Roberto Feuda, Ph.D - Publications

Affiliations: 
2019- Genetics and Genome Biology University of Leicester (UK) 
Area:
phylogeny, evo-devo, systems biology

28 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Aleotti A, Goulty M, Lewis C, Giorgini F, Feuda R. The origin, evolution, and molecular diversity of the chemokine system. Life Science Alliance. 7. PMID 38228369 DOI: 10.26508/lsa.202302471  0.733
2024 Yu D, Ren Y, Uesaka M, Beavan AJS, Muffato M, Shen J, Li Y, Sato I, Wan W, Clark JW, Keating JN, Carlisle EM, Dearden RP, Giles S, Randle E, ... ... Feuda R, et al. Hagfish genome elucidates vertebrate whole-genome duplication events and their evolutionary consequences. Nature Ecology & Evolution. PMID 38216617 DOI: 10.1038/s41559-023-02299-z  0.743
2023 Zadra N, Tatti A, Silverj A, Piccinno R, Devilliers J, Lewis C, Arnoldi D, Montarsi F, Escuer P, Fusco G, De Sanctis V, Feuda R, Sánchez-Gracia A, Rizzoli A, Rota-Stabelli O. Shallow Whole-Genome Sequencing of and from Italy and an Updated Picture of Their Evolution Based on Mitogenomics and Barcoding. Insects. 14. PMID 38132578 DOI: 10.3390/insects14120904  0.789
2023 Rzasa P, Whelan S, Farahmand P, Cai H, Guterman I, Palacios-Gallego R, Undru SS, Sandford L, Green C, Andreadi C, Mintseva M, Parrott E, Jin H, Hey F, Giblett S, ... Feuda R, et al. BRAF-mutated serrated colorectal neoplasia drives transcriptional activation of cholesterol metabolism. Communications Biology. 6: 962. PMID 37735514 DOI: 10.1038/s42003-023-05331-x  0.673
2023 Goulty M, Botton-Amiot G, Rosato E, Sprecher SG, Feuda R. The monoaminergic system is a bilaterian innovation. Nature Communications. 14: 3284. PMID 37280201 DOI: 10.1038/s41467-023-39030-2  0.743
2023 De Vivo G, Crocetta F, Ferretti M, Feuda R, D'Aniello S. Duplication and losses of opsin genes in lophotrochozoan evolution. Molecular Biology and Evolution. PMID 36947081 DOI: 10.1093/molbev/msad066  0.778
2022 Pisani D, Rossi ME, Marlétaz F, Feuda R. Phylogenomics: Is less more when using large-scale datasets? Current Biology : Cb. 32: R1340-R1342. PMID 36538883 DOI: 10.1016/j.cub.2022.11.019  0.79
2022 Giacomelli M, Rossi ME, Lozano-Fernandez J, Feuda R, Pisani D. Resolving tricky nodes in the tree of life through amino acid recoding. Iscience. 25: 105594. PMID 36458253 DOI: 10.1016/j.isci.2022.105594  0.778
2022 Feuda R, Peter IS. Homologous gene regulatory networks control development of apical organs and brains in Bilateria. Science Advances. 8: eabo2416. PMID 36322649 DOI: 10.1126/sciadv.abo2416  0.707
2022 Feuda R. The temporal dynamics of the sea urchin regulome. Biology Open. 11. PMID 36094151 DOI: 10.1242/bio.059216  0.699
2022 Feuda R, Menon AK, Göpfert MC. Rethinking opsins. Molecular Biology and Evolution. PMID 35143663 DOI: 10.1093/molbev/msac033  0.705
2021 Valencia JE, Feuda R, Mellott DO, Burke RD, Peter IS. Ciliary photoreceptors in sea urchin larvae indicate pan-deuterostome cell type conservation. Bmc Biology. 19: 257. PMID 34863182 DOI: 10.1186/s12915-021-01194-y  0.709
2021 Musser JM, Schippers KJ, Nickel M, Mizzon G, Kohn AB, Pape C, Ronchi P, Papadopoulos N, Tarashansky AJ, Hammel JU, Wolf F, Liang C, Hernández-Plaza A, Cantalapiedra CP, Achim K, ... ... Feuda R, et al. Profiling cellular diversity in sponges informs animal cell type and nervous system evolution. Science (New York, N.Y.). 374: 717-723. PMID 34735222 DOI: 10.1126/science.abj2949  0.697
2021 Feuda R, Goulty M, Zadra N, Gasparetti T, Rosato E, Pisani D, Rizzoli A, Segata N, Ometto L, Stabelli OR. Phylogenomics of opsin genes in Diptera reveals lineage-specific events and contrasting evolutionary dynamics in Anopheles and Drosophila. Genome Biology and Evolution. PMID 34270718 DOI: 10.1093/gbe/evab170  0.776
