Liangsheng Zhang - Publications

Affiliations: 
Zhejiang University, Hangzhou Shi, Zhejiang Sheng, China 

70 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Liu N, Lyu X, Zhang X, Zhang G, Zhang Z, Guan X, Chen X, Yang X, Feng Z, Gao Q, Shi W, Deng Y, Sheng K, Ou J, Zhu Y, ... ... Zhang L, et al. Reference genome sequence and population genomic analysis of peas provide insights into the genetic basis of Mendelian and other agronomic traits. Nature Genetics. PMID 39103648 DOI: 10.1038/s41588-024-01867-8  0.417
2023 Wang Z, Zhou J, Pan J, Cheng W, Fang J, Lv Q, Lin X, Cheng W, Zhang L, Cheng K. Insights into the Superrosids phylogeny and flavonoid synthesis from the telomere-to-telomere gap-free genome assembly of Pursh. Horticulture Research. 11: uhad274. PMID 38344651 DOI: 10.1093/hr/uhad274  0.438
2023 Li S, Wei L, Gao Q, Xu M, Wang Y, Lin Z, Holford P, Chen ZH, Zhang L. Molecular and phylogenetic evidence of parallel expansion of anion channels in plants. Plant Physiology. PMID 38142233 DOI: 10.1093/plphys/kiad687  0.695
2023 Li X, Yu S, Cheng Z, Chang X, Yun Y, Jiang M, Chen X, Wen X, Li H, Zhu W, Xu S, Xu Y, Wang X, Zhang C, Wu Q, ... ... Zhang L, et al. Origin and evolution of the triploid cultivated banana genome. Nature Genetics. PMID 38082204 DOI: 10.1038/s41588-023-01589-3  0.751
2023 Li D, Lin HY, Wang X, Bi B, Gao Y, Shao L, Zhang R, Liang Y, Xia Y, Zhao YP, Zhou X, Zhang L. Genome and whole-genome resequencing of Cinnamomum camphora elucidate its dominance in subtropical urban landscapes. Bmc Biology. 21: 192. PMID 37697363 DOI: 10.1186/s12915-023-01692-1  0.584
2023 Hu R, Li X, Hu Y, Zhang R, Lv Q, Zhang M, Sheng X, Zhao F, Chen Z, Ding Y, Yuan H, Wu X, Xing S, Yan X, Bao F, ... ... Zhang L, et al. Adaptive evolution of the enigmatic Takakia now facing climate change in Tibet. Cell. PMID 37562403 DOI: 10.1016/j.cell.2023.07.003  0.629
2023 Chao J, Wu S, Shi M, Xu X, Gao Q, Du H, Gao B, Guo D, Yang S, Zhang S, Li Y, Fan X, Hai C, Kou L, Zhang J, ... ... Zhang L, et al. Genomic insight into domestication of rubber tree. Nature Communications. 14: 4651. PMID 37532727 DOI: 10.1038/s41467-023-40304-y  0.418
2023 Qi H, Yu F, Deng J, Zhang L, Yang P. The high-quality genome of lotus reveals tandem duplicate genes involved in stress response and secondary metabolites biosynthesis. Horticulture Research. 10: uhad040. PMID 37159801 DOI: 10.1093/hr/uhad040  0.334
2023 Liu H, Liu X, Chang X, Chen F, Lin Z, Zhang L. Large-scale analyses of angiosperm genes reveal duplication and functional divergence in monocots. Frontiers in Plant Science. 13: 1039500. PMID 36684773 DOI: 10.3389/fpls.2022.1039500  0.712
2022 Han D, Li W, Hou Z, Lin C, Xie Y, Zhou X, Gao Y, Huang J, Lai J, Wang L, Zhang L, Yang C. The chromosome-scale assembly of the Salvia rosmarinus genome provides insight into carnosic acid biosynthesis. The Plant Journal : For Cell and Molecular Biology. PMID 36579923 DOI: 10.1111/tpj.16087  0.44
2022 Shao G, He T, Mu Y, Mu P, Ao J, Lin X, Ruan L, Wang Y, Gao Y, Liu D, Zhang L, Chen X. The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments. Iscience. 25: 105545. PMID 36444293 DOI: 10.1016/j.isci.2022.105545  0.335
