| Year |
Citation |
Score |
| 2017 |
Skarke C, Lahens NF, Rhoades SD, Campbell A, Bittinger K, Bailey A, Hoffmann C, Olson RS, Chen L, Yang G, Price TS, Moore JH, Bushman FD, Greene CS, Grant GR, et al. A Pilot Characterization of the Human Chronobiome. Scientific Reports. 7: 17141. PMID 29215023 DOI: 10.1038/S41598-017-17362-6 |
0.565 |
|
| 2017 |
Lewis JD, Chen EZ, Baldassano RN, Otley AR, Griffiths AM, Lee D, Bittinger K, Bailey A, Friedman ES, Hoffmann C, Albenberg L, Sinha R, Compher C, Gilroy E, Nessel L, et al. Inflammation, Antibiotics, and Diet as Environmental Stressors of the Gut Microbiome in Pediatric Crohn's Disease. Cell Host & Microbe. 22: 247. PMID 28799909 DOI: 10.1016/j.chom.2017.07.011 |
0.57 |
|
| 2015 |
Lewis JD, Chen EZ, Baldassano RN, Otley AR, Griffiths AM, Lee D, Bittinger K, Bailey A, Friedman ES, Hoffmann C, Albenberg L, Sinha R, Compher C, Gilroy E, Nessel L, et al. Inflammation, Antibiotics, and Diet as Environmental Stressors of the Gut Microbiome in Pediatric Crohn's Disease. Cell Host & Microbe. 18: 489-500. PMID 26468751 DOI: 10.1016/J.Chom.2015.09.008 |
0.606 |
|
| 2015 |
Chehoud C, Albenberg LG, Judge C, Hoffmann C, Grunberg S, Bittinger K, Baldassano RN, Lewis JD, Bushman FD, Wu GD. Fungal Signature in the Gut Microbiota of Pediatric Patients With Inflammatory Bowel Disease. Inflammatory Bowel Diseases. 21: 1948-56. PMID 26083617 DOI: 10.1097/Mib.0000000000000454 |
0.56 |
|
| 2015 |
Benitez AJ, Hoffmann C, Muir AB, Dods KK, Spergel JM, Bushman FD, Wang ML. Inflammation-associated microbiota in pediatric eosinophilic esophagitis. Microbiome. 3: 23. PMID 26034601 DOI: 10.1186/S40168-015-0085-6 |
0.607 |
|
| 2013 |
Dollive S, Chen YY, Grunberg S, Bittinger K, Hoffmann C, Vandivier L, Cuff C, Lewis JD, Wu GD, Bushman FD. Fungi of the murine gut: episodic variation and proliferation during antibiotic treatment. Plos One. 8: e71806. PMID 23977147 DOI: 10.1371/Journal.Pone.0071806 |
0.71 |
|
| 2013 |
Hoffmann C, Dollive S, Grunberg S, Chen J, Li H, Wu GD, Lewis JD, Bushman FD. Archaea and fungi of the human gut microbiome: correlations with diet and bacterial residents. Plos One. 8: e66019. PMID 23799070 DOI: 10.1371/Journal.Pone.0066019 |
0.717 |
|
| 2012 |
Dollive S, Peterfreund GL, Sherrill-Mix S, Bittinger K, Sinha R, Hoffmann C, Nabel CS, Hill DA, Artis D, Bachman MA, Custers-Allen R, Grunberg S, Wu GD, Lewis JD, Bushman FD. A tool kit for quantifying eukaryotic rRNA gene sequences from human microbiome samples. Genome Biology. 13: R60. PMID 22759449 DOI: 10.1186/Gb-2012-13-7-R60 |
0.613 |
|
| 2012 |
Chen J, Bittinger K, Charlson ES, Hoffmann C, Lewis J, Wu GD, Collman RG, Bushman FD, Li H. Associating microbiome composition with environmental covariates using generalized UniFrac distances. Bioinformatics (Oxford, England). 28: 2106-13. PMID 22711789 DOI: 10.1093/Bioinformatics/Bts342 |
0.729 |
|
| 2012 |
Mei J, Liu Y, Dai N, Hoffmann C, Hudock KM, Zhang P, Guttentag SH, Kolls JK, Oliver PM, Bushman FD, Worthen GS. Cxcr2 and Cxcl5 regulate the IL-17/G-CSF axis and neutrophil homeostasis in mice. The Journal of Clinical Investigation. 122: 974-86. PMID 22326959 DOI: 10.1172/Jci60588 |
