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Ji Yi, Ph.D. - Publications

Affiliations: 
2012 Biomedical Engineering Northwestern University, Evanston, IL 
Area:
Biomedical Engineering, Biochemistry
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60 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Wang J, Baker A, Subramanian ML, Siegel NH, Chen X, Ness S, Yi J. Simultaneous visible light optical coherence tomography and near infrared OCT angiography in retinal pathologies: A case study. Experimental Biology and Medicine (Maywood, N.J.). 15353702211063839. PMID 34904454 DOI: 10.1177/15353702211063839  0.317
2020 Song W, Shao W, Yi W, Liu R, Desai M, Ness S, Yi J. Visible light optical coherence tomography angiography (vis-OCTA) facilitates local microvascular oximetry in the human retina. Biomedical Optics Express. 11: 4037-4051. PMID 33014584 DOI: 10.1364/BOE.395843  0.306
2019 Spicer GLC, Eid A, Wangpraseurt D, Swain TD, Winkelmann JA, Yi J, Kühl M, Marcelino LA, Backman V. Author Correction: Measuring light scattering and absorption in corals with Inverse Spectroscopic Optical Coherence Tomography (ISOCT): a new tool for non-invasive monitoring. Scientific Reports. 9: 18056. PMID 31772266 DOI: 10.1038/S41598-019-54379-5  0.573
2019 Liu R, Cheng S, Tian L, Yi J. Deep spectral learning for label-free optical imaging oximetry with uncertainty quantification. Light, Science & Applications. 8: 102. PMID 31754429 DOI: 10.1038/s41377-019-0216-0  0.312
2019 Spicer GLC, Eid A, Wangpraseurt D, Swain TD, Winkelmann JA, Yi J, Kühl M, Marcelino LA, Backman V. Measuring light scattering and absorption in corals with Inverse Spectroscopic Optical Coherence Tomography (ISOCT): a new tool for non-invasive monitoring. Scientific Reports. 9: 14148. PMID 31578438 DOI: 10.1038/S41598-019-50658-3  0.626
2019 Song W, Fu S, Song S, Zhang S, Zhang L, Ness S, Desai M, Yi J. Longitudinal detection of retinal alterations by visible and near-infrared optical coherence tomography in a dexamethasone-induced ocular hypertension mouse model. Neurophotonics. 6: 041103. PMID 31312670 DOI: 10.1117/1.NPh.6.4.041103  0.306
2019 Liu R, Song W, Backman V, Yi J. Quantitative quality-control metrics for oximetry in small vessels by visible light optical coherence tomography angiography. Biomedical Optics Express. 10: 465-486. PMID 30800493 DOI: 10.1364/Boe.10.000465  0.575
2018 Liu R, Winkelmann JA, Spicer G, Zhu Y, Eid A, Ameer GA, Backman V, Yi J. Single capillary oximetry and tissue ultrastructural sensing by dual-band dual-scan inverse spectroscopic optical coherence tomography. Light, Science & Applications. 7: 57. PMID 30839641 DOI: 10.1038/S41377-018-0057-2  0.598
2018 Winkelmann JA, Eid A, Nguyen TQ, Bui T, Yi J, Backman V. In vivo broadband visible light optical coherence tomography probe enables inverse spectroscopic analysis. Optics Letters. 43: 619-622. PMID 29400855 DOI: 10.1364/Ol.43.000619  0.621
2017 Song W, Zhang L, Ness S, Yi J. Wavelength-dependent optical properties of melanosomes in retinal pigmented epithelium and their changes with melanin bleaching: a numerical study. Biomedical Optics Express. 8: 3966-3980. PMID 29026682 DOI: 10.1364/BOE.8.003966  0.365
