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Jeremy Beaulieu - Publications

Affiliations: 
University of Tennessee, Knoxville, Knoxville, TN, United States 
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43 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Boyko JD, Hagen ER, Beaulieu JM, Vasconcelos T. The evolutionary responses of life-history strategies to climatic variability in flowering plants. The New Phytologist. PMID 37194450 DOI: 10.1111/nph.18971  0.76
2023 Boyko JD, O'Meara BC, Beaulieu JM. A novel method for jointly modeling the evolution of discrete and continuous traits. Evolution; International Journal of Organic Evolution. PMID 36723908 DOI: 10.1093/evolut/qpad002  0.766
2022 Boyko JD, Beaulieu JM. Reducing the biases in false correlations between discrete characters. Systematic Biology. PMID 36173613 DOI: 10.1093/sysbio/syac066  0.76
2022 Beaulieu JM, O'Meara BC. Fossils Do Not Substantially Improve, and May Even Harm, Estimates of Diversification Rate Heterogeneity. Systematic Biology. PMID 35861420 DOI: 10.1093/sysbio/syac049  0.687
2022 Vasconcelos T, O'Meara BC, Beaulieu JM. A flexible method for estimating tip diversification rates across a range of speciation and extinction scenarios. Evolution; International Journal of Organic Evolution. PMID 35661352 DOI: 10.1111/evo.14517  0.701
2022 Vasconcelos T, O'Meara BC, Beaulieu JM. Retiring "Cradles" and "Museums" of Biodiversity. The American Naturalist. 199: 194-205. PMID 35077278 DOI: 10.1086/717412  0.657
2020 Beaulieu JM, O'Meara BC, Gilchrist MA. A spatially-explicit model of stabilizing selection for improving phylogenetic inference. Molecular Biology and Evolution. PMID 33306127 DOI: 10.1093/molbev/msaa318  0.681
2020 Caetano DS, Beaulieu JM. Comparative Analyses of Phenotypic Sequences Using Phylogenetic Trees. The American Naturalist. 195: E38-E50. PMID 32017626 DOI: 10.1086/706912  0.715
2019 Howard CC, Landis JB, Beaulieu JM, Cellinese N. Geophytism in monocots leads to higher rates of diversification. The New Phytologist. PMID 31469440 DOI: 10.1111/nph.16155  0.344
2019 Nakov T, Beaulieu JM, Alverson AJ. Diatoms diversify and turn over faster in freshwater than marine environments. Evolution; International Journal of Organic Evolution. PMID 31429470 DOI: 10.1111/evo.13832  0.316
2019 Howard CC, Folk RA, Beaulieu JM, Cellinese N. The monocotyledonous underground: global climatic and phylogenetic patterns of geophyte diversity. American Journal of Botany. PMID 31106852 DOI: 10.1002/ajb2.1289  0.315
2019 Beaulieu JM, O'Meara BC. Diversity and skepticism are vital for comparative biology: a response to Donoghue and Edwards (2019). American Journal of Botany. PMID 31050366 DOI: 10.1002/Ajb2.1278  0.597
2018 Beaulieu JM, O'Meara BC, Zaretzki R, Landerer C, Chai J, Gilchrist MA. Population Genetics Based Phylogenetics Under Stabilizing Selection for an Optimal Amino Acid Sequence: A Nested Modeling Approach. Molecular Biology and Evolution. PMID 30521036 DOI: 10.1093/Molbev/Msy222  0.724
2018 Caetano DS, O'Meara BC, Beaulieu JM. Hidden state models improve state-dependent diversification approaches, including biogeographical models. Evolution; International Journal of Organic Evolution. PMID 30226270 DOI: 10.1111/Evo.13602  0.782
2018 Nakov T, Beaulieu JM, Alverson AJ. Insights into global planktonic diatom diversity: The importance of comparisons between phylogenetically equivalent units that account for time. The Isme Journal. PMID 30013161 DOI: 10.1038/s41396-018-0221-y  0.301
