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Gregory T. Reeves - Publications

Affiliations: 
2008 Princeton University, Princeton, NJ 
 2010-2020 Chemical and Biomolecular Engineering North Carolina State University, Raleigh, NC 
 2020- Chemical Engineering Texas A & M University, College Station, TX, United States 
Website:
https://reeveslab.engr.tamu.edu/
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26/50 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Shaikh R, Larson NJ, Hanjaya-Putra D, Zartman J, Umulis DM, Li L, Reeves GT. Optimal Performance Objectives in the Highly Conserved Bone Morphogenetic Protein Signaling Pathway. Biorxiv : the Preprint Server For Biology. PMID 38370840 DOI: 10.1101/2024.02.01.578451  0.627
2023 Bandodkar P, Shaikh R, Reeves GT. ISRES+: An improved evolutionary strategy for function minimization to estimate the free parameters of systems biology models. Bioinformatics (Oxford, England). PMID 37354523 DOI: 10.1093/bioinformatics/btad403  0.704
2020 Jacobsen T, Yi G, Al Asafen H, Jermusyk AA, Beisel CL, Reeves GT. Tunable self-cleaving ribozymes for modulating gene expression in eukaryotic systems. Plos One. 15: e0232046. PMID 32352996 DOI: 10.1371/Journal.Pone.0232046  0.748
2020 Al Asafen H, Bandodkar PU, Carrell-Noel S, Schloop AE, Friedman J, Reeves GT. Robustness of the Dorsal morphogen gradient with respect to morphogen dosage. Plos Computational Biology. 16: e1007750. PMID 32251432 DOI: 10.1371/Journal.Pcbi.1007750  0.766
2020 Schloop AE, Bandodkar PU, Reeves GT. Formation, interpretation, and regulation of the Drosophila Dorsal/NF-κB gradient. Current Topics in Developmental Biology. 137: 143-191. PMID 32143742 DOI: 10.1016/Bs.Ctdb.2019.11.007  0.761
2020 Schloop AE, Carrell-Noel S, Friedman J, Thomas A, Reeves GT. Mechanism and implications of morphogen shuttling: Lessons learned from dorsal and Cactus in Drosophila. Developmental Biology. PMID 31987808 DOI: 10.1016/J.Ydbio.2020.01.011  0.417
2020 Bandodkar PU, Al Asafen H, Reeves GT. Spatiotemporal control of gene expression boundaries using a feedforward loop. Developmental Dynamics : An Official Publication of the American Association of Anatomists. PMID 31925874 DOI: 10.1096/Fasebj.2020.34.S1.00347  0.739
2019 Reeves GT. The engineering principles of combining a transcriptional incoherent feedforward loop with negative feedback. Journal of Biological Engineering. 13: 62. PMID 31333758 DOI: 10.1186/S13036-019-0190-3  0.336
2017 Carrell SN, O'Connell MD, Jacobsen T, Allen AE, Smith SM, Reeves GT. A facilitated diffusion mechanism establishes the Drosophila Dorsal gradient. Development (Cambridge, England). PMID 29097443 DOI: 10.1242/Dev.155549  0.784
2016 Jermusyk AA, Murphy NP, Reeves GT. Analyzing negative feedback using a synthetic gene network expressed in the Drosophila melanogaster embryo. Bmc Systems Biology. 10: 85. PMID 27576572 DOI: 10.1186/S12918-016-0330-Z  0.761
2015 O'Connell MD, Reeves GT. The presence of nuclear cactus in the early Drosophila embryo may extend the dynamic range of the dorsal gradient. Plos Computational Biology. 11: e1004159. PMID 25879657 DOI: 10.1371/Journal.Pcbi.1004159  0.517