2022 Xu M, Gao Q, Jiang M, Wang W, Hu J, Chang X, Liu D, Liang Y, Jiang Y, Chen F, Li C, Huang H, Chen F, Li F, Trigiano RN, ... ... Zhang L, et al. The nearly complete genome sequence of Jasminum sambac reveals the molecular mechanism underlying the accumulation of jasmonates. Journal of Experimental Botany. PMID 36433929 DOI: 10.1093/jxb/erac464  0.674
2022 Xu T, Zhang J, Shao L, Wang X, Zhang R, Ji C, Xia Y, Zhang L, Zhang J, Li D. Later Growth Cessation and Increased Freezing Tolerance Potentially Result in Later Dormancy in Evergreen Iris Compared with Deciduous Iris. International Journal of Molecular Sciences. 23. PMID 36232426 DOI: 10.3390/ijms231911123  0.363
2022 Li F, Gao Y, Jin C, Wen X, Geng H, Cheng Y, Qu H, Liu X, Feng S, Zhang F, Ruan J, Yang C, Zhang L, Wang J. The chromosome-level genome of reveals the molecular mechanism of floral development and ethylene insensitivity. Horticulture Research. 9: uhac176. PMID 36204200 DOI: 10.1093/hr/uhac176  0.425
2022 Zhou G, Yin H, Chen F, Wang Y, Gao Q, Yang F, He C, Zhang L, Wan Y. The genome of Areca catechu provides insights into sex determination of monoecious plants. The New Phytologist. PMID 36089819 DOI: 10.1111/nph.18471  0.323
2022 Liang Y, Li F, Gao Q, Jin C, Dong L, Wang Q, Xu M, Sun F, Bi B, Zhao P, Li S, Ruan J, Zhou X, Zhang L, Wang J. The genome of Eustoma grandiflorum reveals the whole-genome triplication event contributing to ornamental traits in cultivated lisianthus. Plant Biotechnology Journal. PMID 35880287 DOI: 10.1111/pbi.13899  0.611
2022 Zhang B, Wang Z, Han X, Liu X, Wang Q, Zhang J, Zhao H, Tang J, Luo K, Zhai Z, Zhou J, Liu P, He W, Luo H, Yu S, ... ... Zhang L, et al. The chromosome-scale assembly of endive (Cichorium endivia) genome provides insights into the sesquiterpenoid biosynthesis. Genomics. 110400. PMID 35691507 DOI: 10.1016/j.ygeno.2022.110400  0.466
2022 Wu Y, Wen J, Xia Y, Zhang L, Du H. Evolution and functional diversification of R2R3-MYB transcription factors in plants. Horticulture Research. 9: uhac058. PMID 35591925 DOI: 10.1093/hr/uhac058  0.451
2022 Liu Y, Wang S, Li L, Yang T, Dong S, Wei T, Wu S, Liu Y, Gong Y, Feng X, Ma J, Chang G, Huang J, Yang Y, Wang H, ... ... Zhang L, et al. The Cycas genome and the early evolution of seed plants. Nature Plants. PMID 35437001 DOI: 10.1038/s41477-022-01129-7  0.637
2022 Wen X, Li J, Wang L, Lu C, Gao Q, Xu P, Pu Y, Zhang Q, Hong Y, Hong L, Huang H, Xin H, Wu X, Kang D, Gao K, ... ... Zhang L, et al. The chrysanthemum lavandulifolium genome and the molecular mechanism underlying diverse capitulum types. Horticulture Research. PMID 35039834 DOI: 10.1093/hr/uhab022  0.408
2022 Li L, Chen X, Fang D, Dong S, Guo X, Li N, Campos-Dominguez L, Wang W, Liu Y, Lang X, Peng Y, Tian D, Thomas DC, Mu W, Liu M, ... ... Zhang L, et al. Genomes shed light on the evolution of Begonia, a mega-diverse genus. The New Phytologist. PMID 34997964 DOI: 10.1111/nph.17949  0.412
2021 Li D, Shao L, Zhang J, Wang X, Zhang D, Horvath DP, Zhang L, Zhang J, Xia Y. MADS-box transcription factors determine the duration of temporary winter dormancy in closely related evergreen and deciduous Iris spp. Journal of Experimental Botany. PMID 34752617 DOI: 10.1093/jxb/erab484  0.334
