Mahdi Belcaid, Ph.D. - Publications

Affiliations: 
2012 University of Hawai'i at Manoa, Honolulu, HI 
Area:
Computer Science, Bioinformatics Biology, Genetics

11 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Harrigan WL, Ferrell BD, Wommack KE, Polson SW, Schreiber ZD, Belcaid M. Improvements in viral gene annotation using large language models and soft alignments. Bmc Bioinformatics. 25: 165. PMID 38664627 DOI: 10.1186/s12859-024-05779-6  0.307
2021 Arisdakessian CG, Nigro O, Steward G, Poisson G, Belcaid M. CoCoNet: An Efficient Deep Learning Tool for Viral Metagenome Binning. Bioinformatics (Oxford, England). PMID 33822891 DOI: 10.1093/bioinformatics/btab213  0.708
2019 Belcaid M, Casaburi G, McAnulty SJ, Schmidbaur H, Suria AM, Moriano-Gutierrez S, Pankey MS, Oakley TH, Kremer N, Koch EJ, Collins AJ, Nguyen H, Lek S, Goncharenko-Foster I, Minx P, et al. Symbiotic organs shaped by distinct modes of genome evolution in cephalopods. Proceedings of the National Academy of Sciences of the United States of America. PMID 30635418 DOI: 10.1073/Pnas.1817322116  0.363
2016 Elfekih S, Chen CY, Hsu JC, Belcaid M, Haymer D. Identification and preliminary characterization of chemosensory perception-associated proteins in the melon fly Bactrocera cucurbitae using RNA-seq. Scientific Reports. 6: 19112. PMID 26752702 DOI: 10.1038/srep19112  0.353
2015 Belcaid M, Kang Y, Tuanyok A, Hoang TT. Complete Genome Sequence of Burkholderia cepacia Strain LO6. Genome Announcements. 3. PMID 26067955 DOI: 10.1128/genomeA.00587-15  0.44
2014 Culley AI, Mueller JA, Belcaid M, Wood-Charlson EM, Poisson G, Steward GF. The characterization of RNA viruses in tropical seawater using targeted PCR and metagenomics. Mbio. 5: e01210-14. PMID 24939887 DOI: 10.1128/Mbio.01210-14  0.697
2013 Steward GF, Culley AI, Mueller JA, Wood-Charlson EM, Belcaid M, Poisson G. Are we missing half of the viruses in the ocean? The Isme Journal. 7: 672-9. PMID 23151645 DOI: 10.1038/Ismej.2012.121  0.672
2011 Belcaid M, Bergeron A, Poisson G. The evolution of the tape measure protein: units, duplications and losses. Bmc Bioinformatics. 12: S10. PMID 22151602 DOI: 10.1186/1471-2105-12-S9-S10  0.679
2010 Belcaid M, Bergeron A, Poisson G. Mosaic graphs and comparative genomics in phage communities. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 17: 1315-26. PMID 20874413 DOI: 10.1089/Cmb.2010.0108  0.71
2007 Bergeron A, Belcaid M, Steward GF, Poisson G. Divide and conquer: enriching environmental sequencing data. Plos One. 2: e830. PMID 17786202 DOI: 10.1371/Journal.Pone.0000830  0.693
2006 Houde M, Belcaid M, Ouellet F, Danyluk J, Monroy AF, Dryanova A, Gulick P, Bergeron A, Laroche A, Links MG, MacCarthy L, Crosby WL, Sarhan F. Wheat EST resources for functional genomics of abiotic stress. Bmc Genomics. 7: 149. PMID 16772040 DOI: 10.1186/1471-2164-7-149  0.351
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