2018 Beaulieu JM, O'Meara BC. Can we build it? Yes we can, but should we use it? Assessing the quality and value of a very large phylogeny of campanulid angiosperms. American Journal of Botany. 105: 417-432. PMID 29746717 DOI: 10.1002/Ajb2.1020  0.612
2018 Nakov T, Beaulieu JM, Alverson AJ. Accelerated diversification is related to life history and locomotion in a hyperdiverse lineage of microbial eukaryotes (Diatoms, Bacillariophyta). The New Phytologist. PMID 29624698 DOI: 10.1111/nph.15137  0.314
2017 Nakov T, Boyko JD, Alverson AJ, Beaulieu JM. Models with unequal transition rates favor marine origins of Cyanobacteria and photosynthetic eukaryotes. Proceedings of the National Academy of Sciences of the United States of America. 114: E10606-E10607. PMID 29208725 DOI: 10.1073/Pnas.1716692114  0.763
2016 Cai L, Xi Z, Peterson K, Rushworth C, Beaulieu J, Davis CC. Phylogeny of Elatinaceae and the Tropical Gondwanan Origin of the Centroplacaceae(Malpighiaceae, Elatinaceae) Clade. Plos One. 11: e0161881. PMID 27684711 DOI: 10.1371/Journal.Pone.0161881  0.605
2016 O'Meara BC, Beaulieu JM. Past, future, and present of state-dependent models of diversification. American Journal of Botany. 103: 792-5. PMID 27208347 DOI: 10.3732/Ajb.1600012  0.635
2016 Beaulieu JM, O'Meara BC. Detecting hidden diversification shifts in models of trait-dependent speciation and extinction. Systematic Biology. PMID 27016728 DOI: 10.1093/sysbio/syw022  0.691
2015 Zanne AE, Tank DC, Cornwell WK, Eastman JM, Smith SA, FitzJohn RG, McGlinn DJ, O'Meara BC, Moles AT, Reich PB, Royer DL, Soltis DE, Stevens PF, Westoby M, Wright IJ, ... ... Beaulieu JM, et al. Zanne et al. reply. Nature. 521: E6-7. PMID 25993971 DOI: 10.1038/Nature14394  0.717
2015 Zanne AE, Tank DC, Cornwell WK, Eastman JM, Smith SA, FitzJohn RG, McGlinn DJ, O'Meara BC, Moles AT, Reich PB, Royer DL, Soltis DE, Stevens PF, Westoby M, Wright IJ, ... ... Beaulieu JM, et al. Corrigendum: Three keys to the radiation of angiosperms into freezing environments. Nature. 521: 380. PMID 25993966 DOI: 10.1038/Nature14371  0.734
2015 Beaulieu JM, O'Meara BC, Crane P, Donoghue MJ. Heterogeneous Rates of Molecular Evolution and Diversification Could Explain the Triassic Age Estimate for Angiosperms. Systematic Biology. PMID 25944476 DOI: 10.1093/Sysbio/Syv027  0.689
2015 Leslie AB, Beaulieu JM, Crane PR, Knopf P, Donoghue MJ. Integration and macroevolutionary patterns in the pollination biology of conifers. Evolution; International Journal of Organic Evolution. 69: 1573-83. PMID 25903435 DOI: 10.1111/Evo.12670  0.545
2015 Beaulieu JM, O'Meara BC. Extinction can be estimated from moderately sized molecular phylogenies. Evolution; International Journal of Organic Evolution. 69: 1036-43. PMID 25639334 DOI: 10.1111/Evo.12614  0.68
2014 Leslie AB, Beaulieu JM, Crane PR, Donoghue MJ. Cone size is related to branching architecture in conifers. The New Phytologist. 203: 1119-27. PMID 24889934 DOI: 10.1111/Nph.12864  0.536
2014 Zanne AE, Tank DC, Cornwell WK, Eastman JM, Smith SA, FitzJohn RG, McGlinn DJ, O'Meara BC, Moles AT, Reich PB, Royer DL, Soltis DE, Stevens PF, Westoby M, Wright IJ, ... ... Beaulieu JM, et al. Three keys to the radiation of angiosperms into freezing environments. Nature. 506: 89-92. PMID 24362564 DOI: 10.1038/Nature12872  0.787
2014 Cornwell WK, Westoby M, Falster DS, Fitzjohn RG, O'Meara BC, Pennell MW, McGlinn DJ, Eastman JM, Moles AT, Reich PB, Tank DC, Wright IJ, Aarssen L, Beaulieu JM, Kooyman RM, et al. Functional distinctiveness of major plant lineages Journal of Ecology. 102: 345-356. DOI: 10.1111/1365-2745.12208  0.78