2021 Wang X, Gao Y, Wu X, Wen X, Li D, Zhou H, Li Z, Liu B, Wei J, Chen F, Chen F, Zhang C, Zhang L, Xia Y. High-quality evergreen azalea genome reveals tandem duplication-facilitated low-altitude adaptability and floral scent evolution. Plant Biotechnology Journal. PMID 34375461 DOI: 10.1111/pbi.13680  0.402
2021 Chen F, Su L, Hu S, Xue JY, Liu H, Liu G, Jiang Y, Du J, Qiao Y, Fan Y, Liu H, Yang Q, Lu W, Shao ZQ, Zhang J, ... Zhang L, et al. A chromosome-level genome assembly of rugged rose (Rosa rugosa) provides insights into its evolution, ecology, and floral characteristics. Horticulture Research. 8: 141. PMID 34145222 DOI: 10.1038/s41438-021-00594-z  0.41
2021 Hu J, Chang X, Zhang Y, Yu X, Qin Y, Sun Y, Zhang L. The pineapple MADS-box gene family and the evolution of early monocot flower. Scientific Reports. 11: 849. PMID 33441609 DOI: 10.1038/s41598-020-79163-8  0.366
2020 Chang X, Xie S, Wei L, Lu Z, Chen ZH, Chen F, Lai Z, Lin Z, Zhang L. Origins and Stepwise Expansion of R2R3-MYB Transcription Factors for the Terrestrial Adaptation of Plants. Frontiers in Plant Science. 11: 575360. PMID 33424877 DOI: 10.3389/fpls.2020.575360  0.692
2020 Liang Y, Wang S, Zhao C, Ma X, Zhao Y, Shao J, Li Y, Li H, Song H, Ma H, Li H, Zhang B, Zhang L. Transcriptional regulation of bark freezing tolerance in apple (Malus domestica Borkh.). Horticulture Research. 7: 205. PMID 33328456 DOI: 10.1038/s41438-020-00432-8  0.438
2020 Chen X, Tong C, Zhang X, Song A, Hu M, Dong W, Chen F, Wang Y, Tu J, Liu S, Tang H, Zhang L. A high-quality Brassica napus genome reveals expansion of transposable elements, subgenome evolution and disease resistance. Plant Biotechnology Journal. PMID 33073445 DOI: 10.1111/pbi.13493  0.389
2020 Zhang L, Wu S, Chang X, Wang X, Zhao Y, Xia Y, Trigiano RN, Jiao Y, Chen F. The ancient wave of polyploidization events in flowering plants and their facilitated adaptation to environmental stress. Plant, Cell & Environment. PMID 33001478 DOI: 10.1111/pce.13898  0.435
2020 Zheng X, He L, Liu Y, Mao Y, Wang C, Zhao B, Li Y, He H, Guo S, Zhang L, Schneider H, Tadege M, Chang F, Chen J. A study of male fertility control in Medicago truncatula uncovers an evolutionarily conserved recruitment of two tapetal bHLH subfamilies in plant sexual reproduction. The New Phytologist. PMID 32594537 DOI: 10.1111/nph.16770  0.313
2020 Zhang L, Liu M, Long H, Dong W, Pasha A, Esteban E, Li W, Yang X, Li Z, Song A, Ran D, Zhao G, Zeng Y, Chen H, Zou M, ... ... Zhang LS, et al. Tung Tree (Vernicia fordii) Genome Provides A Resource for Understanding Genome Evolution and Improved Oil Production. Genomics, Proteomics & Bioinformatics. PMID 32224189 DOI: 10.1016/j.gpb.2019.03.006  0.378
2020 Zhang L, Shen FM, Chen F, Lin Z. Origin and evolution of the 2019 novel coronavirus. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. PMID 32011673 DOI: 10.1093/Cid/Ciaa112  0.582
2019 Zhang L, Chen F, Zhang X, Li Z, Zhao Y, Lohaus R, Chang X, Dong W, Ho SYW, Liu X, Song A, Chen J, Guo W, Wang Z, Zhuang Y, et al. The water lily genome and the early evolution of flowering plants. Nature. PMID 31853069 DOI: 10.1038/S41586-019-1852-5  0.759
