Andy Ogram - Publications

Affiliations: 
Soil and Water Sciences University of Florida, Gainesville, Gainesville, FL, United States 

46/82 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Nepal J, Xin X, Maltais-Landry G, Ahmad W, Pereira J, Santra S, Wright AL, Ogram A, Stofella PJ, He Z. Carbon nanomaterials are a superior soil amendment for sandy soils than biochar based on impacts on lettuce growth, physiology and soil biochemical quality. Nanoimpact. 31: 100480. PMID 37625671 DOI: 10.1016/j.impact.2023.100480  0.377
2021 Huang L, Bae HS, Young C, Pain AJ, Martin JB, Ogram A. Campylobacterota dominate the microbial communities in a tropical karst subterranean estuary, with implications for cycling and export of nitrogen to coastal waters. Environmental Microbiology. PMID 34472187 DOI: 10.1111/1462-2920.15746  0.361
2021 Sidhu H, Bae HS, Ogram A, O'Connor G, Yu F. Azithromycin and Ciprofloxacin can Promote Antibiotic Resistance in Biosolids and Biosolids-amended Soils. Applied and Environmental Microbiology. AEM0037321. PMID 34085858 DOI: 10.1128/AEM.00373-21  0.323
2021 Campos M, Rilling JI, Acuña JJ, Valenzuela T, Larama G, Peña-Cortés F, Ogram A, Jaisi DP, Jorquera MA. Spatiotemporal variations and relationships of phosphorus, phosphomonoesterases, and bacterial communities in sediments from two Chilean rivers Science of the Total Environment. 776: 145782. DOI: 10.1016/J.SCITOTENV.2021.145782  0.308
2020 Morrison ES, Thomas P, Ogram A, Kahveci T, Turner BL, Chanton JP. Characterization of Bacterial and Fungal Communities Reveals Novel Consortia in Tropical Oligotrophic Peatlands. Microbial Ecology. PMID 31942666 DOI: 10.1007/S00248-020-01483-Z  0.697
2019 Bae HS, Dierberg FE, Ogram A. Periphyton and flocculent materials are important ecological compartments supporting abundant and diverse mercury methylator assemblages in the Florida Everglades. Applied and Environmental Microbiology. PMID 31028023 DOI: 10.1128/Aem.00156-19  0.328
2019 McCaskill GL, Jose S, Ogram AV. Low‐dose Herbicide Effects on Tree Establishment and Soil Nitrogen Biogeochemistry within Pine Savannas Soil Science Society of America Journal. 83. DOI: 10.2136/SSSAJ2018.09.0347  0.322
2019 Vuyyuru M, Sandhu HS, Erickson JE, Ogram AV. Soil chemical and biological fertility, microbial community structure and dynamics in successive and fallow sugarcane planting systems Agroecology and Sustainable Food Systems. 44: 768-794. DOI: 10.1080/21683565.2019.1666075  0.352
2018 Sidhu H, O'Connor G, Ogram A, Kumar K. Bioavailability of biosolids-borne ciprofloxacin and azithromycin to terrestrial organisms: Microbial toxicity and earthworm responses. The Science of the Total Environment. 650: 18-26. PMID 30195128 DOI: 10.1016/J.Scitotenv.2018.09.004  0.321
2018 Bae HS, Morrison E, Chanton JP, Ogram A. Methanogens are major contributors to nitrogen fixation in soils of the Florida Everglades. Applied and Environmental Microbiology. PMID 29374038 DOI: 10.1128/Aem.02222-17  0.692
2018 Ward ND, Morrison ES, Liu Y, Rivas-Ubach A, Osborne TZ, Ogram AV, Bianchi TS. Marine microbial community responses related to wetland carbon mobilization in the coastal zone Limnology and Oceanography Letters. 4: 25-33. DOI: 10.1002/Lol2.10101  0.628
2017 McCaskill GL, Jose S, Chauhan A, Ogram AV. Soil nitrogen dynamics as an indicator for longleaf pine restoration Restoration Ecology. 26: 264-274. DOI: 10.1111/REC.12556  0.313
