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Uthpala I. Seneviratne, Ph.D. - Publications

Affiliations: 
2010 Chemistry University of Minnesota, Twin Cities, Minneapolis, MN 
Area:
Biochemistry, Organic Chemistry, Analytical Chemistry
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15/24 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Huang Z, Ogasawara D, Seneviratne UI, Cognetta AB, Am Ende CW, Nason DM, Lapham K, Litchfield J, Johnson DS, Cravatt BF. Global Portrait of Protein Targets of Metabolites of the Neurotoxic Compound BIA 10-2474. Acs Chemical Biology. PMID 30702848 DOI: 10.1021/Acschembio.8B01097  0.32
2017 Chang SC, Seneviratne UI, Wu J, Tretyakova NY, Essigmann JM. 1,3-Butadiene-induced adenine DNA adducts are genotoxic but only weakly mutagenic when replicated in Escherichia coli of various repair and replication backgrounds. Chemical Research in Toxicology. PMID 28394575 DOI: 10.1021/Acs.Chemrestox.7B00064  0.74
2016 Tillberg PW, Chen F, Piatkevich KD, Zhao Y, Yu CJ, English BP, Gao L, Martorell A, Suk HJ, Yoshida F, DeGennaro EM, Roossien DH, Gong G, Seneviratne U, Tannenbaum SR, et al. Protein-retention expansion microscopy of cells and tissues labeled using standard fluorescent proteins and antibodies. Nature Biotechnology. PMID 27376584 DOI: 10.1038/Nbt.3625  0.438
2016 Seneviratne U, Nott A, Bhat VB, Ravindra KC, Wishnok JS, Tsai LH, Tannenbaum SR. S-nitrosation of proteins relevant to Alzheimer's disease during early stages of neurodegeneration. Proceedings of the National Academy of Sciences of the United States of America. PMID 27035958 DOI: 10.1073/Pnas.1521318113  0.473
2014 Darby A, Lertpiriyapong K, Sarkar U, Seneviratne U, Park DS, Gamazon ER, Batchelder C, Cheung C, Buckley EM, Taylor NS, Shen Z, Tannenbaum SR, Wishnok JS, Fox JG. Cytotoxic and pathogenic properties of Klebsiella oxytoca isolated from laboratory animals. Plos One. 9: e100542. PMID 25057966 DOI: 10.1371/Journal.Pone.0100542  0.473
2014 Kowal EA, Seneviratne U, Wickramaratne S, Doherty KE, Cao X, Tretyakova N, Stone MP. Structures of exocyclic R,R- and S,S-N(6),N(6)-(2,3-dihydroxybutan-1,4-diyl)-2'-deoxyadenosine adducts induced by 1,2,3,4-diepoxybutane. Chemical Research in Toxicology. 27: 805-17. PMID 24741991 DOI: 10.1021/Tx400472P  0.638
2014 Kowal E, Seneviratne U, Wickramaratne S, Doherty K, Cao X, Tretyakova N, Stone M. Structure of Exocyclic R,R N6,N6-(2,3-Dihydroxy-1,4-butadiyl)-2'-Deoxyadenosine Adduct Induced by 1,2,3,4-Diepoxybutane in DNA Journal of Back and Musculoskeletal Rehabilitation. DOI: 10.2210/Pdb2Mhx/Pdb  0.654
2013 Kotandeniya D, Murphy D, Yan S, Park S, Seneviratne U, Koopmeiners JS, Pegg A, Kanugula S, Kassie F, Tretyakova N. Kinetics of O(6)-pyridyloxobutyl-2'-deoxyguanosine repair by human O(6)-alkylguanine DNA alkyltransferase. Biochemistry. 52: 4075-88. PMID 23683164 DOI: 10.1021/Bi4004952  0.666
2013 Seneviratne U, Godoy LC, Wishnok JS, Wogan GN, Tannenbaum SR. Mechanism-based triarylphosphine-ester probes for capture of endogenous RSNOs. Journal of the American Chemical Society. 135: 7693-704. PMID 23614769 DOI: 10.1021/Ja401565W  0.511
2012 Ye W, Seneviratne UI, Chao MW, Ravindra KC, Wogan GN, Tannenbaum SR, Skipper PL. Transimination of quinone imines: a mechanism for embedding exogenous redox activity into the nucleosome. Chemical Research in Toxicology. 25: 2627-9. PMID 23194336 DOI: 10.1021/Tx3004517  0.478
2012 Kotapati S, Maddukuri L, Wickramaratne S, Seneviratne U, Goggin M, Pence MG, Villalta P, Guengerich FP, Marnett L, Tretyakova N. Translesion synthesis across 1,N6-(2-hydroxy-3-hydroxymethylpropan-1,3-diyl)-2'-deoxyadenosine (1,N6-γ-HMHP-dA) adducts by human and archebacterial DNA polymerases. The Journal of Biological Chemistry. 287: 38800-11. PMID 22977231 DOI: 10.1074/Jbc.M112.396788  0.74
