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Pritam Ganguly - Publications

Affiliations: 
University of California, Santa Barbara, Santa Barbara, CA, United States 
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23 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Vigers MP, Lobo S, Najafi S, Dubose A, Tsay K, Ganguly P, Longhini AP, Jin Y, Buratto SK, Kosik KS, Shell MS, Shea JE, Han S. Tau P301L mutation promotes core 4R tauopathy fibril fold through near-surface water structuring and conformational rearrangement. Biorxiv : the Preprint Server For Biology. PMID 38077065 DOI: 10.1101/2023.11.28.568818  0.451
2023 Arsiccio A, Liu X, Ganguly P, Buratto SK, Bowers MT, Shea JE. Effect of Cosolutes on the Aggregation of a Tau Fragment: A Combined Experimental and Simulation Approach. The Journal of Physical Chemistry. B. 127: 4022-4031. PMID 37129599 DOI: 10.1021/acs.jpcb.3c00433  0.524
2022 Ganguly P, Bubák D, Polák J, Fagan P, Dračínský M, van der Vegt NFA, Heyda J, Shea JE. Cosolvent Exclusion Drives Protein Stability in Trimethylamine -Oxide and Betaine Solutions. The Journal of Physical Chemistry Letters. 7980-7986. PMID 35984361 DOI: 10.1021/acs.jpclett.2c01692  0.545
2022 Liu X, Ganguly P, Jin Y, Jhatro MJ, Shea JE, Buratto SK, Bowers MT. Tachykinin Neuropeptides and Amyloid β (25-35) Assembly: Friend or Foe? Journal of the American Chemical Society. PMID 35917596 DOI: 10.1021/jacs.2c03845  0.459
2022 Arsiccio A, Ganguly P, Shea JE. A Transfer Free Energy Based Implicit Solvent Model for Protein Simulations in Solvent Mixtures: Urea-Induced Denaturation as a Case Study. The Journal of Physical Chemistry. B. PMID 35679169 DOI: 10.1021/acs.jpcb.2c00889  0.546
2021 Laos V, Bishop D, Ganguly P, Schonfeld G, Trapp E, Cantrell KL, Buratto SK, Shea JE, Bowers MT. Catalytic Cross Talk between Key Peptide Fragments That Couple Alzheimer's Disease with Amyotrophic Lateral Sclerosis. Journal of the American Chemical Society. PMID 33621087 DOI: 10.1021/jacs.0c12729  0.505
2021 Nguyen PH, Ramamoorthy A, Sahoo BR, Zheng J, Faller P, Straub JE, Dominguez L, Shea JE, Dokholyan NV, De Simone A, Ma B, Nussinov R, Najafi S, Ngo ST, Loquet A, ... ... Ganguly P, et al. Amyloid Oligomers: A Joint Experimental/Computational Perspective on Alzheimer's Disease, Parkinson's Disease, Type II Diabetes, and Amyotrophic Lateral Sclerosis. Chemical Reviews. PMID 33543942 DOI: 10.1021/acs.chemrev.0c01122  0.673
2020 Arya S, Ganguly P, Arsiccio A, Claud SL, Trapp B, Schonfeld GE, Liu X, Lazar Cantrell KL, Shea JE, Bowers MT. Terminal capping of an amyloidogenic Tau fragment modulates its fibrillation propensity. The Journal of Physical Chemistry. B. PMID 32816481 DOI: 10.1021/Acs.Jpcb.0C05768  0.536
2020 Arsiccio A, Ganguly P, La Cortiglia L, Shea JE, Pisano R. The ADD Force Field for Sugars and Polyols: Predicting the Additivity of Protein-Osmolyte Interaction. The Journal of Physical Chemistry. B. PMID 32790371 DOI: 10.1021/Acs.Jpcb.0C05345  0.566
2020 Ganguly P, Polak J, van der Vegt NFA, Heyda J, Shea JE. Protein Stability in TMAO and Mixed Urea-TMAO Solutions. The Journal of Physical Chemistry. B. PMID 32495623 DOI: 10.1021/Acs.Jpcb.0C04357  0.584