2015 Carrell SN, Reeves GT. Imaging the dorsal-ventral axis of live and fixed Drosophila melanogaster embryos. Methods in Molecular Biology (Clifton, N.J.). 1189: 63-78. PMID 25245687 DOI: 10.1007/978-1-4939-1164-6_5  0.708
2013 Garcia M, Nahmad M, Reeves GT, Stathopoulos A. Size-dependent regulation of dorsal-ventral patterning in the early Drosophila embryo. Developmental Biology. 381: 286-99. PMID 23800450 DOI: 10.1016/J.Ydbio.2013.06.020  0.682
2013 Trisnadi N, Altinok A, Stathopoulos A, Reeves GT. Image analysis and empirical modeling of gene and protein expression. Methods (San Diego, Calif.). 62: 68-78. PMID 23104159 DOI: 10.1016/J.Ymeth.2012.09.016  0.669
2013 Jermusyk AA, Reeves GT. Using a synthetic gene network to model and understand the effects of shuttling on gene expression patterns Food, Pharmaceutical and Bioengineering Division 2013 - Core Programming Area At the 2013 Aiche Annual Meeting: Global Challenges For Engineering a Sustainable Future. 36-37.  0.356
2012 Reeves GT, Trisnadi N, Truong TV, Nahmad M, Katz S, Stathopoulos A. Dorsal-ventral gene expression in the Drosophila embryo reflects the dynamics and precision of the dorsal nuclear gradient. Developmental Cell. 22: 544-57. PMID 22342544 DOI: 10.1016/J.Devcel.2011.12.007  0.703
2011 Nahmad M, Reeves G, Stathopoulos A. Program/Abstract # 44Size-dependent regulation of dorsal-ventral patterning in the early Drosophila embryo Developmental Biology. 356. DOI: 10.1016/J.Ydbio.2011.05.061  0.62
2010 McMahon A, Reeves GT, Supatto W, Stathopoulos A. Mesoderm migration in Drosophila is a multi-step process requiring FGF signaling and integrin activity. Development (Cambridge, England). 137: 2167-75. PMID 20530544 DOI: 10.1242/Dev.051573  0.611
2009 Reeves GT, Stathopoulos A. Graded dorsal and differential gene regulation in the Drosophila embryo. Cold Spring Harbor Perspectives in Biology. 1: a000836. PMID 20066095 DOI: 10.1101/Cshperspect.A000836  0.705
2009 Liberman LM, Reeves GT, Stathopoulos A. Quantitative imaging of the Dorsal nuclear gradient reveals limitations to threshold-dependent patterning in Drosophila. Proceedings of the National Academy of Sciences of the United States of America. 106: 22317-22. PMID 20018754 DOI: 10.1073/Pnas.0906227106  0.701
2006 Reeves GT, Muratov CB, Schüpbach T, Shvartsman SY. Quantitative models of developmental pattern formation. Developmental Cell. 11: 289-300. PMID 16950121 DOI: 10.1016/J.Devcel.2006.08.006  0.597
2006 Goentoro LA, Reeves GT, Kowal CP, Martinelli L, Schüpbach T, Shvartsman SY. Quantifying the Gurken morphogen gradient in Drosophila oogenesis. Developmental Cell. 11: 263-72. PMID 16890165 DOI: 10.1016/J.Devcel.2006.07.004  0.756
2005 Reeves GT, Kalifa R, Klein DE, Lemmon MA, Shvartsman SY. Computational analysis of EGFR inhibition by Argos. Developmental Biology. 284: 523-35. PMID 15982648 DOI: 10.1016/J.Ydbio.2005.05.013  0.566
2005 Reeves GT, Kalifa R, Klein DE, Alvarado D, Duffy JB, Lemmon MA, Shvartsman S. Computational, genetic, and biochemical analysis of Egfr control by multiple feedback loops Aiche Annual Meeting, Conference Proceedings. 8301.  0.467
2005 Reeves GT, Muratov CB, Shvartsman S. Multiscale analysis of feedback control in epithelial patterning systems Aiche Annual Meeting, Conference Proceedings. 11666.  0.522
