| Year |
Citation |
Score |
| 2023 |
Hsieh YC, Delarue M, Orland H, Koehl P. Analyzing the Geometry and Dynamics of Viral Structures: A Review of Computational Approaches Based on Alpha Shape Theory, Normal Mode Analysis, and Poisson-Boltzmann Theories. Viruses. 15. PMID 37376665 DOI: 10.3390/v15061366 |
0.536 |
|
| 2021 |
Koehl P, Orland H, Delarue M. Parameterizing elastic network models to capture the dynamics of proteins. Journal of Computational Chemistry. PMID 34117647 DOI: 10.1002/jcc.26701 |
0.547 |
|
| 2021 |
Koehl P, Delarue M, Orland H. Simultaneous Identification of Multiple Binding Sites in Proteins: A Statistical Mechanics Approach. The Journal of Physical Chemistry. B. PMID 33973782 DOI: 10.1021/acs.jpcb.1c02658 |
0.572 |
|
| 2021 |
Koehl P, Delarue M, Orland H. Physics approach to the variable-mass optimal-transport problem. Physical Review. E. 103: 012113. PMID 33601576 DOI: 10.1103/PhysRevE.103.012113 |
0.531 |
|
| 2020 |
Vernizzi G, Nguyen TD, Orland H, Olvera de la Cruz M. Multicanonical Monte Carlo ensemble growth algorithm. Physical Review. E. 101: 021301. PMID 32168705 DOI: 10.1103/Physreve.101.021301 |
0.308 |
|
| 2020 |
Delaney KT, Orland H, Fredrickson GH. Numerical Simulation of Finite-Temperature Field Theory for Interacting Bosons. Physical Review Letters. 124: 070601. PMID 32142318 DOI: 10.1103/Physrevlett.124.070601 |
0.358 |
|
| 2019 |
Koehl P, Delarue M, Orland H. Optimal transport at finite temperature. Physical Review. E. 100: 013310. PMID 31499816 DOI: 10.1103/Physreve.100.013310 |
0.582 |
|
| 2019 |
Koehl P, Delarue M, Orland H. Statistical Physics Approach to the Optimal Transport Problem. Physical Review Letters. 123: 040603. PMID 31491256 DOI: 10.1103/Physrevlett.123.040603 |
0.565 |
|
| 2018 |
Koehl P, Orland H, Delarue M. Numerical Encodings of Amino Acids in Multivariate Gaussian Modeling of Protein Multiple Sequence Alignments. Molecules (Basel, Switzerland). 24. PMID 30597916 DOI: 10.3390/Molecules24010104 |
0.573 |
|
| 2018 |
Le Treut G, Képès F, Orland H. A Polymer Model for the Quantitative Reconstruction of Chromosome Architecture from HiC and GAM Data. Biophysical Journal. 115: 2286-2294. PMID 30527448 DOI: 10.1016/J.Bpj.2018.10.032 |
0.305 |
|
| 2018 |
Levy A, Andelman D, Orland H. Erratum: "Dipolar Poisson-Boltzmann approach to ionic solutions: A mean field and loop expansion analysis" [J. Chem. Phys. 139, 164909 (2013)]. The Journal of Chemical Physics. 149: 109901. PMID 30219001 DOI: 10.1063/1.5052516 |
0.323 |
|
| 2018 |
Adar RM, Markovich T, Levy A, Orland H, Andelman D. Dielectric constant of ionic solutions: Combined effects of correlations and excluded volume. The Journal of Chemical Physics. 149: 054504. PMID 30089391 DOI: 10.1063/1.5042235 |
0.355 |
|
| 2018 |
Li S, Orland H, Zandi R. Self consistent field theory of virus assembly. Journal of Physics. Condensed Matter : An Institute of Physics Journal. PMID 29460850 DOI: 10.1088/1361-648X/Aab0C6 |
0.308 |
|
| 2018 |
Laleman M, Carlon E, Orland H. Transition path time distributions. The Journal of Chemical Physics. 147: 214103. PMID 29221402 DOI: 10.1063/1.5000423 |
0.303 |
|
| 2017 |