2017 Morrison E, Lagos L, Al-Agely A, Glaab H, Johnson W, Jorquera MA, Ogram A. Mycorrhizal inoculation increases genes associated with nitrification and improved nutrient retention in soil Biology and Fertility of Soils. 53: 275-279. DOI: 10.1007/S00374-017-1176-2  0.677
2016 Kim H, Bae HS, Reddy KR, Ogram A. Distributions, abundances and activities of microbes associated with the nitrogen cycle in riparian and stream sediments of a river tributary. Water Research. 106: 51-61. PMID 27697684 DOI: 10.1016/J.Watres.2016.09.048  0.368
2016 Kim H, Bae HS, Reddy KR, Ogram A. Distributions, abundances and activities of microbes associated with the nitrogen cycle in riparian and stream sediments of a river tributary Water Research. 106: 51-61. DOI: 10.1016/j.watres.2016.09.048  0.322
2016 Morrison E, Newman S, Bae HS, He Z, Zhou J, Reddy KR, Ogram A. Microbial genetic and enzymatic responses to an anthropogenic phosphorus gradient within a subtropical peatland Geoderma. 268: 119-127. DOI: 10.1016/J.Geoderma.2016.01.008  0.688
2016 Kim H, Ogram A, Bae H. Nitrification, Anammox and Denitrification along a Nutrient Gradient in the Florida Everglades Wetlands. 37: 391-399. DOI: 10.1007/S13157-016-0857-1  0.386
2016 Banik C, Harris WG, Ogram AV, Nair VD. Carbon, iron, and aluminum responses to controlled water table fluctuations in sandy soil material Journal of Soils and Sediments. 16: 2449-2457. DOI: 10.1007/S11368-016-1444-Z  0.325
2016 Lagos LM, Acuña JJ, Maruyama F, Ogram A, de la Luz Mora M, Jorquera MA. Effect of phosphorus addition on total and alkaline phosphomonoesterase-harboring bacterial populations in ryegrass rhizosphere microsites Biology and Fertility of Soils. 1-13. DOI: 10.1007/S00374-016-1137-1  0.424
2016 Acuña JJ, Durán P, Lagos LM, Ogram A, de la Luz Mora M, Jorquera MA. Bacterial alkaline phosphomonoesterase in the rhizospheres of plants grown in Chilean extreme environments Biology and Fertility of Soils. 52: 763-773. DOI: 10.1007/S00374-016-1113-9  0.432
2015 Bae HS, Holmes ME, Chanton JP, Reddy KR, Ogram A. Distribution, Activities, and Interactions of Methanogens and Sulfate Reducing Prokaryotes in the Florida Everglades. Applied and Environmental Microbiology. PMID 26276115 DOI: 10.1128/Aem.01583-15  0.319
2015 Weidow CA, Bae HS, Chauhan A, Ogram A. Diversity and distribution of actinobacterial aromatic ring oxygenase genes across contrasting soil properties. Microbial Ecology. 69: 676-83. PMID 25342536 DOI: 10.1007/S00248-014-0501-7  0.328
2015 Lagos L, Maruyama F, Nannipieri P, Mora ML, Ogram A, Jorquera MA. Current overview on the study of bacteria in the rhizosphere by modern molecular techniques: a mini‒review Journal of Soil Science and Plant Nutrition. 15: 504-523. DOI: 10.4067/S0718-95162015005000042  0.312
2014 Gohil H, Ogram A, Thomas J. Stimulation of anaerobic biodegradation of DDT and its metabolites in a muck soil: laboratory microcosm and mesocosm studies. Biodegradation. 25: 633-42. PMID 24584703 DOI: 10.1007/S10532-014-9687-0  0.303
2012 Chauhan A, Pathak A, Ogram A. Composition of methane-oxidizing bacterial communities as a function of nutrient loading in the Florida everglades. Microbial Ecology. 64: 750-9. PMID 22544346 DOI: 10.1007/S00248-012-0058-2  0.427