0.498 |
|
| 2011 |
Wu GD, Chen J, Hoffmann C, Bittinger K, Chen YY, Keilbaugh SA, Bewtra M, Knights D, Walters WA, Knight R, Sinha R, Gilroy E, Gupta K, Baldassano R, Nessel L, et al. Linking long-term dietary patterns with gut microbial enterotypes. Science (New York, N.Y.). 334: 105-8. PMID 21885731 DOI: 10.1126/Science.1208344 |
0.602 |
|
| 2010 |
Wu GD, Lewis JD, Hoffmann C, Chen YY, Knight R, Bittinger K, Hwang J, Chen J, Berkowsky R, Nessel L, Li H, Bushman FD. Sampling and pyrosequencing methods for characterizing bacterial communities in the human gut using 16S sequence tags. Bmc Microbiology. 10: 206. PMID 20673359 DOI: 10.1186/1471-2180-10-206 |
0.618 |
|
| 2009 |
Hildebrandt MA, Hoffmann C, Sherrill-Mix SA, Keilbaugh SA, Hamady M, Chen YY, Knight R, Ahima RS, Bushman F, Wu GD. High-fat diet determines the composition of the murine gut microbiome independently of obesity. Gastroenterology. 137: 1716-24.e1-2. PMID 19706296 DOI: 10.1053/J.Gastro.2009.08.042 |
0.564 |
|
| 2009 |
Hoffmann C, Hill DA, Minkah N, Kirn T, Troy A, Artis D, Bushman F. Community-wide response of the gut microbiota to enteropathogenic Citrobacter rodentium infection revealed by deep sequencing. Infection and Immunity. 77: 4668-78. PMID 19635824 DOI: 10.1128/Iai.00493-09 |
0.623 |
|
| 2008 |
Bushman FD, Hoffmann C, Ronen K, Malani N, Minkah N, Rose HM, Tebas P, Wang GP. Massively parallel pyrosequencing in HIV research. Aids (London, England). 22: 1411-5. PMID 18614863 DOI: 10.1097/Qad.0B013E3282Fc972E |
0.694 |
|
| 2008 |
McKenna P, Hoffmann C, Minkah N, Aye PP, Lackner A, Liu Z, Lozupone CA, Hamady M, Knight R, Bushman FD. The macaque gut microbiome in health, lentiviral infection, and chronic enterocolitis. Plos Pathogens. 4: e20. PMID 18248093 DOI: 10.1371/Journal.Ppat.0040020 |
0.634 |
|
| 2007 |
Hoffmann C, Minkah N, Leipzig J, Wang G, Arens MQ, Tebas P, Bushman FD. DNA bar coding and pyrosequencing to identify rare HIV drug resistance mutations. Nucleic Acids Research. 35: e91. PMID 17576693 DOI: 10.1093/Nar/Gkm435 |
0.531 |
|
| 2006 |
Ciuffi A, Mitchell RS, Hoffmann C, Leipzig J, Shinn P, Ecker JR, Bushman FD. Integration site selection by HIV-based vectors in dividing and growth-arrested IMR-90 lung fibroblasts. Molecular Therapy : the Journal of the American Society of Gene Therapy. 13: 366-73. PMID 16325473 DOI: 10.1016/J.Ymthe.2005.10.009 |
0.541 |
|
| 2005 |
Ciuffi A, Llano M, Poeschla E, Hoffmann C, Leipzig J, Shinn P, Ecker JR, Bushman F. A role for LEDGF/p75 in targeting HIV DNA integration Nature Medicine. 11: 1287-1289. PMID 16311605 DOI: 10.1038/Nm1329 |
0.536 |
|
| 2005 |
Bushman F, Lewinski M, Ciuffi A, Barr S, Leipzig J, Hannenhalli S, Hoffmann C. Genome-wide analysis of retroviral DNA integration. Nature Reviews. Microbiology. 3: 848-58. PMID 16175173 DOI: 10.1038/Nrmicro1263 |
0.548 |
|
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