiatric disease Trends in Neurosciences. 37: 733-741. PMID 25216981 DOI: 10.1016/j.tins.2014.08.007  0.349
2014 Krohn J, Speed D, Palme R, Touma C, Mott R, Flint J. Genetic interactions with sex make a relatively small contribution to the heritability of complex traits in mice. Plos One. 9: e96450. PMID 24811081 DOI: 10.1371/Journal.Pone.0096450  0.419
2014 Flint J, Kendler KS. The genetics of major depression. Neuron. 81: 484-503. PMID 24507187 DOI: 10.1016/j.neuron.2014.01.027  0.332
2013 White JK, Gerdin AK, Karp NA, Ryder E, Buljan M, Bussell JN, Salisbury J, Clare S, Ingham NJ, Podrini C, Houghton R, Estabel J, Bottomley JR, Melvin DG, Sunter D, ... ... Flint J, et al. Genome-wide generation and systematic phenotyping of knockout mice reveals new roles for many genes. Cell. 154: 452-64. PMID 23870131 DOI: 10.1016/J.Cell.2013.06.022  0.312
2013 Baud A, Calderari S, Mott R, Flint J, Gauguier D. [Genome sequencing and genetic mapping to dissect the genetic basis of complex traits]. MéDecine Sciences : M/S. 29: 671-4. PMID 23859526 DOI: 10.1051/Medsci/2013296024  0.352
2013 Mott R, Flint J. Dissecting quantitative traits in mice. Annual Review of Genomics and Human Genetics. 14: 421-39. PMID 23834320 DOI: 10.1146/Annurev-Genom-091212-153419  0.412
2013 Baud A, Hermsen R, Guryev V, Stridh P, Graham D, McBride MW, Foroud T, Calderari S, Diez M, Ockinger J, Beyeen AD, Gillett A, Abdelmagid N, Guerreiro-Cacais AO, ... ... Flint J, et al. Combined sequence-based and genetic mapping analysis of complex traits in outbred rats. Nature Genetics. 45: 767-75. PMID 23708188 DOI: 10.1038/Ng.2644  0.417
2013 Flint J, Munafò MR. Candidate and non-candidate genes in behavior genetics Current Opinion in Neurobiology. 23: 57-61. PMID 22878161 DOI: 10.1016/j.conb.2012.07.005  0.337
2012 Goodson M, Rust MB, Witke W, Bannerman D, Mott R, Ponting CP, Flint J. Cofilin-1: a modulator of anxiety in mice. Plos Genetics. 8: e1002970. PMID 23055942 DOI: 10.1371/Journal.Pgen.1002970  0.348
2012 Flint J, Eskin E. Genome-wide association studies in mice. Nature Reviews. Genetics. 13: 807-17. PMID 23044826 DOI: 10.1038/Nrg3335  0.334
2011 Yalcin B, Wong K, Agam A, Goodson M, Keane TM, Gan X, Nellåker C, Goodstadt L, Nicod J, Bhomra A, Hernandez-Pliego P, Whitley H, Cleak J, Dutton R, Janowitz D, ... ... Flint J, et al. Sequence-based characterization of structural variation in the mouse genome. Nature. 477: 326-9. PMID 21921916 DOI: 10.1038/Nature10432  0.336
2011 Keane TM, Goodstadt L, Danecek P, White MA, Wong K, Yalcin B, Heger A, Agam A, Slater G, Goodson M, Furlotte NA, Eskin E, NellÃ¥ker C, Whitley H, Cleak J, ... ... Flint J, et al. Mouse genomic variation and its effect on phenotypes and gene regulation. Nature. 477: 289-94. PMID 21921910 DOI: 10.1038/Nature10413  0.329
2011 Hettema JM, Webb BT, Guo AY, Zhao Z, Maher BS, Chen X, An SS, Sun C, Aggen SH, Kendler KS, Kuo PH, Otowa T, Flint J, van den Oord EJ. Prioritization and association analysis of murine-derived candidate genes in anxiety-spectrum disorders. Biological Psychiatry. 70: 888-96. PMID 21871609 DOI: 10.1016/J.Biopsych.2011.07.012  0.359