2017 Liu R, Spicer G, Chen S, Zhang HF, Yi J, Backman V. Theoretical model for optical oximetry at the capillary level: exploring hemoglobin oxygen saturation through backscattering of single red blood cells. Journal of Biomedical Optics. 22: 25002. PMID 28157244 DOI: 10.1117/1.Jbo.22.2.025002  0.593
2017 Eid A, Zhang D, Yi J, Backman V. FDTD based model of ISOCT imaging for validation of nanoscale sensitivity (Conference Presentation) Proceedings of Spie. 10075. DOI: 10.1117/12.2253058  0.628
2017 Yi J, Zhang L. Wavelength-dependent optical properties of melanosomes in retinal pigmented epithelium (Conference Presentation) Proceedings of Spie. 10075. DOI: 10.1117/12.2252693  0.465
2017 Liu R, Spicer G, Chen S, Zhang HF, Yi J, Backman V. A theoretical model for optical oximetry at the capillary-level by optical coherence tomography (Conference Presentation) Proceedings of Spie. 10053: 1005316. DOI: 10.1117/12.2250625  0.619
2016 Wu W, Radosevich AJ, Eshein A, Nguyen TQ, Yi J, Cherkezyan L, Roy HK, Szleifer I, Backman V. Using electron microscopy to calculate optical properties of biological samples. Biomedical Optics Express. 7: 4749-4762. PMID 27896013 DOI: 10.1364/Boe.7.004749  0.739
2016 Yi J, Puyang Z, Feng L, Duan L, Liang P, Backman V, Liu X, Zhang HF. Optical Detection of Early Damage in Retinal Ganglion Cells in a Mouse Model of Partial Optic Nerve Crush Injury. Investigative Ophthalmology & Visual Science. 57: 5665-5671. PMID 27784071 DOI: 10.1167/Iovs.16-19955  0.558
2016 Dong B, Chen S, Zhou F, Chan CH, Yi J, Zhang HF, Sun C. Real-time Functional Analysis of Inertial Microfluidic Devices via Spectral Domain Optical Coherence Tomography. Scientific Reports. 6: 33250. PMID 27619202 DOI: 10.1038/Srep33250  0.352
2016 Spicer GL, Azarin SM, Yi J, Young ST, Ellis R, Bauer GM, Shea LD, Backman V. Detection of extracellular matrix modification in cancer models with inverse spectroscopic optical coherence tomography. Physics in Medicine and Biology. 61: 6892-6904. PMID 27618507 DOI: 10.1088/0031-9155/61/19/6892  0.588
2016 Shah RS, Soetikno BT, Yi J, Liu W, Skondra D, Zhang HF, Fawzi AA. Visible-Light Optical Coherence Tomography Angiography for Monitoring Laser-Induced Choroidal Neovascularization in Mice. Investigative Ophthalmology & Visual Science. 57: OCT86-OCT95. PMID 27409510 DOI: 10.1167/Iovs.15-18891  0.385
2016 Chen S, Shu X, Yi J, Fawzi A, Zhang HF. Dual-band optical coherence tomography using a single supercontinuum laser source. Journal of Biomedical Optics. 21: 66013. PMID 27304421 DOI: 10.1117/1.Jbo.21.6.066013  0.385
2016 Winkelmann JA, Spicer G, Eid A, Yi J, Backman V. Visible Inverse Spectroscopic Optical Coherence Tomography Probe for Spatially Resolved Nanoscale Characterization Cancer. DOI: 10.1364/Cancer.2016.Jm3A.25  0.607
2016 Zhang HF, Yi J, Chen S, Liu W, Soetikno BT. Visible-light OCT to quantify retinal oxygen metabolism(Conference Presentation) Proceedings of Spie. 9697: 969721. DOI: 10.1117/12.2214830  0.354
2016 Yi J, Liu W, Chen S, Backman V, Sheibani N, Sorenson CM, Fawzi AA, Linsenmeier RA, Zhang HF. Visible light optical coherence tomography measure retinal oxygen metabolic response to systemic oxygenation(Conference Presentation) Proceedings of Spie. 9697. DOI: 10.1117/12.2214803  0.551