Micheletti C, Orland H. Efficient Sampling of Knotting-Unknotting Pathways for Semiflexible Gaussian Chains. Polymers. 9. PMID 30970873 DOI: 10.3390/Polym9060196 |
0.344 |
|
| 2017 |
Delarue M, Koehl P, Orland H. Ab initio sampling of transition paths by conditioned Langevin dynamics. The Journal of Chemical Physics. 147: 152703. PMID 29055326 DOI: 10.1063/1.4985651 |
0.602 |
|
| 2016 |
Markovich T, Andelman D, Orland H. Ionic profiles close to dielectric discontinuities: Specific ion-surface interactions. The Journal of Chemical Physics. 145: 134704. PMID 27782437 DOI: 10.1063/1.4963083 |
0.367 |
|
| 2016 |
Poitevin F, Delarue M, Orland H. Beyond Poisson-Boltzmann: Numerical Sampling of Charge Density Fluctuations. The Journal of Physical Chemistry. B. 120: 6270-7. PMID 27075231 DOI: 10.1021/Acs.Jpcb.6B02650 |
0.734 |
|
| 2015 |
Majumdar SN, Orland H. Effective Langevin equations for constrained stochastic processes Journal of Statistical Mechanics: Theory and Experiment. 2015. DOI: 10.1088/1742-5468/2015/06/P06039 |
0.317 |
|
| 2014 |
Fredrickson GH, Orland H. Dynamics of polymers: a mean-field theory. The Journal of Chemical Physics. 140: 084902. PMID 24588193 DOI: 10.1063/1.4865911 |
0.323 |
|
| 2014 |
Man X, Delaney KT, Villet MC, Orland H, Fredrickson GH. Coherent states formulation of polymer field theory. The Journal of Chemical Physics. 140: 024905. PMID 24437909 DOI: 10.1063/1.4860978 |
0.321 |
|
| 2014 |
Koehl P, Poitevin F, Orland H, Delarue M. Modified Poisson-Boltzmann equations for characterizing biomolecular solvation Journal of Theoretical and Computational Chemistry. 13. DOI: 10.1142/S021963361440001X |
0.753 |
|
| 2014 |
Poitevin F, Sauguet L, Murail S, Baaden M, Corringer P, Koehl P, Orland H, Delarue M. The Dipolar Solvent Model and Its Applications to the Structural Analysis of Low-(SAXS) and High-(CRYSTALLOGRAPHY) Resolution X-Ray Data Biophysical Journal. 106: 663a. DOI: 10.1016/J.Bpj.2013.11.3674 |
0.738 |
|
| 2013 |
Levy A, Andelman D, Orland H. Dipolar Poisson-Boltzmann approach to ionic solutions: a mean field and loop expansion analysis. The Journal of Chemical Physics. 139: 164909. PMID 24182081 DOI: 10.1063/1.4826103 |
0.387 |
|
| 2013 |
Smaoui MR, Poitevin F, Delarue M, Koehl P, Orland H, Waldispühl J. Computational assembly of polymorphic amyloid fibrils reveals stable aggregates. Biophysical Journal. 104: 683-93. PMID 23442919 DOI: 10.1016/J.Bpj.2012.12.037 |
0.703 |
|
| 2012 |
Levy A, Andelman D, Orland H. Dielectric constant of ionic solutions: a field-theory approach. Physical Review Letters. 108: 227801. PMID 23003654 DOI: 10.1103/Physrevlett.108.227801 |
0.361 |
|
| 2012 |
Thébault P, Niedermayer S, Landis S, Chaix N, Guenoun P, Daillant J, Man X, Andelman D, Orland H. Tailoring nanostructures using copolymer nanoimprint lithography. Advanced Materials (Deerfield Beach, Fla.). 24: 1952-5. PMID 22434566 DOI: 10.1002/Adma.201103532 |
0.301 |
|
| 2011 |
Koehl P, Orland H, Delarue M. Adapting Poisson-Boltzmann to the self-consistent mean field theory: application to protein side-chain modeling. The Journal of Chemical Physics. 135: 055104. PMID 21823735 DOI: 10.1063/1.3621831 |
0.614 |