2011 Ahlqvist E, Ekman D, Lindvall T, Popovic M, Förster M, Hultqvist M, Klaczkowska D, Teneva I, Johannesson M, Flint J, Valdar W, Nandakumar KS, Holmdahl R. High-resolution mapping of a complex disease, a model for rheumatoid arthritis, using heterogeneous stock mice Human Molecular Genetics. 20: 3031-3041. PMID 21565963 DOI: 10.1093/Hmg/Ddr206  0.348
2011 Johnsen AK, Valdar W, Golden L, Ortiz-Lopez A, Hitzemann R, Flint J, Mathis D, Benoist C. Genome-wide and species-wide dissection of the genetics of arthritis severity in heterogeneous stock mice. Arthritis and Rheumatism. 63: 2630-40. PMID 21560115 DOI: 10.1002/Art.30425  0.333
2011 Flint J. Mapping quantitative traits and strategies to find quantitative trait genes Methods. 53: 163-174. PMID 20643209 DOI: 10.1016/j.ymeth.2010.07.007  0.317
2010 Yalcin B, Nicod J, Bhomra A, Davidson S, Cleak J, Farinelli L, ØsterÃ¥s M, Whitley A, Yuan W, Gan X, Goodson M, Klenerman P, Satpathy A, Mathis D, Benoist C, ... ... Flint J, et al. Commercially available outbred mice for genome-wide association studies. Plos Genetics. 6: e1001085. PMID 20838427 DOI: 10.1371/Journal.Pgen.1001085  0.392
2009 Cox A, Ackert-Bicknell CL, Dumont BL, Ding Y, Bell JT, Brockmann GA, Wergedal JE, Bult C, Paigen B, Flint J, Tsaih SW, Churchill GA, Broman KW. A new standard genetic map for the laboratory mouse. Genetics. 182: 1335-44. PMID 19535546 DOI: 10.1534/Genetics.109.105486  0.355
2009 Flint J, Mackay TF. Genetic architecture of quantitative traits in mice, flies, and humans. Genome Research. 19: 723-33. PMID 19411597 DOI: 10.1101/gr.086660.108  0.419
2009 Huang GJ, Shifman S, Valdar W, Johannesson M, Yalcin B, Taylor MS, Taylor JM, Mott R, Flint J. High resolution mapping of expression QTLs in heterogeneous stock mice in multiple tissues. Genome Research. 19: 1133-40. PMID 19376938 DOI: 10.1101/Gr.088120.108  0.403
2009 Johannesson M, Lopez-Aumatell R, Stridh P, Diez M, Tuncel J, Blázquez G, Martinez-Membrives E, Cañete T, Vicens-Costa E, Graham D, Copley RR, Hernandez-Pliego P, Beyeen AD, Ockinger J, Fernández-Santamaría C, ... ... Flint J, et al. A resource for the simultaneous high-resolution mapping of multiple quantitative trait loci in rats: the NIH heterogeneous stock. Genome Research. 19: 150-8. PMID 18971309 DOI: 10.1101/Gr.081497.108  0.356
2008 Flint J, Mott R. Applying mouse complex-trait resources to behavioural genetics. Nature. 456: 724-7. PMID 19079048 DOI: 10.1038/Nature07630  0.301
2008 Flint J, Shifman S, Munafo M, Mott R. Genetic variants in major depression. Novartis Foundation Symposium. 289: 23-32; discussion 33. PMID 18497093 DOI: 10.1002/9780470751251.Ch3  0.337
2008 Mott R, Flint J. Prospects for complex trait analysis in the mouse. Mammalian Genome : Official Journal of the International Mammalian Genome Society. 19: 306-8. PMID 18493822 DOI: 10.1007/S00335-008-9110-4  0.377
2008 Fullerton JM, Willis-Owen SA, Yalcin B, Shifman S, Copley RR, Miller SR, Bhomra A, Davidson S, Oliver PL, Mott R, Flint J. Human-mouse quantitative trait locus concordance and the dissection of a human neuroticism locus. Biological Psychiatry. 63: 874-83. PMID 18083140 DOI: 10.1016/J.Biopsych.2007.10.019  0.588