2011 Ogram A, Chauhan A, Inglett KS, Jayachandran K, Newman S. Microbial Ecology and Everglades Restoration Critical Reviews in Environmental Science and Technology. 41: 289-308. DOI: 10.1080/10643389.2010.531205  0.425
2009 Ye R, Wright AL, Inglett K, Wang Y, Ogram AV, Reddy KR. Land‐Use Effects on Soil Nutrient Cycling and Microbial Community Dynamics in the Everglades Agricultural Area, Florida Communications in Soil Science and Plant Analysis. 40: 2725-2742. DOI: 10.1080/00103620903173772  0.43
2008 Smith JM, Ogram A. Genetic and functional variation in denitrifier populations along a short-term restoration chronosequence. Applied and Environmental Microbiology. 74: 5615-20. PMID 18641159 DOI: 10.1128/Aem.00349-08  0.43
2007 Uz I, Chauhan A, Ogram AV. Cellulolytic, fermentative, and methanogenic guilds in benthic periphyton mats from the Florida Everglades. Fems Microbiology Ecology. 61: 337-47. PMID 17651137 DOI: 10.1111/J.1574-6941.2007.00341.X  0.374
2007 Smith JM, Castro H, Ogram A. Structure and function of methanogens along a short-term restoration chronosequence in the Florida Everglades Applied and Environmental Microbiology. 73: 4135-4141. PMID 17449688 DOI: 10.1128/Aem.02557-06  0.391
2007 Corstanje R, Reddy K, Prenger J, Newman S, Ogram A. Soil microbial eco-physiological response to nutrient enrichment in a sub-tropical wetland Ecological Indicators. 7: 277-289. DOI: 10.1016/J.Ecolind.2006.02.002  0.505
2006 Chauhan A, Ogram A. Phylogeny of acetate-utilizing microorganisms in soils along a nutrient gradient in the Florida Everglades. Applied and Environmental Microbiology. 72: 6837-40. PMID 17021240 DOI: 10.1128/Aem.01030-06  0.373
2006 Uz I, Ogram AV. Cellulolytic and fermentative guilds in eutrophic soils of the Florida Everglades. Fems Microbiology Ecology. 57: 396-408. PMID 16907754 DOI: 10.1111/J.1574-6941.2006.00120.X  0.314
2006 Chauhan A, Reddy KR, Ogram AV. Syntrophic-archaeal associations in a nutrient-impacted freshwater marsh. Journal of Applied Microbiology. 100: 73-84. PMID 16405687 DOI: 10.1111/J.1365-2672.2005.02751.X  0.345
2005 Castro H, Newman S, Reddy KR, Ogram A. Distribution and stability of sulfate-reducing prokaryotic and hydrogenotrophic methanogenic assemblages in nutrient-impacted regions of the Florida Everglades. Applied and Environmental Microbiology. 71: 2695-704. PMID 15870361 DOI: 10.1128/Aem.71.5.2695-2704.2005  0.363
2005 Ramakrishnan V, Ogram AV, Lindner AS. Impacts of co-solvent flushing on microbial populations capable of degrading trichloroethylene. Environmental Health Perspectives. 113: 55-61. PMID 15626648 DOI: 10.1289/Ehp.6937  0.317
2005 Araujo QR, Comerford NB, Ogram AV, Al-Agely A, Santos Filho LP, Santos JG. Soil carbon and physical property changes in Brazilian Coastal Tableland soils with land use following deforestation Agroforestry Systems. 63: 193-198. DOI: 10.1007/S10457-004-3198-7  0.335
2004 Castro H, Ogram A, Reddy KR. Phylogenetic characterization of methanogenic assemblages in eutrophic and oligotrophic areas of the Florida everglades Applied and Environmental Microbiology. 70: 6559-6568. PMID 15528519 DOI: 10.1128/Aem.70.11.6559-6568.2004  0.314
2004 Chauhan A, Ogram A, Reddy KR. Syntrophic-methanogenic associations along a nutrient gradient in the Florida Everglades. Applied and Environmental Microbiology. 70: 3475-84. PMID 15184146 DOI: 10.1128/Aem.70.6.3475-3484.2004  0.324