2019 Chen F, Song Y, Li X, Chen J, Mo L, Zhang X, Lin Z, Zhang L. Genome sequences of horticultural plants: past, present, and future. Horticulture Research. 6: 112. PMID 31645966 DOI: 10.1038/S41438-019-0195-6  0.704
2019 Chen F, Chen J, Wang Z, Zhang J, Li X, Lin M, Song Y, Zhang L. Genomics: cracking the mysteries of walnuts. Journal of Genetics. 98. PMID 31204723  0.415
2019 Zhuang W, Chen H, Yang M, Wang J, Pandey MK, Zhang C, Chang WC, Zhang L, Zhang X, Tang R, Garg V, Wang X, Tang H, Chow CN, Wang J, et al. The genome of cultivated peanut provides insight into legume karyotypes, polyploid evolution and crop domestication. Nature Genetics. PMID 31043757 DOI: 10.1038/S41588-019-0402-2  0.406
2019 Wu D, Luo J, Chen J, Zhang L, Lim KJ, Wang Z. Selection pressure causes differentiation of the SPL gene family in the Juglandaceae. Molecular Genetics and Genomics : Mgg. PMID 30976906 DOI: 10.1007/s00438-019-01562-y  0.377
2019 Shi Y, Su Z, Yang H, Wang W, Jin G, He G, Siddique AN, Zhang L, Zhu A, Xue R, Zhang C. Alternative splicing coupled to nonsense-mediated mRNA decay contributes to the high-altitude adaptation of maca (Lepidium meyenii). Gene. PMID 30716438 DOI: 10.1016/j.gene.2018.12.082  0.303
2018 Liu X, Sun Z, Dong W, Wang Z, Zhang L. Expansion and Functional Divergence of the SHORT VEGETATIVE PHASE (SVP) Genes in Eudicots. Genome Biology and Evolution. PMID 30364940 DOI: 10.1093/gbe/evy235  0.452
2018 Chen J, Zhang J, Lin M, Dong W, Guo X, Dong Y, Wang Z, Zhang L, Chen F. MGH: a genome hub for the medicinal plant maca (Lepidium meyenii). Database : the Journal of Biological Databases and Curation. 2018. PMID 30339215 DOI: 10.1093/database/bay113  0.352
2018 Dong S, Zhao C, Chen F, Liu Y, Zhang S, Wu H, Zhang L, Liu Y. The complete mitochondrial genome of the early flowering plant Nymphaea colorata is highly repetitive with low recombination. Bmc Genomics. 19: 614. PMID 30107780 DOI: 10.1186/s12864-018-4991-4  0.382
2018 Xu M, Chen F, Qi S, Zhang L, Wu S. Loss or duplication of key regulatory genes coincides with environmental adaptation of the stomatal complex in and . Horticulture Research. 5: 42. PMID 30083357 DOI: 10.1038/s41438-018-0048-8  0.424
2018 Klopfenstein DV, Zhang L, Pedersen BS, Ramírez F, Warwick Vesztrocy A, Naldi A, Mungall CJ, Yunes JM, Botvinnik O, Weigel M, Dampier W, Dessimoz C, Flick P, Tang H. GOATOOLS: A Python library for Gene Ontology analyses. Scientific Reports. 8: 10872. PMID 30022098 DOI: 10.1038/S41598-018-28948-Z  0.308
2018 Chen F, Zhang J, Chen J, Li X, Dong W, Hu J, Lin M, Liu Y, Li G, Wang Z, Zhang L. realDB: a genome and transcriptome resource for the red algae (phylum Rhodophyta). Database : the Journal of Biological Databases and Curation. 2018. PMID 30020436 DOI: 10.1093/database/bay072  0.381
2018 Dong W, Vannozzi A, Chen F, Hu Y, Chen Z, Zhang L. MORC domain definition and evolutionary analysis of the MORC gene family in green plants. Genome Biology and Evolution. PMID 29982569 DOI: 10.1093/gbe/evy136  0.404