2006 Shifman S, Bell JT, Copley RR, Taylor MS, Williams RW, Mott R, Flint J. A high-resolution single nucleotide polymorphism genetic map of the mouse genome. Plos Biology. 4: e395. PMID 17105354 DOI: 10.1371/Journal.Pbio.0040395  0.369
2006 Valdar W, Solberg LC, Gauguier D, Cookson WO, Rawlins JN, Mott R, Flint J. Genetic and environmental effects on complex traits in mice. Genetics. 174: 959-84. PMID 16888333 DOI: 10.1534/Genetics.106.060004  0.342
2006 Valdar W, Solberg LC, Gauguier D, Burnett S, Klenerman P, Cookson WO, Taylor MS, Rawlins JN, Mott R, Flint J. Genome-wide genetic association of complex traits in heterogeneous stock mice. Nature Genetics. 38: 879-87. PMID 16832355 DOI: 10.1038/Ng1840  0.43
2006 Aitman TJ, Dong R, Vyse TJ, Norsworthy PJ, Johnson MD, Smith J, Mangion J, Roberton-Lowe C, Marshall AJ, Petretto E, Hodges MD, Bhangal G, Patel SG, Sheehan-Rooney K, Duda M, ... ... Flint J, et al. Copy number polymorphism in Fcgr3 predisposes to glomerulonephritis in rats and humans. Nature. 439: 851-5. PMID 16482158 DOI: 10.1038/nature04489  0.301
2006 Solberg LC, Valdar W, Gauguier D, Nunez G, Taylor A, Burnett S, Arboledas-Hita C, Hernandez-Pliego P, Davidson S, Burns P, Bhattacharya S, Hough T, Higgs D, Klenerman P, Cookson WO, ... ... Flint J, et al. A protocol for high-throughput phenotyping, suitable for quantitative trait analysis in mice. Mammalian Genome : Official Journal of the International Mammalian Genome Society. 17: 129-46. PMID 16465593 DOI: 10.1007/S00335-005-0112-1  0.396
2005 Willis-Owen SA, Fullerton J, Surtees PG, Wainwright NW, Miller S, Flint J. The Val66Met coding variant of the brain-derived neurotrophic factor (BDNF) gene does not contribute toward variation in the personality trait neuroticism. Biological Psychiatry. 58: 738-42. PMID 16043130 DOI: 10.1016/j.biopsych.2005.05.014  0.514
2005 Flint J, Valdar W, Shifman S, Mott R. Strategies for mapping and cloning quantitative trait genes in rodents. Nature Reviews. Genetics. 6: 271-86. PMID 15803197 DOI: 10.1038/Nrg1576  0.347
2005 Khoo JP, Nicoli T, Alp NJ, Fullerton J, Flint J, Channon KM. Congenic mapping and genotyping of the tetrahydrobiopterin-deficient hph-1 mouse. Molecular Genetics and Metabolism. 82: 251-4. PMID 15234340 DOI: 10.1016/J.YMGME.2004.04.006  0.512
2004 Yalcin B, Willis-Owen SA, Fullerton J, Meesaq A, Deacon RM, Rawlins JN, Copley RR, Morris AP, Flint J, Mott R. Genetic dissection of a behavioral quantitative trait locus shows that Rgs2 modulates anxiety in mice. Nature Genetics. 36: 1197-202. PMID 15489855 DOI: 10.1038/Ng1450  0.584
2004 Flint J. The genetic basis of neuroticism Neuroscience and Biobehavioral Reviews. 28: 307-316. PMID 15225973 DOI: 10.1016/j.neubiorev.2004.01.004  0.368
2004 Flint J, DeFries JC, Henderson ND. Little epistasis for anxiety-related measures in the DeFries strains of laboratory mice. Mammalian Genome : Official Journal of the International Mammalian Genome Society. 15: 77-82. PMID 15058379 DOI: 10.1007/S00335-003-3033-X  0.338
2004 Turri MG, DeFries JC, Henderson ND, Flint J. Multivariate analysis of quantitative trait loci influencing variation in anxiety-related behavior in laboratory mice. Mammalian Genome : Official Journal of the International Mammalian Genome Society. 15: 69-76. PMID 15058378 DOI: 10.1007/S00335-003-3032-Y  0.373