2003 Duan YP, Castro HF, Hewlett TE, White JH, Ogram AV. Detection and characterization of Pasteuria 16S rRNA gene sequences from nematodes and soils. International Journal of Systematic and Evolutionary Microbiology. 53: 105-12. PMID 12656160 DOI: 10.1099/Ijs.0.02303-0  0.325
2002 Castro H, Reddy KR, Ogram A. Composition and function of sulfate-reducing prokaryotes in eutrophic and pristine areas of the Florida Everglades Applied and Environmental Microbiology. 68: 6129-6137. PMID 12450837 DOI: 10.1128/Aem.68.12.6129-6137.2002  0.304
2001 Trabue SL, Ogram AV, Ou LT. Dynamics of carbofuran-degrading microbial communities in soil during three successive annual applications of carbofuran Soil Biology and Biochemistry. 33: 75-81. DOI: 10.1016/S0038-0717(00)00116-4  0.404
2000 Ogram A. Soil molecular microbial ecology at age 20: methodological challenges for the future Soil Biology and Biochemistry. 32: 1499-1504. DOI: 10.1016/S0038-0717(00)00088-2  0.338
1997 Trabue SL, Feng X, Ogram AV, Ou LT. Carbofuran degradation in soil profiles. Journal of Environmental Science and Health. Part. B, Pesticides, Food Contaminants, and Agricultural Wastes. 32: 861-78. PMID 9350077 DOI: 10.1080/03601239709373117  0.303
1995 Xia X, Bollinger J, Ogram A. Molecular genetic analysis of the response of three soil microbial communities to the application of 2,4-D. Molecular Ecology. 4: 17-28. PMID 7711953  0.405
1988 Ogram AV, Sayler GS. The use of gene probes in the rapid analysis of natural microbial communities Journal of Industrial Microbiology. 3: 281-292. DOI: 10.1007/Bf01569528  0.307
Low-probability matches (unlikely to be authored by this person)
2006 Chauhan A, Ogram A. Fatty acid-oxidizing consortia along a nutrient gradient in the Florida Everglades. Applied and Environmental Microbiology. 72: 2400-6. PMID 16597937 DOI: 10.1128/Aem.72.4.2400-2406.2006  0.295
2015 Weidow CA, Bae HS, Chauhan A, Ogram A. Diversity and Distribution of Actinobacterial Aromatic Ring Oxygenase Genes Across Contrasting Soil Properties Microbial Ecology. 69: 676-683. DOI: 10.1007/s00248-014-0501-7  0.282
2008 Sharma J, Ogram AV, Al-Agely A. Mycorrhizae: Implications for Environmental Remediation and Resource Conservation Edis. 2008. DOI: 10.32473/edis-ep351-2007  0.28
2017 Henson WR, Huang L, Graham WD, Ogram A. Nitrate reduction mechanisms and rates in an unconfined eogenetic karst aquifer in two sites with different redox potential Journal of Geophysical Research: Biogeosciences. 122: 1062-1077. DOI: 10.1002/2016Jg003463  0.276
2016 Jorquera MA, Maruyama F, Ogram AV, Navarrete OU, Lagos LM, Inostroza NG, Acuña JJ, Rilling JI, de La Luz Mora M. Rhizobacterial Community Structures Associated with Native Plants Grown in Chilean Extreme Environments. Microbial Ecology. PMID 27406732 DOI: 10.1007/s00248-016-0813-x  0.276
1996 Lee SY, Bollinger J, Bezdicek D, Ogram A. Estimation of the abundance of an uncultured soil bacterial strain by a competitive quantitative PCR method. Applied and Environmental Microbiology. 62: 3787-93. PMID 8837435  0.267
2019 Vuyyuru M, Sandhu HS, McCray JM, Raid RN, Erickson JE, Ogram AV. Amending sugarcane monoculture through rotation breaks and fungicides: effects on soil chemical and microbial properties, and sucrose yields Crop and Pasture Science. 70: 990. DOI: 10.1071/CP19264  0.261
2010 Ogram AV, Mathot ML, Harsh JB, Boyle J, Pettigrew CA. Effects of DNA polymer length on its adsorption to soils. Applied and Environmental Microbiology. 60: 393-6. PMID 16349168 DOI: 10.1128/Aem.60.2.393-396.1994  0.258