2018 Chen F, Dong W, Zhang J, Guo X, Chen J, Wang Z, Lin Z, Tang H, Zhang L. The Sequenced Angiosperm Genomes and Genome Databases. Frontiers in Plant Science. 9: 418. PMID 29706973 DOI: 10.3389/Fpls.2018.00418  0.698
2018 Chen F, Zhang L, Lin Z, Cheng ZM. Identification of a novel fused gene family implicates convergent evolution in eukaryotic calcium signaling. Bmc Genomics. 19: 306. PMID 29703146 DOI: 10.1186/S12864-018-4685-Y  0.605
2018 Liang P, Saqib HSA, Zhang X, Zhang L, Tang H. Single-base resolution map of evolutionary constraints and annotation of conserved elements across major grass genomes. Genome Biology and Evolution. PMID 29378032 DOI: 10.1093/gbe/evy006  0.44
2017 Wuyun TN, Wang L, Liu H, Wang X, Zhang L, Bennetzen JL, Li T, Yang L, Liu P, Du L, Wang L, Huang M, Qing J, Zhu L, Bao W, et al. The hardy rubber tree genome provides insights into the evolution of polyisoprene biosynthesis. Molecular Plant. PMID 29229569 DOI: 10.1016/J.Molp.2017.11.014  0.408
2017 Fu X, Li J, Tian Y, Quan W, Zhang S, Liu Q, Liang F, Zhu X, Zhang L, Wang D, Hu J. Long-read sequence assembly of the firefly Pyrocoelia pectoralis genome. Gigascience. PMID 29186486 DOI: 10.1093/gigascience/gix112  0.365
2017 Chen F, Liu X, Yu C, Chen Y, Tang H, Zhang L. Water lilies as emerging models for Darwin's abominable mystery. Horticulture Research. 4: 17051. PMID 28979789 DOI: 10.1038/hortres.2017.51  0.353
2017 Chen F, Zhang L, Cheng ZM. The calmodulin fused kinase novel gene family is the major system in plants converting Ca(2+) signals to protein phosphorylation responses. Scientific Reports. 7: 4127. PMID 28646145 DOI: 10.1038/s41598-017-03367-8  0.33
2017 Chen F, Zhang X, Liu X, Zhang L. Evolutionary Analysis of MIKC(c)-Type MADS-Box Genes in Gymnosperms and Angiosperms. Frontiers in Plant Science. 8: 895. PMID 28611810 DOI: 10.3389/fpls.2017.00895  0.385
2017 Sun Z, Li Z, Huang J, Zheng B, Zhang L, Wang Z. Genome-wide comparative analysis of LEAFY promoter sequence in angiosperms. Physiology and Molecular Biology of Plants : An International Journal of Functional Plant Biology. 23: 23-33. PMID 28250581 DOI: 10.1007/s12298-016-0393-8  0.384
2016 Han Y, Li X, Cheng L, Liu Y, Wang H, Ke D, Yuan H, Zhang L, Wang L. Genome-Wide Analysis of Soybean JmjC Domain-Containing Proteins Suggests Evolutionary Conservation Following Whole-Genome Duplication. Frontiers in Plant Science. 7: 1800. PMID 27994610 DOI: 10.3389/fpls.2016.01800  0.424
2016 Zhang J, Tian Y, Yan L, Zhang G, Wang X, Zeng Y, Zhang J, Ma X, Tan Y, Long N, Wang Y, Ma Y, He Y, Xue Y, Hao S, ... ... Zhang L, et al. Genome of plant maca (Lepidium meyenii) illuminates genomic basis for high altitude adaptation in the central Andes. Molecular Plant. PMID 27174404 DOI: 10.1016/J.Molp.2016.04.016  0.48
2016 Zhong Z, Norvienyeku J, Chen M, Bao J, Lin L, Chen L, Lin Y, Wu X, Cai Z, Zhang Q, Lin X, Hong Y, Huang J, Xu L, Zhang H, ... ... Zhang L, et al. Directional Selection from Host Plants Is a Major Force Driving Host Specificity in Magnaporthe Species. Scientific Reports. 6: 25591. PMID 27151494 DOI: 10.1038/Srep25591  0.318