2019 Ganguly P, Shea JE. Distinct and Non-additive Effects of Urea and Guanidinium Chloride on Peptide-Solvation. The Journal of Physical Chemistry Letters. PMID 31721587 DOI: 10.1021/Acs.Jpclett.9B03004  0.56
2017 Ganguly P, Boserman P, van der Vegt NFA, Shea JE. Trimethylamine N-oxide Counteracts Urea Denaturation by Inhibiting Protein-Urea Preferential Interaction. Journal of the American Chemical Society. PMID 29214802 DOI: 10.1021/Jacs.7B11695  0.615
2017 Eschmann NA, Georgieva ER, Ganguly P, Borbat PP, Rappaport MD, Akdogan Y, Freed JH, Shea JE, Han S. Signature of an aggregation-prone conformation of tau. Scientific Reports. 7: 44739. PMID 28303942 DOI: 10.1038/Srep44739  0.515
2016 Ganguly P, van der Vegt NF, Shea JE. Hydrophobic Association in Mixed Urea-TMAO Solutions. The Journal of Physical Chemistry Letters. PMID 27440555 DOI: 10.1021/Acs.Jpclett.6B01344  0.74
2015 Ganguly P, Hajari T, Shea JE, van der Vegt NF. Correction to "Mutual Exclusion of Urea and Trimethylamine N-Oxide from Amino Acids in Mixed Solvent Environment". The Journal of Physical Chemistry Letters. 4728-4729. PMID 26570993 DOI: 10.1021/Acs.Jpclett.5B02536  0.696
2015 Ganguly P, Hajari T, Shea JE, van der Vegt NF. Mutual Exclusion of Urea and Trimethylamine N-Oxide from Amino Acids in Mixed Solvent Environment. The Journal of Physical Chemistry Letters. 6: 581-5. PMID 26262470 DOI: 10.1021/Jz502634K  0.732
2015 Ganguly P, Do TD, Larini L, LaPointe NE, Sercel AJ, Shade MF, Feinstein SC, Bowers MT, Shea JE. Tau assembly: the dominant role of PHF6 (VQIVYK) in microtubule binding region repeat R3. The Journal of Physical Chemistry. B. 119: 4582-93. PMID 25775228 DOI: 10.1021/Acs.Jpcb.5B00175  0.493
2014 Ganguly P, Hajari T, van der Vegt NF. Molecular simulation study on Hofmeister cations and the aqueous solubility of benzene. The Journal of Physical Chemistry. B. 118: 5331-9. PMID 24792435 DOI: 10.1021/Jp5011154  0.74
2013 Ganguly P, van der Vegt NF. Representability and Transferability of Kirkwood-Buff Iterative Boltzmann Inversion Models for Multicomponent Aqueous Systems. Journal of Chemical Theory and Computation. 9: 5247-56. PMID 26592264 DOI: 10.1021/Ct400242R  0.684
2013 Ganguly P, van der Vegt NF. Convergence of Sampling Kirkwood-Buff Integrals of Aqueous Solutions with Molecular Dynamics Simulations. Journal of Chemical Theory and Computation. 9: 1347-55. PMID 26587597 DOI: 10.1021/Ct301017Q  0.652
2012 Ganguly P, Mukherji D, Junghans C, van der Vegt NF. Kirkwood-Buff Coarse-Grained Force Fields for Aqueous Solutions. Journal of Chemical Theory and Computation. 8: 1802-7. PMID 26593671 DOI: 10.1021/Ct3000958  0.681
2012 Hajari T, Ganguly P, van der Vegt NF. Enthalpy-Entropy of Cation Association with the Acetate Anion in Water. Journal of Chemical Theory and Computation. 8: 3804-9. PMID 26593021 DOI: 10.1021/Ct300074D  0.726
2011 Ganguly P, Schravendijk P, Hess B, van der Vegt NF. Ion pairing in aqueous electrolyte solutions with biologically relevant anions. The Journal of Physical Chemistry. B. 115: 3734-9. PMID 21410261 DOI: 10.1021/Jp201150Q  0.697
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