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Robert F. Shoemaker, Ph.D. - Publications

Affiliations: 
2010 Chemistry University of California, San Diego, La Jolla, CA 
Area:
Inference of gene regulatory networks and determination of protein specificity
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9 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2014 van Steenbergen HW, Luijk R, Shoemaker R, Heijmans BT, Huizinga TW, van der Helm-van Mil AH. Differential methylation within the major histocompatibility complex region in rheumatoid arthritis: a replication study. Rheumatology (Oxford, England). 53: 2317-8. PMID 25273994 DOI: 10.1093/rheumatology/keu380  0.303
2013 Whitaker JW, Shoemaker R, Boyle DL, Hillman J, Anderson D, Wang W, Firestein GS. An imprinted rheumatoid arthritis methylome signature reflects pathogenic phenotype. Genome Medicine. 5: 40. PMID 23631487 DOI: 10.1186/Gm444  0.333
2012 Won KJ, Xu Z, Zhang X, Whitaker JW, Shoemaker R, Ren B, Xu Y, Wang W. Global identification of transcriptional regulators of pluripotency and differentiation in embryonic stem cells Nucleic Acids Research. 40: 8199-8209. PMID 22730289 DOI: 10.1093/Nar/Gks584  0.407
2012 Diep D, Plongthongkum N, Gore A, Fung HL, Shoemaker R, Zhang K. Library-free methylation sequencing with bisulfite padlock probes Nature Methods. 9: 270-272. PMID 22306810 DOI: 10.1038/Nmeth.1871  0.37
2011 Chang R, Shoemaker R, Wang W. Systematic search for recipes to generate induced pluripotent stem cells Plos Computational Biology. 7. PMID 22215993 DOI: 10.1371/Journal.Pcbi.1002300  0.317
2011 Shoemaker R, Wang W, Zhang K. Mediators and dynamics of DNA methylation Wiley Interdisciplinary Reviews: Systems Biology and Medicine. 3: 281-298. PMID 20878927 DOI: 10.1002/Wsbm.124  0.478
2010 Shoemaker R, Deng J, Wang W, Zhang K. Allele-specific methylation is prevalent and is contributed by CpG-SNPs in the human genome. Genome Research. 20: 883-9. PMID 20418490 DOI: 10.1101/Gr.104695.109  0.433
2009 Won KJ, Agarwal S, Shen L, Shoemaker R, Ren B, Wang W. An integrated approach to identifying cis-regulatory modules in the human genome Plos One. 4. PMID 19434238 DOI: 10.1371/Journal.Pone.0005501  0.337
2009 Deng J, Shoemaker R, Xie B, Gore A, LeProust EM, Antosiewicz-Bourget J, Egli D, Maherali N, Park IH, Yu J, Daley GQ, Eggan K, Hochedlinger K, Thomson J, Wang W, et al. Targeted bisulfite sequencing reveals changes in DNA methylation associated with nuclear reprogramming. Nature Biotechnology. 27: 353-60. PMID 19330000 DOI: 10.1038/Nbt.1530  0.486
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