2013 Zeleke J, Lu SL, Wang JG, Huang JX, Li B, Ogram AV, Quan ZX. Methyl coenzyme M reductase A (mcrA) gene-based investigation of methanogens in the mudflat sediments of Yangtze River estuary, China. Microbial Ecology. 66: 257-67. PMID 23306392 DOI: 10.1007/s00248-012-0155-2  0.253
1997 Feng X, Ou LT, Ogram A. Plasmid-mediated mineralization of carbofuran by Sphingomonas sp. strain CF06. Applied and Environmental Microbiology. 63: 1332-7. PMID 9097429 DOI: 10.1128/aem.63.4.1332-1337.1997  0.25
2014 Holmes ME, Chanton JP, Bae HS, Ogram A. Effect of nutrient enrichment on δ13CH4 and the methane production pathway in the Florida Everglades Journal of Geophysical Research G: Biogeosciences. 119: 1267-1280. DOI: 10.1002/Jgrg.20122  0.246
2018 Bae HS, Huang L, White JR, Wang J, DeLaune RD, Ogram A. Response of microbial populations regulating nutrient biogeochemical cycles to oiling of coastal saltmarshes from the Deepwater Horizon oil spill. Environmental Pollution (Barking, Essex : 1987). 241: 136-147. PMID 29804046 DOI: 10.1016/J.Envpol.2018.05.033  0.24
2014 Bae HS, Dierberg FE, Ogram A. Syntrophs dominate sequences associated with the mercury methylation-related gene hgcA in the water conservation areas of the Florida Everglades. Applied and Environmental Microbiology. 80: 6517-26. PMID 25107983 DOI: 10.1128/Aem.01666-14  0.236
2016 Jorquera MA, Maruyama F, Ogram AV, Navarrete OU, Lagos LM, Inostroza NG, Acuña JJ, Rilling JI, de La Luz Mora M. Erratum to: Rhizobacterial Community Structures Associated with Native Plants Grown in Chilean Extreme Environments. Microbial Ecology. PMID 27538874 DOI: 10.1007/s00248-016-0830-9  0.227
1997 Guo C, Sun W, Harsh JB, Ogram A. Hybridization Analysis of Microbial DNA from Fuel Oil-Contaminated and Noncontaminated Soil Microbial Ecology. 34: 178-87. PMID 9337413 DOI: 10.1007/s002489900047  0.22
2012 Ogram A, Sayler GS, Gustin D, Lewis RJ. DNA adsorption to soils and sediments. Environmental Science & Technology. 22: 982-4. PMID 22195724 DOI: 10.1021/Es00173A020  0.216
2008 Jasrotia P, Ogram A. Diversity of nifH genotypes in floating periphyton mats along a nutrient gradient in the Florida Everglades. Current Microbiology. 56: 563-8. PMID 18324437 DOI: 10.1007/S00284-008-9124-X  0.21
1998 Ogram A. Teaching Soil Bacterial Diversity from a Phylogenetic Perspective: A Term Project Utilizing the Ribosomal Database Project Journal of Natural Resources and Life Sciences Education. 27: 93-96. DOI: 10.2134/jnrlse.1998.0093  0.209
2006 Ogram A, Castro H, Stanley E, Chen W, Prenger J. Distribution of methanotrophs in managed and highly disturbed watersheds Ecological Indicators. 6: 631-643. DOI: 10.1016/J.Ecolind.2005.05.002  0.203
2005 Chauhan A, Ogram A. Evaluation of support matrices for immobilization of anaerobic consortia for efficient carbon cycling in waste regeneration. Biochemical and Biophysical Research Communications. 327: 884-93. PMID 15649428 DOI: 10.1016/J.Bbrc.2004.12.083  0.202
2005 Sharma K, Inglett PW, Reddy KR, Ogram AV. Microscopic examination of photoautotrophic and phosphatase-producing organisms in phosphorus-limited Everglades periphyton mats Limnology and Oceanography. 50: 2057-2062. DOI: 10.4319/lo.2005.50.6.2057  0.189
