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Gregory R Smith - Publications

Affiliations: 
Icahn School of Medicine at Mount Sinai, New York, NY, United States 
Area:
Computational Biology, Innate Immunity, Influenza Infection
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11 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Ramos I, Smith G, Ruf-Zamojski F, Martinez-Romero C, Fribourg M, Carbajal EA, Hartmann BM, Nair VD, Marjanovic N, Monteagudo PL, DeJesus VA, Mutetwa T, Zamojski M, Tan GS, Jayaprakash C, et al. Innate immune response to influenza virus at single-cell resolution in human epithelial cells revealed paracrine induction of interferon lambda 1. Journal of Virology. PMID 31375585 DOI: 10.1128/Jvi.00559-19  0.327
2016 Smith GR, Birtwistle MR. A Mechanistic Beta-Binomial Probability Model for mRNA Sequencing Data. Plos One. 11: e0157828. PMID 27326762 DOI: 10.1371/Journal.Pone.0157828  0.376
2016 Smith GR, Xie L, Schwartz R. Modeling Effects of RNA on Capsid Assembly Pathways via Coarse-Grained Stochastic Simulation. Plos One. 11: e0156547. PMID 27244559 DOI: 10.1371/Journal.Pone.0156547  0.663
2016 Xie L, Smith G, Schwartz R. Derivative-free optimization of rate parameters of capsid assembly models from bulk in vitro data. Ieee/Acm Transactions On Computational Biology and Bioinformatics / Ieee, Acm. PMID 27168601 DOI: 10.1109/Tcbb.2016.2563421  0.632
2015 Xie L, Smith G, Schwartz R. Applying Derivative-Free Optimization to Fit Kinetic Parameters of Viral Capsid Self-Assembly Models from Multi-Source Bulk in vitro Data Biophysical Journal. 108. DOI: 10.1016/J.Bpj.2014.11.2572  0.681
2015 Smith GR, Xie L, Schwartz R. Computationally Projecting the Influence of Nucleic Acid on Pathways of Nucleation-Limited Virus Capsid Assembly Biophysical Journal. 108. DOI: 10.1016/J.Bpj.2014.11.1734  0.684
2014 Smith GR, Xie L, Lee B, Schwartz R. Applying molecular crowding models to simulations of virus capsid assembly in vitro. Biophysical Journal. 106: 310-20. PMID 24411263 DOI: 10.1016/J.Bpj.2013.11.022  0.662
2014 Smith GR, Xie L, Lee B, Schwartz R. Evaluating the Influence of Environment on Virus Capsid Assembly Pathways through Stochastic Simulation Biophysical Journal. 106: 61a. DOI: 10.1016/J.Bpj.2013.11.417  0.681
2013 Xie L, Smith GR, Schwartz R. Improving Inference of Rate Parameters for Viral Capsid Assembly Systems Biophysical Journal. 104. DOI: 10.1016/J.Bpj.2012.11.2302  0.664
2012 Xie L, Smith GR, Feng X, Schwartz R. Surveying capsid assembly pathways through simulation-based data fitting. Biophysical Journal. 103: 1545-54. PMID 23062347 DOI: 10.1016/J.Bpj.2012.08.057  0.681
2012 Smith GR, Xie L, Feng X, Lee B, Schwartz R. Translating Bulk Measures of Capsid Assembly Progress into Insights on Fine-Scale Kinetics and Pathways Biophysical Journal. 102: 640a. DOI: 10.1016/J.Bpj.2011.11.3485  0.685
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