2016 Chen S, Yi J, Zhang HF. Visible light optical coherence tomography for microvascular oximetry in ocular circulation(Conference Presentation) Proceedings of Spie. 9697. DOI: 10.1117/12.2214755  0.388
2016 Liu R, Yi J, Chen S, Zhang HF, Backman V. A model for oxygen-dependent backscattering spectroscopic contrast from single red blood cells(Conference Presentation) Proceedings of Spie. 9719. DOI: 10.1117/12.2212998  0.534
2016 Spicer G, Young ST, Yi J, Shea LD, Backman V. ISOCT study of collagen crosslinking of collagen in cancer models(Conference Presentation) Proceedings of Spie. 9719. DOI: 10.1117/12.2212035  0.591
2015 Yi J, Liu W, Chen S, Backman V, Sheibani N, Sorenson CM, Fawzi AA, Linsenmeier RA, Zhang HF. Visible light optical coherence tomography measures retinal oxygen metabolic response to systemic oxygenation. Light, Science & Applications. 4. PMID 26658555 DOI: 10.1038/Lsa.2015.107  0.516
2015 Yi J, Stypula-Cyrus Y, Blaha CS, Roy HK, Backman V. Fractal Characterization of Chromatin Decompaction in Live Cells. Biophysical Journal. 109: 2218-26. PMID 26636933 DOI: 10.1016/J.Bpj.2015.10.014  0.776
2015 Soetikno BT, Yi J, Shah R, Liu W, Purta P, Zhang HF, Fawzi AA. Inner retinal oxygen metabolism in the 50/10 oxygen-induced retinopathy model. Scientific Reports. 5: 16752. PMID 26576731 DOI: 10.1038/Srep16752  0.327
2015 Yi J, Chen S, Shu X, Fawzi AA, Zhang HF. Human retinal imaging using visible-light optical coherence tomography guided by scanning laser ophthalmoscopy. Biomedical Optics Express. 6: 3701-13. PMID 26504622 DOI: 10.1364/Boe.6.003701  0.424
2015 Azarin SM, Yi J, Gower RM, Aguado BA, Sullivan ME, Goodman AG, Jiang EJ, Rao SS, Ren Y, Tucker SL, Backman V, Jeruss JS, Shea LD. In vivo capture and label-free detection of early metastatic cells. Nature Communications. 6: 8094. PMID 26348915 DOI: 10.1038/Ncomms9094  0.502
2015 Liu W, Yi J, Chen S, Jiao S, Zhang HF. Measuring retinal blood flow in rats using Doppler optical coherence tomography without knowing eyeball axial length. Medical Physics. 42: 5356. PMID 26328984 DOI: 10.1118/1.4928597  0.361
2015 Chen S, Yi J, Zhang HF. Measuring oxygen saturation in retinal and choroidal circulations in rats using visible light optical coherence tomography angiography. Biomedical Optics Express. 6: 2840-53. PMID 26309748 DOI: 10.1364/Boe.6.002840  0.405
2015 Urban BE, Yi J, Chen S, Dong B, Zhu Y, DeVries SH, Backman V, Zhang HF. Super-resolution two-photon microscopy via scanning patterned illumination. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 91: 042703. PMID 25974523 DOI: 10.1103/Physreve.91.042703  0.527
2015 Chen S, Yi J, Liu W, Backman V, Zhang HF. Monte Carlo Investigation of Optical Coherence Tomography Retinal Oximetry. Ieee Transactions On Bio-Medical Engineering. 62: 2308-15. PMID 25955984 DOI: 10.1109/Tbme.2015.2424689  0.564
2015 Chen S, Yi J, Liu W, Backman V, Zhang HF. Monte Carlo Investigation of Optical Coherence Tomography Retinal Oximetry Ieee Transactions On Biomedical Engineering. 62: 2308-2315. DOI: 10.1109/TBME.2015.2424689  0.52