2004 Klein DE, Nappi VM, Reeves GT, Shvartsman SY, Lemmon MA. Argos inhibits epidermal growth factor receptor signalling by ligand sequestration. Nature. 430: 1040-4. PMID 15329724 DOI: 10.1038/Nature02840  0.565
Low-probability matches (unlikely to be authored by this person)
2009 Reeves GT, Fraser SE. Biological systems from an engineer's point of view. Plos Biology. 7: e21. PMID 19166272 DOI: 10.1371/Journal.Pbio.1000021  0.279
2016 Reeves G, Grangé-Guermente MJ, Hibberd JM. Regulatory gateways for cell-specific gene expression in C4 leaves with Kranz anatomy. Journal of Experimental Botany. 68: 107-116. PMID 27940469 DOI: 10.1093/jxb/erw438  0.266
2004 Pilyugin SS, Reeves GT, Narang A. Predicting stability of mixed microbial cultures from single species experiments: 2. Physiological model. Mathematical Biosciences. 192: 111-36. PMID 15627489 DOI: 10.1016/J.Mbs.2004.10.002  0.252
2004 Reeves GT, Narang A, Pilyugin SS. Growth of mixed cultures on mixtures of substitutable substrates: the operating diagram for a structured model. Journal of Theoretical Biology. 226: 143-57. PMID 14643184 DOI: 10.1016/S0022-5193(03)00280-7  0.249
2014 Jermusyk AA, Reeves GT. Analyzing negative feedback and shuttling using a synthetic gene network Food, Pharmaceutical and Bioengineering Division 2014 - Core Programming Area At the 2014 Aiche Annual Meeting. 2: 1103-1104.  0.246
2003 Shoemaker J, Reeves GT, Gupta S, Pilyugin SS, Egli T, Narang A. The dynamics of single-substrate continuous cultures: the role of transport enzymes. Journal of Theoretical Biology. 222: 307-22. PMID 12732477 DOI: 10.1016/S0022-5193(03)00036-5  0.233
2018 Reyna-Llorens I, Burgess SJ, Reeves G, Singh P, Stevenson SR, Williams BP, Stanley S, Hibberd JM. Ancient duons may underpin spatial patterning of gene expression in C4 leaves. Proceedings of the National Academy of Sciences of the United States of America. PMID 29432183 DOI: 10.1073/pnas.1720576115  0.231
2013 Carrell S, Reeves GT. Novel interactions between the NF-kB and BMP signaling pathways in the D. Melanogaster embryo Food, Pharmaceutical and Bioengineering Division 2013 - Core Programming Area At the 2013 Aiche Annual Meeting: Global Challenges For Engineering a Sustainable Future. 376-377.  0.191
2023 Singh P, Stevenson SR, Dickinson PJ, Reyna-Llorens I, Tripathi A, Reeves G, Schreier TB, Hibberd JM. C gene induction during de-etiolation evolved through changes in cis to allow integration with ancestral C gene regulatory networks. Science Advances. 9: eade9756. PMID 36989352 DOI: 10.1126/sciadv.ade9756  0.18
2019 Itakura AK, Chan KX, Atkinson N, Pallesen L, Wang L, Reeves G, Patena W, Caspari O, Roth R, Goodenough U, McCormick AJ, Griffiths H, Jonikas MC. A Rubisco-binding protein is required for normal pyrenoid number and starch sheath morphology in . Proceedings of the National Academy of Sciences of the United States of America. PMID 31455733 DOI: 10.1073/Pnas.1904587116  0.163
2013 Reeves G, Monroy-Barbosa A, Bosland PW. A novel Capsicum gene inhibits host-specific disease resistance to Phytophthora capsici. Phytopathology. 103: 472-8. PMID 23577838 DOI: 10.1094/PHYTO-09-12-0242-R  0.143