|
| 2011 |
Poitevin F, Orland H, Doniach S, Koehl P, Delarue M. AquaSAXS: a web server for computation and fitting of SAXS profiles with non-uniformally hydrated atomic models. Nucleic Acids Research. 39: W184-9. PMID 21665925 DOI: 10.1093/Nar/Gkr430 |
0.715 |
|
| 2011 |
Einert TR, Orland H, Netz RR. Secondary structure formation of homopolymeric single-stranded nucleic acids including force and loop entropy: implications for DNA hybridization. The European Physical Journal. E, Soft Matter. 34: 55. PMID 21626368 DOI: 10.1140/Epje/I2011-11055-2 |
0.305 |
|
| 2011 |
Orland H. Generating transition paths by Langevin bridges. The Journal of Chemical Physics. 134: 174114. PMID 21548680 DOI: 10.1063/1.3586036 |
0.327 |
|
| 2011 |
Beccara SA, Faccioli P, Sega M, Pederiva F, Garberoglio G, Orland H. Dominant folding pathways of a peptide chain from ab initio quantum-mechanical simulations Journal of Chemical Physics. 134. PMID 21241114 DOI: 10.1063/1.3514149 |
0.309 |
|
| 2011 |
Mallick K, Moshe M, Orland H. A field-theoretic approach to non-equilibrium work identities Journal of Physics a: Mathematical and Theoretical. 44: 095002. DOI: 10.1088/1751-8113/44/9/095002 |
0.34 |
|
| 2011 |
Man X, Andelman D, Orland H, Thébault P, Liu P, Guenoun P, Daillant J, Landis S. Organization of Block Copolymers using NanoImprint Lithography: Comparison of Theory and Experiments Macromolecules. 44: 2206-2211. DOI: 10.1021/Ma102292V |
0.307 |
|
| 2010 |
Bertalan Z, Nishimori H, Orland H. Accelerated stochastic sampling of discrete statistical systems. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 82: 056704. PMID 21230616 DOI: 10.1103/Physreve.82.056704 |
0.342 |
|
| 2010 |
Faccioli P, Lonardi A, Orland H. Dominant reaction pathways in protein folding: A direct validation against molecular dynamics simulations. The Journal of Chemical Physics. 133: 045104. PMID 20687692 DOI: 10.1063/1.3459097 |
0.317 |
|
| 2010 |
Man X, Andelman D, Orland H. Block Copolymer at Nano-Patterned Surfaces Macromolecules. 43: 7261-7268. DOI: 10.1021/Ma1009534 |
0.312 |
|
| 2009 |
Corradini O, Faccioli P, Orland H. Simulating stochastic dynamics using large time steps. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 80: 061112. PMID 20365123 DOI: 10.1103/Physreve.80.061112 |
0.333 |
|
| 2009 |
Koehl P, Orland H, Delarue M. Computing ion solvation free energies using the dipolar Poisson model. The Journal of Physical Chemistry. B. 113: 5694-7. PMID 19385689 DOI: 10.1021/Jp9010907 |
0.602 |
|
| 2009 |
Koehl P, Orland H, Delarue M. Beyond the Poisson-Boltzmann model: modeling biomolecule-water and water-water interactions. Physical Review Letters. 102: 087801. PMID 19257790 DOI: 10.1103/Physrevlett.102.087801 |
0.616 |
|
| 2009 |
Orland H. Accelerated Sampling of Boltzmann Distributions Journal of the Physical Society of Japan. 78: 103002. DOI: 10.1143/Jpsj.78.103002 |
0.316 |
|
| 2009 |
Koehl P, Orland H, Delarue M. Solvation of ion pairs: The poisson-langevin model 2009 International Conference On Signal Processing Systems, Icsps 2009. 917-923. DOI: 10.1109/ICSPS.2009.128 |
0.589 |
|
| 2009 |