2015 Urban BE, Yi J, Chen S, Dong B, Zhu Y, Devries SH, Backman V, Zhang HF. Super-resolution two-photon microscopy via scanning patterned illumination Physical Review E - Statistical, Nonlinear, and Soft Matter Physics. 91. DOI: 10.1103/PhysRevE.91.042703  0.415
2014 Yi J, Chen S, Backman V, Zhang HF. In vivo functional microangiography by visible-light optical coherence tomography. Biomedical Optics Express. 5: 3603-12. PMID 25360376 DOI: 10.1364/Boe.5.003603  0.63
2014 Song W, Wei Q, Liu W, Liu T, Yi J, Sheibani N, Fawzi AA, Linsenmeier RA, Jiao S, Zhang HF. A combined method to quantify the retinal metabolic rate of oxygen using photoacoustic ophthalmoscopy and optical coherence tomography. Scientific Reports. 4: 6525. PMID 25283870 DOI: 10.1038/Srep06525  0.383
2014 Urban BE, Yi J, Yakovlev V, Zhang HF. Investigating femtosecond-laser-induced two-photon photoacoustic generation. Journal of Biomedical Optics. 19: 085001. PMID 25084119 DOI: 10.1117/1.Jbo.19.8.085001  0.411
2014 Yi J, Radosevich AJ, Stypula-Cyrus Y, Mutyal NN, Azarin SM, Horcher E, Goldberg MJ, Bianchi LK, Bajaj S, Roy HK, Backman V. Spatially resolved optical and ultrastructural properties of colorectal and pancreatic field carcinogenesis observed by inverse spectroscopic optical coherence tomography. Journal of Biomedical Optics. 19: 36013. PMID 24643530 DOI: 10.1117/1.Jbo.19.3.036013  0.782
2014 Urban BE, Yi J, Yakovlev V, Zhang HF. Two-Photon Photoacoustic Generation Induced by NIR Femtosecond Pulses Ieee Transactions On Biomedical Engineering. DOI: 10.1364/Biomed.2014.Bs3A.72  0.335
2014 Yi J, Radosevich AJ, Stypula-Cyrus Y, Mutyal NN, Azarin SM, Roy HK, Backman V. Ultra-structural mutations in epithelium and stroma in colorectal cancer field carcinogenesis and their potential biological mechanisms Ieee Transactions On Biomedical Engineering. DOI: 10.1364/Biomed.2014.Bm4A.1  0.755
2014 Radosevich AJ, Mutyal NN, Yi J, Roy HK, Backman V. Targeting the ultrastructural origins of field carcinogenesis using low coherence enhanced backscattering Ieee Transactions On Biomedical Engineering. DOI: 10.1364/Biomed.2014.Bm2B.6  0.708
2013 Rogers JD, Radosevich AJ, Yi J, Backman V. Modeling Light Scattering in Tissue as Continuous Random Media Using a Versatile Refractive Index Correlation Function. Ieee Journal of Selected Topics in Quantum Electronics : a Publication of the Ieee Lasers and Electro-Optics Society. 20: 7000514. PMID 25587211 DOI: 10.1109/Jstqe.2013.2280999  0.732
2013 Radosevich AJ, Mutyal NN, Yi J, Stypula-Cyrus Y, Rogers JD, Goldberg MJ, Bianchi LK, Bajaj S, Roy HK, Backman V. Ultrastructural alterations in field carcinogenesis measured by enhanced backscattering spectroscopy. Journal of Biomedical Optics. 18: 097002. PMID 24008865 DOI: 10.1117/1.Jbo.18.9.097002  0.777
2013 Yi J, Wei Q, Liu W, Backman V, Zhang HF. Visible-light optical coherence tomography for retinal oximetry. Optics Letters. 38: 1796-8. PMID 23722747 DOI: 10.1364/Biomed.2014.Bw4A.5  0.592
2013 Yi J, Radosevich AJ, Rogers JD, Norris SC, Çapoğlu İR, Taflove A, Backman V. Can OCT be sensitive to nanoscale structural alterations in biological tissue? Optics Express. 21: 9043-59. PMID 23571994 DOI: 10.1364/Oe.21.009043  0.753
