Ratul Chowdhury
Affiliations: | 2013 | Chemical Engineering | Jadavpur University, Kolkata, West Bengal, India |
| 2019 | Chemical Engineering | Pennsylvania State University, State College, PA, United States | |
| 2020-2022 | Harvard Medical School, Boston, MA, United States | ||
| 2022- | Chemical Engineering | Iowa State University, Ames, IA, United States |
Website:
https://chowdhurylab.github.io/Google:
"Ratul Chowdhury"Mean distance: (not calculated yet)
Parents
Sign in to add mentor| Costas Maranas | grad student | 2019 | Penn State | |
| (Computational redesign of protein channels, enzymes, and antibodies) | ||||
| Peter Sorger | post-doc | 2020-2022 | Harvard Medical School (Neurotree) | |
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Publications
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| Chowdhury R, Bouatta N, Biswas S, et al. (2022) Publisher Correction: Single-sequence protein structure prediction using a language model and deep learning. Nature Biotechnology. 40: 1692 |
| Chowdhury R, Bouatta N, Biswas S, et al. (2022) Single-sequence protein structure prediction using a language model and deep learning. Nature Biotechnology |
| Boorla VS, Chowdhury R, Ramasubramanian R, et al. (2022) De novo design and Rosetta-based assessment of high-affinity antibody variable regions (Fv) against the SARS-CoV-2 spike receptor binding domain (RBD). Proteins |
| Chen C, Boorla VS, Chowdhury R, et al. (2022) A CNN model for predicting binding affinity changes between SARS-CoV-2 spike RBD variants and ACE2 homologues. Biorxiv : the Preprint Server For Biology |
| Chen C, Boorla VS, Banerjee D, et al. (2021) Computational prediction of the effect of amino acid changes on the binding affinity between SARS-CoV-2 spike RBD and human ACE2. Proceedings of the National Academy of Sciences of the United States of America. 118 |
| Patiño-Galindo JÁ, Filip I, Chowdhury R, et al. (2021) Recombination and lineage-specific mutations linked to the emergence of SARS-CoV-2. Genome Medicine. 13: 124 |
| Wang Z, Doshi A, Chowdhury R, et al. (2020) Engineering sensitivity and specificity of AraC-based biosensors responsive to triacetic acid lactone and orsellinic acid. Protein Engineering, Design & Selection : Peds. 33 |
| Chowdhury R, Boorla VS, Maranas CD. (2020) Computational biophysical characterization of the SARS-CoV-2 spike protein binding with the ACE2 receptor and implications for infectivity. Computational and Structural Biotechnology Journal. 18: 2573-2582 |
| Chowdhury R, Grisewood MJ, Boorla VS, et al. (2020) IPRO+/-: Computational Protein Design Tool Allowing for Insertions and Deletions. Structure (London, England : 1993) |
| Song W, Joshi H, Chowdhury R, et al. (2020) Author Correction: Artificial water channels enable fast and selective water permeation through water-wire networks. Nature Nanotechnology |