2014 Kim S, Park M, Yeom SI, Kim YM, Lee JM, Lee HA, Seo E, Choi J, Cheong K, Kim KT, Jung K, Lee GW, Oh SK, Bae C, Kim SB, ... ... Reeves G, et al. Genome sequence of the hot pepper provides insights into the evolution of pungency in Capsicum species. Nature Genetics. 46: 270-8. PMID 24441736 DOI: 10.1038/Ng.2877  0.113
2020 Bowen JD, Schloop AE, Reeves GT, Menegatti S, Rao BM. Discovery of membrane-permeating cyclic peptides via mRNA display. Bioconjugate Chemistry. PMID 32786364 DOI: 10.1021/Acs.Bioconjchem.0C00413  0.112
2004 Pilyugin SS, Reeves GT, Narang A. Predicting stability of mixed microbial cultures from single species experiments: 1. Phenomenological model. Mathematical Biosciences. 192: 85-109. PMID 15627488 DOI: 10.1016/j.mbs.2004.10.003  0.105
2013 Hwang DG, Park JH, Lim JY, Kim D, Choi Y, Kim S, Reeves G, Yeom SI, Lee JS, Park M, Kim S, Choi IY, Choi D, Shin C. The hot pepper (Capsicum annuum) microRNA transcriptome reveals novel and conserved targets: a foundation for understanding MicroRNA functional roles in hot pepper. Plos One. 8: e64238. PMID 23737975 DOI: 10.1371/Journal.Pone.0064238  0.099
2018 Reeves G, Singh P, Rossberg TA, Sogbohossou D, Schranz ME, Hibberd JM. Natural variation within a species for traits underpinning C4 photosynthesis. Plant Physiology. PMID 29678862 DOI: 10.1104/pp.18.00168  0.098
2021 Reeves G, Tripathi A, Singh P, Jones MRW, Nanda AK, Musseau C, Craze M, Bowden S, Walker JF, Bentley AR, Melnyk CW, Hibberd JM. Monocotyledonous plants graft at the embryonic root-shoot interface. Nature. PMID 34937943 DOI: 10.1038/s41586-021-04247-y  0.097
2022 McArthur N, Cruz-Teran C, Thatavarty A, Reeves GT, Rao BM. Experimental and Analytical Framework for "Mix-and-Read" Assays Based on Split Luciferase. Acs Omega. 7: 24551-24560. PMID 35874239 DOI: 10.1021/acsomega.2c02319  0.086
2021 Simpson CJC, Reeves G, Tripathi A, Singh P, Hibberd JM. Using breeding and quantitative genetics to understand the C4 pathway. Journal of Experimental Botany. PMID 34747993 DOI: 10.1093/jxb/erab486  0.084
2016 Mackinder LC, Meyer MT, Mettler-Altmann T, Chen VK, Mitchell MC, Caspari O, Freeman Rosenzweig ES, Pallesen L, Reeves G, Itakura A, Roth R, Sommer F, Geimer S, Mühlhaus T, Schroda M, et al. A repeat protein links Rubisco to form the eukaryotic carbon-concentrating organelle. Proceedings of the National Academy of Sciences of the United States of America. PMID 27166422 DOI: 10.1073/Pnas.1522866113  0.081
2020 Singh P, Reeves G. Constructing the bundle sheath towards enhanced photosynthesis. Journal of Experimental Botany. 71: 1206-1209. PMID 32076726 DOI: 10.1093/jxb/erz537  0.042
2014 Reeves GT, Addison AW, Zeller M, Hunter AD. Ru(II) thioether complexes with dangling pyridine ligands Polyhedron. 68: 70-75. DOI: 10.1016/J.Poly.2013.10.001  0.035
2015 Reeves GT, Addison AW, Zeller M. Ruthenium(II) complexes of some simple classic amine ligands Inorganica Chimica Acta. 432: 185-191. DOI: 10.1016/J.Ica.2015.04.007  0.023
2015 Reeves G, Hibberd JM. Broadening the Spectrum of Photosynthesis in the grass, Alloteropsis semialata: COMMENTARY on Lundgren et al. 'Evolutionary Implications of C3 -C4 intermediates in the grass Alloteropsis semialata'. Plant, Cell & Environment. PMID 26641208 DOI: 10.1111/pce.12685  0.01
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