2013 Liu W, Liu T, Song W, Yi J, Zhang HF. Automatic retinal vessel segmentation based on active contours method in Doppler spectral-domain optical coherence tomography. Journal of Biomedical Optics. 18: 16002. PMID 23292611 DOI: 10.1117/1.Jbo.18.1.016002  0.346
2013 Stypula YE, Yi J, Blaha C, DeLaCruz M, Kunte D, Roy HK, Backman V. 472 Histone Deacetylase (HDAC) Expression As a Biomarker for Colorectal Cancer (CRC) Field Carcinogenesis: Role in High Order Chromatin Modulation Gastroenterology. 144: S-85. DOI: 10.1016/S0016-5085(13)60316-9  0.48
2012 Radosevich AJ, Rogers JD, Turzhitsky V, Mutyal NN, Yi J, Roy HK, Backman V. Polarized Enhanced Backscattering Spectroscopy for Characterization of Biological Tissues at Subdiffusion Length-scales. Ieee Journal of Selected Topics in Quantum Electronics : a Publication of the Ieee Lasers and Electro-Optics Society. 18: 1313-1325. PMID 24163574 DOI: 10.1109/Jstqe.2011.2173659  0.791
2012 Radosevich AJ, Yi J, Rogers JD, Backman V. Structural length-scale sensitivities of reflectance measurements in continuous random media under the Born approximation. Optics Letters. 37: 5220-2. PMID 23258058 DOI: 10.1364/Ol.37.005220  0.709
2012 Yi J, Backman V. Imaging a full set of optical scattering properties of biological tissue by inverse spectroscopic optical coherence tomography. Optics Letters. 37: 4443-5. PMID 23114323 DOI: 10.1364/Ol.37.004443  0.625
2012 Yi J, Wei Q, Zhang HF, Backman V. Structured interference optical coherence tomography. Optics Letters. 37: 3048-50. PMID 22859081 DOI: 10.1364/Ol.37.003048  0.597
2012 Yi J, Radosevich A, Rogers JD, Backman V. Inverse spectroscopic optical coherence tomography (ISOCT): Non-invasively quantifying the complete optical scattering properties from week scattering tissue Biomedical Optics, Biomed 2012. DOI: 10.1364/Biomed.2012.Btu3A.88  0.749
2012 Bajaj S, Yi J, Radosevich A, Goldberg MJ, Rogers JD, Bianchi LK, Yen EF, Upadhye S, Tsang T, Parker B, Roy HK, Backman V. 915 Development of Novel Optical Technologies for Early Colon Carcinogenesis Detection via Nanoscale Mass Density Fluctuations: Potential Implications for Endoscopic Diagnostics Gastrointestinal Endoscopy. 75: AB172. DOI: 10.1016/J.Gie.2012.04.146  0.704
2011 Radosevich AJ, Mutyal NN, Turzhitsky V, Rogers JD, Yi J, Taflove A, Backman V. Measurement of the spatial backscattering impulse-response at short length scales with polarized enhanced backscattering. Optics Letters. 36: 4737-9. PMID 22179867 DOI: 10.1364/Ol.36.004737  0.762
2010 Yi J, Li X. Estimation of oxygen saturation from erythrocytes by high-resolution spectroscopic optical coherence tomography. Optics Letters. 35: 2094-6. PMID 20548397 DOI: 10.1364/Ol.35.002094  0.402
2009 Yi J, Gong J, Li X. Analyzing absorption and scattering spectra of micro-scale structures with spectroscopic optical coherence tomography. Optics Express. 17: 13157-67. PMID 19654721 DOI: 10.1364/Oe.17.013157  0.452
2008 Gong J, Yi J, Turzhitsky VM, Muro K, Li X. Characterization of malignant brain tumor using elastic light scattering spectroscopy. Disease Markers. 25: 303-12. PMID 19208948 DOI: 10.1155/2008/208120  0.625
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