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Ming-Jing Hwang - Publications

Affiliations: 
Academia Sinica, Taipei, Taipei City, Taiwan 
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29 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Sudhakar JN, Lu HH, Chiang HY, Suen CS, Hwang MJ, Wu SY, Shen CN, Chang YM, Li FA, Liu FT, Shui JW. Lumenal Galectin-9-Lamp2 interaction regulates lysosome and autophagy to prevent pathogenesis in the intestine and pancreas. Nature Communications. 11: 4286. PMID 32855403 DOI: 10.1038/S41467-020-18102-7  0.309
2019 Chin DC, Senthil Kumar R, Suen CS, Chien CY, Hwang MJ, Hsu CH, Xuhan X, Lai ZX, Yeh KW. Plant Cytosolic Ascorbate Peroxidase with Dual Catalytic Activity Modulates Abiotic Stress Tolerances. Iscience. 16: 31-49. PMID 31146130 DOI: 10.1016/J.Isci.2019.05.014  0.305
2016 Hsu CH, Chiang AW, Hwang MJ, Liao BY. Proteins with highly evolvable domain architectures are non-essential but highly retained. Molecular Biology and Evolution. PMID 26769031 DOI: 10.1093/Molbev/Msw006  0.339
2015 Shih ES, Hwang MJ. NPPD: A Protein-Protein Docking Scoring Function Based on Dyadic Differences in Networks of Hydrophobic and Hydrophilic Amino Acid Residues. Biology. 4: 282-97. PMID 25811640 DOI: 10.3390/Biology4020282  0.345
2015 Xie ZR, Hwang MJ. Methods for predicting protein-ligand binding sites. Methods in Molecular Biology (Clifton, N.J.). 1215: 383-98. PMID 25330972 DOI: 10.1007/978-1-4939-1465-4_17  0.339
2013 Hsu CH, Chen CK, Hwang MJ. The architectural design of networks of protein domain architectures. Biology Letters. 9: 20130268. PMID 23760167 DOI: 10.1098/Rsbl.2013.0268  0.315
2013 Xie ZR, Liu CK, Hsiao FC, Yao A, Hwang MJ. LISE: a server using ligand-interacting and site-enriched protein triangles for prediction of ligand-binding sites. Nucleic Acids Research. 41: W292-6. PMID 23609546 DOI: 10.1093/Nar/Gkt300  0.366
2013 Shih ES, Hwang MJ. A critical assessment of information-guided protein-protein docking predictions. Molecular & Cellular Proteomics : McP. 12: 679-86. PMID 23242549 DOI: 10.1074/Mcp.M112.020198  0.353
2012 Xie ZR, Hwang MJ. Ligand-binding site prediction using ligand-interacting and binding site-enriched protein triangles. Bioinformatics (Oxford, England). 28: 1579-85. PMID 22495747 DOI: 10.1093/Bioinformatics/Bts182  0.338
2012 Shih ES, Hwang MJ. On the use of distance constraints in protein-protein docking computations. Proteins. 80: 194-205. PMID 22038781 DOI: 10.1002/Prot.23179  0.354
2011 Chung KM, Huang CH, Cheng JH, Tsai CH, Suen CS, Hwang MJ, Chen X. Proline in transmembrane domain of type II protein DPP-IV governs its translocation behavior through endoplasmic reticulum. Biochemistry. 50: 7909-18. PMID 21834515 DOI: 10.1021/Bi200605H  0.32
2011 Huang CH, Suen CS, Lin CT, Chien CH, Lee HY, Chung KM, Tsai TY, Jiaang WT, Hwang MJ, Chen X. Cleavage-site specificity of prolyl endopeptidase FAP investigated with a full-length protein substrate. Journal of Biochemistry. 149: 685-92. PMID 21288888 DOI: 10.1093/Jb/Mvr017  0.328
2010 Chung KM, Cheng JH, Suen CS, Huang CH, Tsai CH, Huang LH, Chen YR, Wang AH, Jiaang WT, Hwang MJ, Chen X. The dimeric transmembrane domain of prolyl dipeptidase DPP-IV contributes to its quaternary structure and enzymatic activities. Protein Science : a Publication of the Protein Society. 19: 1627-38. PMID 20572019 DOI: 10.1002/Pro.443  0.339
2010 Xie ZR, Hwang MJ. An interaction-motif-based scoring function for protein-ligand docking. Bmc Bioinformatics. 11: 298. PMID 20525216 DOI: 10.1186/1471-2105-11-298  0.316