2014 Zanne AE, Tank DC, Cornwell WK, Eastman JM, Smith SA, FitzJohn RG, McGlinn DJ, O’Meara BC, Moles AT, Reich PB, Royer DL, Soltis DE, Stevens PF, Westoby M, Wright IJ, ... ... Beaulieu JM, et al. Erratum: Corrigendum: Three keys to the radiation of angiosperms into freezing environments Nature. 514: 394-394. DOI: 10.1038/Nature13842  0.626
2013 Beaulieu JM, Donoghue MJ. Fruit evolution and diversification in campanulid angiosperms. Evolution; International Journal of Organic Evolution. 67: 3132-44. PMID 24151998 DOI: 10.1111/evo.12180  0.576
2013 Leslie AB, Beaulieu JM, Crane PR, Donoghue MJ. Explaining the distribution of breeding and dispersal syndromes in conifers. Proceedings. Biological Sciences / the Royal Society. 280: 20131812. PMID 24026822 DOI: 10.1098/Rspb.2013.1812  0.585
2013 Beaulieu JM, O'Meara BC, Donoghue MJ. Identifying hidden rate changes in the evolution of a binary morphological character: the evolution of plant habit in campanulid angiosperms. Systematic Biology. 62: 725-37. PMID 23676760 DOI: 10.1093/Sysbio/Syt034  0.76
2013 Beaulieu JM, Tank DC, Donoghue MJ. A Southern Hemisphere origin for campanulid angiosperms, with traces of the break-up of Gondwana. Bmc Evolutionary Biology. 13: 80. PMID 23565668 DOI: 10.1186/1471-2148-13-80  0.726
2012 Leslie AB, Beaulieu JM, Rai HS, Crane PR, Donoghue MJ, Mathews S. Hemisphere-scale differences in conifer evolutionary dynamics. Proceedings of the National Academy of Sciences of the United States of America. 109: 16217-21. PMID 22988083 DOI: 10.1073/Pnas.1213621109  0.561
2012 Beaulieu JM, Jhwueng DC, Boettiger C, O'Meara BC. Modeling stabilizing selection: expanding the Ornstein-Uhlenbeck model of adaptive evolution. Evolution; International Journal of Organic Evolution. 66: 2369-83. PMID 22834738 DOI: 10.1111/J.1558-5646.2012.01619.X  0.687
2012 Schmerler SB, Clement WL, Beaulieu JM, Chatelet DS, Sack L, Donoghue MJ, Edwards EJ. Evolution of leaf form correlates with tropical-temperate transitions in Viburnum (Adoxaceae). Proceedings. Biological Sciences / the Royal Society. 279: 3905-13. PMID 22810426 DOI: 10.1098/Rspb.2012.1110  0.698
2012 Beaulieu JM, Ree RH, Cavender-Bares J, Weiblen GD, Donoghue MJ. Synthesizing phylogenetic knowledge for ecological research Ecology. 93: S4-S13. DOI: 10.1890/11-0638.1  0.708
2011 Smith SA, Beaulieu JM, Stamatakis A, Donoghue MJ. Understanding angiosperm diversification using small and large phylogenetic trees. American Journal of Botany. 98: 404-14. PMID 21613134 DOI: 10.3732/Ajb.1000481  0.652
2010 Smith SA, Beaulieu JM, Donoghue MJ. An uncorrelated relaxed-clock analysis suggests an earlier origin for flowering plants. Proceedings of the National Academy of Sciences of the United States of America. 107: 5897-902. PMID 20304790 DOI: 10.1073/Pnas.1001225107  0.634
2010 Beaulieu JM, Smith SA, Leitch IJ. On the Tempo of Genome Size Evolution in Angiosperms Journal of Botany. 2010: 1-8. DOI: 10.1155/2010/989152  0.445
2009 Smith SA, Beaulieu JM. Life history influences rates of climatic niche evolution in flowering plants. Proceedings. Biological Sciences / the Royal Society. 276: 4345-52. PMID 19776076 DOI: 10.1098/Rspb.2009.1176  0.541
2009 Smith SA, Beaulieu JM, Donoghue MJ. Mega-phylogeny approach for comparative biology: an alternative to supertree and supermatrix approaches. Bmc Evolutionary Biology. 9: 37. PMID 19210768 DOI: 10.1186/1471-2148-9-37  0.635
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