2020 Pisani D, Rota-Stabelli O, Feuda R. Sensory Neuroscience: A Taste for Light and the Origin of Animal Vision. Current Biology : Cb. 30: R773-R775. PMID 32634420 DOI: 10.1016/J.Cub.2020.05.009  0.787
2020 Almudi I, Vizueta J, Wyatt CDR, de Mendoza A, Marlétaz F, Firbas PN, Feuda R, Masiero G, Medina P, Alcaina-Caro A, Cruz F, Gómez-Garrido J, Gut M, Alioto TS, Vargas-Chavez C, et al. Genomic adaptations to aquatic and aerial life in mayflies and the origin of insect wings. Nature Communications. 11: 2631. PMID 32457347 DOI: 10.1038/S41467-020-16284-8  0.795
2020 Fleming JF, Feuda R, Roberts NW, Pisani D. A novel approach to investigate the effect of tree reconstruction artifacts in single gene analysis clarifies opsin evolution in non-bilaterian metazoans. Genome Biology and Evolution. PMID 32031627 DOI: 10.1093/Gbe/Evaa015  0.8
2017 Feuda R, Dohrmann M, Pett W, Philippe H, Rota-Stabelli O, Lartillot N, Wörheide G, Pisani D. Improved Modeling of Compositional Heterogeneity Supports Sponges as Sister to All Other Animals. Current Biology : Cb. 27: 3864-3870.e4. PMID 29199080 DOI: 10.1016/J.Cub.2017.11.008  0.784
2016 Xu P, Feuda R, Lu B, Xiao H, Graham RI, Wu K. Functional opsin retrogene in nocturnal moth. Mobile Dna. 7: 18. PMID 27777631 DOI: 10.1186/S13100-016-0074-8  0.778
2016 Feuda R, Marletaz F, Bentley MA, Holland PW. Conservation, duplication and divergence of five opsin genes in insect evolution. Genome Biology and Evolution. PMID 26865071 DOI: 10.1093/Gbe/Evw015  0.794
2016 Pisani D, Pett W, Dohrmann M, Feuda R, Rota-Stabelli O, Philippe H, Lartillot N, Wörheide G. Reply to Halanych et al.: Ctenophore misplacement is corroborated by independent datasets. Proceedings of the National Academy of Sciences of the United States of America. PMID 26862176 DOI: 10.1073/Pnas.1525718113  0.749
2015 Pisani D, Pett W, Dohrmann M, Feuda R, Rota-Stabelli O, Philippe H, Lartillot N, Wörheide G. Genomic data do not support comb jellies as the sister group to all other animals. Proceedings of the National Academy of Sciences of the United States of America. PMID 26621703 DOI: 10.1073/Pnas.1518127112  0.815
2015 Feuda R, Smith AB. Phylogenetic signal dissection identifies the root of starfishes. Plos One. 10: e0123331. PMID 25955729 DOI: 10.1371/Journal.Pone.0123331  0.755
2015 Feuda R, Bannikova AA, Zemlemerova ED, Di Febbraro M, Loy A, Hutterer R, Aloise G, Zykov AE, Annesi F, Colangelo P. Tracing the evolutionary history of the mole, Talpa europaea, through mitochondrial DNA phylogeography and species distribution modelling Biological Journal of the Linnean Society. 114: 495-512. DOI: 10.1111/Bij.12459  0.74
2015 Pisani D, Pett W, Dohrmann M, Feuda R, Rota-Stabelli O, Philippe H, Lartillot N, Wörheide G. Genomic data do not support comb jellies as the sister group to all other animals Proceedings of the National Academy of Sciences of the United States of America. 112: 15402-15407. DOI: 10.1073/pnas.1518127112/-/DCSupplemental  0.776
2014 Feuda R, Rota-Stabelli O, Oakley TH, Pisani D. The comb jelly opsins and the origins of animal phototransduction. Genome Biology and Evolution. 6: 1964-71. PMID 25062921 DOI: 10.1093/Gbe/Evu154  0.797
2012 Feuda R, Hamilton SC, McInerney JO, Pisani D. Metazoan opsin evolution reveals a simple route to animal vision. Proceedings of the National Academy of Sciences of the United States of America. 109: 18868-72. PMID 23112152 DOI: 10.1073/Pnas.1204609109  0.79
2012 Pisani D, Feuda R, Peterson KJ, Smith AB. Resolving phylogenetic signal from noise when divergence is rapid: a new look at the old problem of echinoderm class relationships. Molecular Phylogenetics and Evolution. 62: 27-34. PMID 21945533 DOI: 10.1016/J.Ympev.2011.08.028  0.792
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