2011 Kotandeniya D, Murphy D, Seneviratne U, Guza R, Pegg A, Kanugula S, Tretyakova N. Mass spectrometry based approach to study the kinetics of O6-alkylguanine DNA alkyltransferase-mediated repair of O6-pyridyloxobutyl-2'-deoxyguanosine adducts in DNA. Chemical Research in Toxicology. 24: 1966-75. PMID 21913712 DOI: 10.1021/Tx2002993  0.73
2010 Seneviratne U, Antsypovich S, Dorr DQ, Dissanayake T, Kotapati S, Tretyakova N. DNA oligomers containing site-specific and stereospecific exocyclic deoxyadenosine adducts of 1,2,3,4-diepoxybutane: synthesis, characterization, and effects on DNA structure. Chemical Research in Toxicology. 23: 1556-67. PMID 20873715 DOI: 10.1021/Tx100146V  0.776
2010 Goggin M, Seneviratne U, Swenberg JA, Walker VE, Tretyakova N. Column switching HPLC-ESI(+)-MS/MS methods for quantitative analysis of exocyclic dA adducts in the DNA of laboratory animals exposed to 1,3-butadiene. Chemical Research in Toxicology. 23: 808-12. PMID 20229982 DOI: 10.1021/Tx900439W  0.771
2010 Seneviratne U, Antsypovich S, Goggin M, Dorr DQ, Guza R, Moser A, Thompson C, York DM, Tretyakova N. Exocyclic deoxyadenosine adducts of 1,2,3,4-diepoxybutane: synthesis, structural elucidation, and mechanistic studies. Chemical Research in Toxicology. 23: 118-33. PMID 19883087 DOI: 10.1021/Tx900312E  0.696
Low-probability matches (unlikely to be authored by this person)
2017 Gertsik N, Am Ende CW, Geoghegan KF, Nguyen C, Mukherjee P, Mente S, Seneviratne U, Johnson DS, Li YM. Mapping the Binding Site of BMS-708163 on γ-Secretase with Cleavable Photoprobes. Cell Chemical Biology. PMID 28065657 DOI: 10.1016/J.Chembiol.2016.12.006  0.297
2020 Field D, Lee W, Dutra JK, Serneo FSF, Oyer J, Xu H, Johnson DS, Seneviratne U. Fluorophosphonate-based degrader identifies degradable serine hydrolases by quantitative proteomics. Chembiochem : a European Journal of Chemical Biology. PMID 32501609 DOI: 10.1002/Cbic.202000253  0.278
2019 Scinto SL, Ekanayake O, Seneviratne UI, Pigga JE, Brannick SJ, Taylor MT, Liu J, Am Ende CW, Rozovsky S, Fox JM. Dual-Reactivity trans-Cyclooctenol Probes for Sulfenylation in Live Cells Enable Temporal Control via Bioorthogonal Quenching. Journal of the American Chemical Society. PMID 31246462 DOI: 10.1021/Jacs.9B01164  0.27
2019 Xu H, Jesson MI, Seneviratne UI, Lin TH, Sharif MN, Xue L, Nguyen C, Everley RA, Trujillo JI, Johnson DS, Point GR, Thorarensen A, Kilty I, Telliez JB. PF-06651600, a dual JAK3/TEC family kinase inhibitor. Acs Chemical Biology. PMID 31082193 DOI: 10.1021/Acschembio.9B00188  0.215
2019 van Bergeijk P, Seneviratne U, Aparicio-Prat E, Stanton R, Hasson SA. SRSF1 and PTBP1 are trans-acting factors that suppress the formation of a CD33 splicing isoform linked to Alzheimer's disease risk. Molecular and Cellular Biology. PMID 31208978 DOI: 10.1128/Mcb.00568-18  0.21
2020 Seneviratne U, Huang Z, Am Ende CW, Butler TW, Cleary L, Dresselhaus E, Evrard E, Fisher EL, Green ME, Helal CJ, Humphrey JM, Lanyon LF, Marconi M, Mukherjee P, Sciabola S, et al. Photoaffinity Labeling and Quantitative Chemical Proteomics Identify LXRβ as the Functional Target of Enhancers of Astrocytic apoE. Cell Chemical Biology. PMID 32997975 DOI: 10.1016/j.chembiol.2020.09.002  0.154
2021 Lee W, Huang Z, Am Ende CW, Seneviratne U. Protocol for clickable photoaffinity labeling and quantitative chemical proteomics. Star Protocols. 2: 100593. PMID 34169287 DOI: 10.1016/j.xpro.2021.100593  0.118
2020 Esquejo RM, Roqueta-Rivera M, Shao W, Phelan PE, Seneviratne U, Am Ende CW, Hershberger PM, Machamer CE, Espenshade PJ, Osborne TF. Dipyridamole Inhibits Lipogenic Gene Expression by Retaining SCAP-SREBP in the Endoplasmic Reticulum. Cell Chemical Biology. PMID 33096051 DOI: 10.1016/j.chembiol.2020.10.003  0.115
2021 Seneviratne U, Wickramaratne S, Kotandeniya D, Groehler AS, Geraghty RJ, Dreis C, Pujari SS, Tretyakova NY. Synthesis and biological evaluation of pyrrolidine-functionalized nucleoside analogs Medicinal Chemistry Research. 30: 483-499. DOI: 10.1007/S00044-021-02700-1  0.103
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