2010 Lin YM, Wu SJ, Chang TW, Wang CF, Suen CS, Hwang MJ, Chang MD, Chen YT, Liao YD. Outer membrane protein I of Pseudomonas aeruginosa is a target of cationic antimicrobial peptide/protein. The Journal of Biological Chemistry. 285: 8985-94. PMID 20100832 DOI: 10.1074/Jbc.M109.078725  0.311
2009 Hwang HW, Lee JR, Chou KY, Suen CS, Hwang MJ, Chen C, Shieh RC, Chau LY. Oligomerization is crucial for the stability and function of heme oxygenase-1 in the endoplasmic reticulum. The Journal of Biological Chemistry. 284: 22672-9. PMID 19556236 DOI: 10.1074/Jbc.M109.028001  0.307
2009 Lin WH, Liu WC, Hwang MJ. Topological and organizational properties of the products of house-keeping and tissue-specific genes in protein-protein interaction networks. Bmc Systems Biology. 3: 32. PMID 19284572 DOI: 10.1186/1752-0509-3-32  0.352
2006 Shih ES, Gan RC, Hwang MJ. OPAAS: a web server for optimal, permuted, and other alternative alignments of protein structures. Nucleic Acids Research. 34: W95-8. PMID 16845117 DOI: 10.1093/Nar/Gkl264  0.356
2004 Shih ES, Hwang MJ. Alternative alignments from comparison of protein structures. Proteins. 56: 519-27. PMID 15229884 DOI: 10.1002/Prot.20124  0.357
2004 Soong T, Hwang M, Chen C. Discovery of Recurrent Structural Motifs for Approximating Three-Dimensional Protein Structures Journal of the Chinese Chemical Society. 51: 1107-1114. DOI: 10.1002/Jccs.200400164  0.334
2003 Yeh CS, Chen FM, Wang JY, Cheng TL, Hwang MJ, Tzou WS. Directional shape complementarity at the protein-DNA interface. Journal of Molecular Recognition : Jmr. 16: 213-22. PMID 12898671 DOI: 10.1002/Jmr.624  0.307
2003 Shih ES, Hwang MJ. Protein structure comparison by probability-based matching of secondary structure elements. Bioinformatics (Oxford, England). 19: 735-41. PMID 12691985 DOI: 10.1093/Bioinformatics/Btg058  0.333
2001 Yao P, Hwang M, Chen Y, Yeh K. Site‐directed mutagenesis evidence for a negatively charged trypsin inhibitory loop in sweet potato sporamin Febs Letters. 496: 134-138. PMID 11356197 DOI: 10.1016/S0014-5793(01)02413-9  0.314
2000 Liu CL, Tsai CC, Lin SC, Wang LI, Hsu CI, Hwang MJ, Lin JY. Primary structure and function analysis of the Abrus precatorius agglutinin A chain by site-directed mutagenesis. Pro(199) Of amphiphilic alpha-helix H impairs protein synthesis inhibitory activity. The Journal of Biological Chemistry. 275: 1897-901. PMID 10636890 DOI: 10.1074/Jbc.275.3.1897  0.351
1999 Yang PK, Tzou WS, Hwang MJ. Restraint-driven formation of alpha-helical coiled coils in molecular dynamics simulations. Biopolymers. 50: 667-77. PMID 10508969 DOI: 10.1002/(Sici)1097-0282(199911)50:6<667::Aid-Bip11>3.0.Co;2-2  0.317
1999 Tzou W, Hwang M. Modeling helix-turn-helix protein-induced DNA bending with knowledge-based distance restraints. Biophysical Journal. 77: 1191-1205. PMID 10465734 DOI: 10.1016/S0006-3495(99)76971-7  0.314
1999 Lai HL, Lin TH, Kao YY, Lin WJ, Hwang MJ, Chern Y. The N terminus domain of type VI adenylyl cyclase mediates its inhibition by protein kinase C Molecular Pharmacology. 56: 644-650. PMID 10462552 DOI: 10.1124/Mol.56.3.644  0.309
1998 Chu P, Hwang M. New Insights For Dinucleotide Backbone Binding In Conserved C5'-H...O Hydrogen Bonds Journal of Molecular Biology. 279: 695-701. PMID 9642053 DOI: 10.1006/Jmbi.1998.1822  0.336
1997 Tzou W, Hwang M. A model for Fis N-terminus and Fis-invertase recognition Febs Letters. 401: 1-5. PMID 9003794 DOI: 10.1016/S0014-5793(96)01348-8  0.345
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