2013 Pathak A, Green SJ, Ogram A, Chauhan A. Draft Genome Sequence of Rhodococcus opacus Strain M213 Shows a Diverse Catabolic Potential. Genome Announcements. 1. PMID 23409266 DOI: 10.1128/Genomea.00144-12  0.187
2000 Uz I, Duan YP, Ogram A. Characterization of the naphthalene-degrading bacterium, Rhodococcus opacus M213. Fems Microbiology Letters. 185: 231-8. PMID 10754253 DOI: 10.1111/J.1574-6968.2000.Tb09067.X  0.176
1997 Feng X, Ou LT, Ogram A. Cloning and sequence analysis of a novel insertion element from plasmids harbored by the carbofuran-degrading bacterium, Sphingomonas sp. CFO6. Plasmid. 37: 169-79. PMID 9200220 DOI: 10.1006/plas.1997.1289  0.169
2016 Pathak A, Chauhan A, Blom J, Indest KJ, Jung CM, Stothard P, Bera G, Green SJ, Ogram A. Comparative Genomics and Metabolic Analysis Reveals Peculiar Characteristics of Rhodococcus opacus Strain M213 Particularly for Naphthalene Degradation. Plos One. 11: e0161032. PMID 27532207 DOI: 10.1371/Journal.Pone.0161032  0.166
1995 Ogram A, Sun W, Brockman FJ, Fredrickson JK. Isolation and characterization of RNA from low-biomass deep-subsurface sediments. Applied and Environmental Microbiology. 61: 763-8. PMID 7574612 DOI: 10.1128/aem.61.2.763-768.1995  0.156
2015 Holmes ME, Chanton JP, Tfaily MM, Ogram A. CO2 and CH4 isotope compositions and production pathways in a tropical peatland Global Biogeochemical Cycles. DOI: 10.1002/2014Gb004951  0.155
2002 Ou LT, Thomas JE, Chung KY, Ogram AV. Degradation of 1,3-dichloropropene by a soil bacterial consortium and Rhodococcus sp. AS2C isolated from the consortium. Biodegradation. 12: 39-47. PMID 11693294 DOI: 10.1023/A:1011945023787  0.142
2003 Uz I, Rasche ME, Townsend T, Ogram AV, Lindner AS. Characterization of methanogenic and methanotrophic assemblages in landfill samples. Proceedings. Biological Sciences / the Royal Society. 270: S202-5. PMID 14667383 DOI: 10.1098/Rsbl.2003.0061  0.137
1985 Ogram AV, Jessup RE, Ou LT, Rao PS. Effects of sorption on biological degradation rates of (2,4-dichlorophenoxy) acetic acid in soils. Applied and Environmental Microbiology. 49: 582-7. PMID 3994366 DOI: 10.1128/aem.49.3.582-587.1985  0.115
2000 Castro HF, Williams NH, Ogram A. Phylogeny of sulfate-reducing bacteria(1). Fems Microbiology Ecology. 31: 1-9. PMID 10620713 DOI: 10.1111/J.1574-6941.2000.Tb00665.X  0.114
2011 Inglett KS, Bae HS, Aldrich HC, Hatfield K, Ogram AV. Clostridium chromiireducens sp. nov., isolated from Cr(VI)-contaminated soil International Journal of Systematic and Evolutionary Microbiology. 61: 2626-2631. PMID 21148674 DOI: 10.1099/Ijs.0.024554-0  0.094
1987 Ogram A, Sayler GS, Barkay T. The extraction and purification of microbial DNA from sediments Journal of Microbiological Methods. 7: 57-66. DOI: 10.1016/0167-7012(87)90025-X  0.089
1994 Malik M, Kain J, Pettigrew C, Ogram A. Purification and molecular analysis of microbian DNA from compost Journal of Microbiological Methods. 20: 183-196. DOI: 10.1016/0167-7012(94)90003-5  0.027
2011 DeKlotz CM, Ogram AE, Singh S, Dronavalli S, MacGregor JL. Dramatic improvement of facial angiofibromas in tuberous sclerosis with topical rapamycin: optimizing a treatment protocol. Archives of Dermatology. 147: 1116-7. PMID 21931059 DOI: 10.1001/archdermatol.2011.254  0.024
2010 Ogram AE, Sobanko JF, Nigra TP. Metastatic cutaneous Crohn disease of the face: a case report and review of the literature. Cutis. 85: 25-7. PMID 20184208  0.016
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