Autieri E, Faccioli P, Sega M, Pederiva F, Orland H. Dominant reaction pathways in high-dimensional systems Journal of Chemical Physics. 130. DOI: 10.1063/1.3074271 |
0.336 |
|
| 2008 |
Azuara C, Orland H, Bon M, Koehl P, Delarue M. Incorporating dipolar solvents with variable density in Poisson-Boltzmann electrostatics. Biophysical Journal. 95: 5587-605. PMID 18820239 DOI: 10.1529/Biophysj.108.131649 |
0.596 |
|
| 2007 |
Abrashkin A, Andelman D, Orland H. Dipolar Poisson-Boltzmann equation: ions and dipoles close to charge interfaces. Physical Review Letters. 99: 077801. PMID 17930925 DOI: 10.1103/Physrevlett.99.077801 |
0.378 |
|
| 2007 |
Sega M, Faccioli P, Pederiva F, Garberoglio G, Orland H. Quantitative protein dynamics from dominant folding pathways Physical Review Letters. 99. DOI: 10.1103/Physrevlett.99.118102 |
0.37 |
|
| 2006 |
Faccioli P, Sega M, Pederiva F, Orland H. Dominant pathways in protein folding Physical Review Letters. 97. PMID 17025856 DOI: 10.1103/Physrevlett.97.108101 |
0.37 |
|
| 2006 |
Azuara C, Lindahl E, Koehl P, Orland H, Delarue M. PDB_Hydro: incorporating dipolar solvents with variable density in the Poisson-Boltzmann treatment of macromolecule electrostatics. Nucleic Acids Research. 34: W38-42. PMID 16845031 DOI: 10.1093/Nar/Gkl072 |
0.621 |
|
| 2006 |
Vernizzi G, Ribeca P, Orland H, Zee A. Topology of pseudoknotted homopolymers. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 73: 031902. PMID 16605553 DOI: 10.1103/Physreve.73.031902 |
0.341 |
|
| 2006 |
Burak Y, Orland H. Manning condensation in two dimensions. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 73: 010501. PMID 16486110 DOI: 10.1103/Physreve.73.010501 |
0.353 |
|
| 2005 |
Bauer M, Orland H. Checking for optimal solutions in some NP-complete problems. Physical Review Letters. 95: 107202. PMID 16196960 DOI: 10.1103/Physrevlett.95.107202 |
0.304 |
|
| 2004 |
Burak Y, Andelman D, Orland H. Test-charge theory for the electric double layer. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 70: 016102. PMID 15324124 DOI: 10.1103/Physreve.70.016102 |
0.371 |
|
| 2004 |
Netz RR, Orland H. Variational charge renormalization in charged systems. The European Physical Journal. E, Soft Matter. 11: 301-311. PMID 15011050 DOI: 10.1140/Epje/I2002-10159-0 |
0.328 |
|
| 2001 |
Garel T, Monthus C, Orland H. A simple model for DNA denaturation Europhysics Letters (Epl). 55: 132-138. DOI: 10.1209/Epl/I2001-00391-2 |
0.323 |
|
| 2000 |
Delarue M, Orland H. General formalism for phase combination and phase refinement: a statistical thermodynamics approach in reciprocal space. Acta Crystallographica. Section a, Foundations of Crystallography. 56: 562-74. PMID 11058843 DOI: 10.1107/S0108767300010242 |
0.582 |
|
| 2000 |
Pitard E, Orland H. The role of the energy gap in protein folding dynamics Europhysics Letters (Epl). 49: 169-175. DOI: 10.1209/Epl/I2000-00128-3 |
0.325 |
|
| 2000 |
Borukhov I, Andelman D, Borrega R, Cloitre M, Leibler L, Orland H. Polyelectrolyte Titration: Theory and Experiment The Journal of Physical Chemistry B. 104: 11027-11034. DOI: 10.1021/Jp001892S |
0.335 |
|
| 2000 |