2004 Henderson ND, Turri MG, DeFries JC, Flint J. QTL analysis of multiple behavioral measures of anxiety in mice. Behavior Genetics. 34: 267-93. PMID 14990867 DOI: 10.1023/B:Bege.0000017872.25069.44  0.318
2003 Valdar WS, Flint J, Mott R. QTL fine-mapping with recombinant-inbred heterogeneous stocks and in vitro heterogeneous stocks. Mammalian Genome : Official Journal of the International Mammalian Genome Society. 14: 830-8. PMID 14724734 DOI: 10.1007/S00335-003-3021-1  0.314
2003 Hitzemann R, Malmanger B, Reed C, Lawler M, Hitzemann B, Coulombe S, Buck K, Rademacher B, Walter N, Polyakov Y, Sikela J, Gensler B, Burgers S, Williams RW, Manly K, ... Flint J, et al. A strategy for the integration of QTL, gene expression, and sequence analyses. Mammalian Genome : Official Journal of the International Mammalian Genome Society. 14: 733-47. PMID 14722723 DOI: 10.1007/S00335-003-2277-9  0.345
2003 Abiola O, Angel JM, Avner P, Bachmanov AA, Belknap JK, Bennett B, Blankenhorn EP, Blizard DA, Bolivar V, Brockmann GA, Buck KJ, Bureau JF, Casley WL, Chesler EJ, Cheverud JM, ... ... Flint J, et al. The nature and identification of quantitative trait loci: a community's view. Nature Reviews. Genetics. 4: 911-6. PMID 14634638 DOI: 10.1038/Nrg1206  0.336
2003 Talbot CJ, Radcliffe RA, Fullerton J, Hitzemann R, Wehner JM, Flint J. Fine scale mapping of a genetic locus for conditioned fear. Mammalian Genome : Official Journal of the International Mammalian Genome Society. 14: 223-30. PMID 12682774 DOI: 10.1007/S00335-002-3059-5  0.58
2003 Steinberger D, Reynolds DS, Ferris P, Lincoln R, Datta S, Stanley J, Paterson A, Dawson GR, Flint J. Genetic mapping of variation in spatial learning in the mouse Journal of Neuroscience. 23: 2426-2433. PMID 12657702  0.35
2003 Fullerton J, Cubin M, Tiwari H, Wang C, Bomhra A, Davidson S, Miller S, Fairburn C, Goodwin G, Neale MC, Fiddy S, Mott R, Allison DB, Flint J. Linkage analysis of extremely discordant and concordant sibling pairs identifies quantitative-trait loci that influence variation in the human personality trait neuroticism. American Journal of Human Genetics. 72: 879-90. PMID 12612864 DOI: 10.1086/374178  0.574
2003 Flint J. Animal models of anxiety and their molecular dissection Seminars in Cell and Developmental Biology. 14: 37-42. PMID 12524005 DOI: 10.1016/S1084-9521(02)00170-2  0.305
2003 Flint J. Analysis of quantitative trait loci that influence animal behavior Journal of Neurobiology. 54: 46-77. PMID 12486698 DOI: 10.1002/neu.10161  0.373
2002 Flint J. Genetic effects on an animal model of anxiety Febs Letters. 529: 131-134. PMID 12354625 DOI: 10.1016/S0014-5793(02)03190-3  0.356
2002 Mott R, Flint J. Simultaneous detection and fine mapping of quantitative trait loci in mice using heterogeneous stocks. Genetics. 160: 1609-18. PMID 11973314 DOI: 10.1093/genetics/160.4.1609  0.354
2002 Fernández-Teruel A, Escorihuela RM, Gray JA, Aguilar R, Gil L, Giménez-Llort L, Tobeña A, Bhomra A, Nicod A, Mott R, Driscoll P, Dawson GR, Flint J. A quantitative trait locus influencing anxiety in the laboratory rat. Genome Research. 12: 618-26. PMID 11932246 DOI: 10.1101/Gr.203402  0.375
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