Borukhov I, Andelman D, Orland H. Adsorption of large ions from an electrolyte solution: a modified Poisson–Boltzmann equation Electrochimica Acta. 46: 221-229. DOI: 10.1016/S0013-4686(00)00576-4 |
0.368 |
|
| 2000 |
Netz R, Orland H. Beyond Poisson-Boltzmann: Fluctuation effects and correlation functions The European Physical Journal E. 1: 203. DOI: 10.1007/S101890050023 |
0.368 |
|
| 2000 |
Netz R, Orland H. One and two-component hard-core plasmas The European Physical Journal E - Soft Matter. 1: 67-73. DOI: 10.1007/S101890050008 |
0.318 |
|
| 2000 |
Monthus C, Garel T, Orland H. Copolymer at a selective interface and two-dimensional wetting: a grand canonical approach The European Physical Journal B. 17: 121-130. DOI: 10.1007/Pl00011066 |
0.338 |
|
| 1999 |
Netz RR, Orland H. Field theory for charged fluids and colloids Europhysics Letters (Epl). 45: 726-732. DOI: 10.1209/Epl/I1999-00228-6 |
0.349 |
|
| 1999 |
Borukhov I, Andelman D, Orland H. Effect of Polyelectrolyte Adsorption on Intercolloidal Forces The Journal of Physical Chemistry B. 103: 5042-5057. DOI: 10.1021/Jp990055R |
0.311 |
|
| 1999 |
Franz S, Garel T, Orland H. Overlap properties and adsorption transition of two Hamiltonian paths The European Physical Journal B. 11: 463-468. DOI: 10.1007/S100510050957 |
0.308 |
|
| 1998 |
Pitard E, Orland H. Dynamics of the swelling or collapse of a homopolymer Europhysics Letters (Epl). 41: 467-472. DOI: 10.1209/Epl/I1998-00175-8 |
0.312 |
|
| 1998 |
Hone DW, Orland H. Flexible conducting polymers: An analytic approach The Journal of Chemical Physics. 108: 8725-8735. DOI: 10.1063/1.476301 |
0.357 |
|
| 1998 |
Borukhov I, Andelman D, Orland H. Random polyelectrolytes and polyampholytes in solution The European Physical Journal B. 5: 869-880. DOI: 10.1007/S100510050513 |
0.381 |
|
| 1997 |
Borukhov I, Andelman D, Orland H. Steric Effects in Electrolytes: A Modified Poisson-Boltzmann Equation Physical Review Letters. 79: 435-438. DOI: 10.1103/Physrevlett.79.435 |
0.345 |
|
| 1997 |
Pitard E, Garel T, Orland H. Protein Folding, Anisotropic Collapse and Blue Phases Journal De Physique I. 7: 1201-1210. DOI: 10.1051/Jp1:1997117 |
0.331 |
|
| 1996 |
Garel T, Iori G, Orland H. Variational study of the random-field XY model Physical Review B. 53. PMID 9983890 DOI: 10.1103/Physrevb.53.R2941 |
0.316 |
|
| 1996 |
Doniach S, Garel T, Orland H. Phase diagram of a semiflexible polymer chain in a θ solvent: Application to protein folding Journal of Chemical Physics. 105: 1601-1608. DOI: 10.1063/1.472031 |
0.392 |
|
| 1996 |
Netz RR, Andelman D, Orland H. Protein Adsorption on Lipid Monolayers at their Coexistence Region Journal De Physique Ii. 6: 1023-1047. DOI: 10.1051/Jp2:1996114 |
0.319 |
|
| 1996 |
Orland H, Schick M. Simple Integral Equation for the Polymer Brush Macromolecules. 29: 713-717. DOI: 10.1021/Ma9508461 |
0.344 |
|
| 1995 |
Borukhov I, Andelman D, Orland H. Polyelectrolyte Solutions between Charged Surfaces Europhysics Letters (Epl). 32: 499-504. DOI: 10.1209/0295-5075/32/6/007 |
0.345 |
|
| 1995 |
Orland H, Shapir Y. A disorder-dependent variational method without replicas: Application to the random phase sine-gordon model Epl. 30: 203-208. DOI: 10.1209/0295-5075/30/4/003 |
0.334 |
|
| 1995 |
De Dominicis C, Orland H, Temesvari T. Random Field Ising Model:
Dimensional Reduction or Spin-Glass Phase? Journal De Physique I. 5: 987-1001. DOI: 10.1051/Jp1:1995178 |
0.332 |
|
| 1994 |
Bascle J, Garel T, Orland H, Velikson B. Biasing a Monte Carlo chain growth method with Ramachandran's plot: application to twenty-L-alanine. Biopolymers. 33: 1843-9. PMID 8268410 DOI: 10.1002/Bip.360331210 |
0.322 |
|
| 1993 |
Bascle J, Garel T, Orland H. Formation and stability of secondary structures in globular proteins Journal De Physique Ii. 3: 245-253. DOI: 10.1051/Jp2:1993126 |
0.317 |
|
| 1993 |
Bascle J, Garel T, Orland H. Some physical approaches to protein folding Journal De Physique I. 3: 259-275. DOI: 10.1051/Jp1:1993128 |
0.403 |
|
| 1993 |
Velikson B, Bascle J, Garel T, Orland H. Structural and ultrametric properties of (L-alanine)20 Macromolecules. 26: 4791-4799. DOI: 10.1021/Ma00070A010 |
0.311 |
|
| 1993 |
Andelman D, Orland H. Chiral discrimination in solutions and in Langmuir monolayers Journal of the American Chemical Society. 115: 12322-12329. DOI: 10.1021/Ja00079A012 |
0.302 |
|
| 1992 |
Bascle J, Garel T, Orland H. Mean-field theory of polymer melting Journal of Physics a: Mathematical and General. 25: L1323-L1329. DOI: 10.1088/0305-4470/25/23/010 |
0.312 |
|
| 1989 |
Garel T, Huse DA, Leibler S, Orland H. Localization transition of random chains at interfaces Epl. 8: 9-13. DOI: 10.1209/0295-5075/8/1/002 |
0.338 |
|
| 1989 |
Garel J, Garel T, Orland H. Statistical mechanics model of protein folding : short and long chains have different folding transitions Journal De Physique. 50: 3067-3074. DOI: 10.1051/Jphys:0198900500200306700 |
0.312 |
|
| 1988 |
Garel T, Orland H. Chemical Sequence and Spatial Structure in Simple Models of Biopolymers Europhysics Letters (Epl). 6: 597-601. DOI: 10.1209/0295-5075/6/7/005 |
0.353 |
|
| 1988 |
Garel T, Orland H. Mean-Field Model for Protein Folding Europhysics Letters (Epl). 6: 307-310. DOI: 10.1209/0295-5075/6/4/005 |
0.376 |
|
| 1988 |
Schulz U, Villain J, Br�zin E, Orland H. Thermal fluctuations in some random field models Journal of Statistical Physics. 51: 1-27. DOI: 10.1007/Bf01015318 |
0.329 |
|
| 1983 |
Leibler L, Orland H, Wheeler JC. Theory of critical micelle concentration for solutions of block copolymers The Journal of Chemical Physics. 79: 3550-3557. DOI: 10.1063/1.446209 |
0.329 |
|
| 1981 |
Blaizot JP, Orland H. Path integrals for the nuclear many-body problem Physical Review C. 24: 1740-1761. DOI: 10.1103/Physrevc.24.1740 |
0.324 |
|
| 1981 |
Orland H, de Dominicis C, Garel T. Non-homogeneous mean field picture for spin-glasses Journal De Physique Lettres. 42: 73-77. DOI: 10.1051/Jphyslet:0198100420407300 |
0.306 |
|
| 1981 |
Blaizot J, Orland H. Path integrals, boson expansions and the time dependent mean-field approximations Physics Letters B. 100: 195-200. DOI: 10.1016/0370-2693(81)90315-4 |
0.309 |
|
| 1980 |
Blaizot J, Orland H. Path integrals and time-dependent mean-field theories Journal De Physique Lettres. 41: 53-56. DOI: 10.1051/Jphyslet:0198000410305300 |
0.319 |
|
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