2016 Zhang L, Chen F, Zhang GQ, Zhang YQ, Niu S, Xiong JS, Lin Z, Cheng ZM, Liu ZJ. Origin and mechanism of crassulacean acid metabolism in orchids as implied by comparative transcriptomics and genomics of the carbon fixation pathway. The Plant Journal : For Cell and Molecular Biology. PMID 26959080 DOI: 10.1111/Tpj.13159  0.689
2016 Zhang GQ, Xu Q, Bian C, Tsai WC, Yeh CM, Liu KW, Yoshida K, Zhang LS, Chang SB, Chen F, Shi Y, Su YY, Zhang YQ, Chen LJ, Yin Y, et al. The Dendrobium catenatum Lindl. genome sequence provides insights into polysaccharide synthase, floral development and adaptive evolution. Scientific Reports. 6: 19029. PMID 26754549 DOI: 10.1038/srep19029  0.504
2015 Niu B, Wang L, Zhang L, Ren D, Ren R, Copenhaver GP, Ma H, Wang Y. Arabidopsis Cell Division Cycle 20.1 Is Required for Normal Meiotic Spindle Assembly and Chromosome Segregation. The Plant Cell. PMID 26672070 DOI: 10.1105/Tpc.15.00834  0.677
2015 Tang H, Bomhoff MD, Briones E, Zhang L, Schnable JC, Lyons E. SynFind: compiling syntenic regions across any set of genomes on demand. Genome Biology and Evolution. PMID 26560340 DOI: 10.1093/Gbe/Evv219  0.449
2015 Deng H, Zhang LS, Zhang GQ, Zheng BQ, Liu ZJ, Wang Y. Evolutionary history of PEPC genes in green plants: implications for the evolution of CAM in orchids. Molecular Phylogenetics and Evolution. PMID 26493226 DOI: 10.1016/j.ympev.2015.10.007  0.472
2015 Qian S, Wang Y, Ma H, Zhang L. Expansion and Functional Divergence of Jumonji C-Containing Histone Demethylases: Significance of Duplications in Ancestral Angiosperms and Vertebrates. Plant Physiology. 168: 1321-37. PMID 26059336 DOI: 10.1104/Pp.15.00520  0.702
2015 Li Q, Zhang N, Zhang L, Ma H. Differential evolution of members of the rhomboid gene family with conservative and divergent patterns. The New Phytologist. 206: 368-380. PMID 25417867 DOI: 10.1111/Nph.13174  0.61
2014 Zhang L, Wang L, Yang Y, Cui J, Chang F, Wang Y, Ma H. Analysis of Arabidopsis floral transcriptome: detection of new florally expressed genes and expansion of Brassicaceae-specific gene families. Frontiers in Plant Science. 5: 802. PMID 25653662 DOI: 10.3389/Fpls.2014.00802  0.71
2013 Chen F, Fasoli M, Tornielli GB, Dal Santo S, Pezzotti M, Zhang L, Cai B, Cheng ZM. The evolutionary history and diverse physiological roles of the grapevine calcium-dependent protein kinase gene family. Plos One. 8: e80818. PMID 24324631 DOI: 10.1371/Journal.Pone.0080818  0.381
2013 Dong X, Wang X, Zhang L, Yang Z, Xin X, Wu S, Sun C, Liu J, Yang J, Luo X. Identification and characterization of OsEBS, a gene involved in enhanced plant biomass and spikelet number in rice. Plant Biotechnology Journal. 11: 1044-57. PMID 23924074 DOI: 10.1111/Pbi.12097  0.348
2012 Zhang L, Ma H. Complex evolutionary history and diverse domain organization of SET proteins suggest divergent regulatory interactions. The New Phytologist. 195: 248-63. PMID 22510098 DOI: 10.1111/J.1469-8137.2012.04143.X  0.546
2012 Lei L, Zhou SL, Ma H, Zhang LS. Expansion and diversification of the SET domain gene family following whole-genome duplications in Populus trichocarpa. Bmc Evolutionary Biology. 12: 51. PMID 22497662 DOI: 10.1186/1471-2148-12-51  0.406
2009 Zhang LS, Ma CR, Ji Q, Wang YF. [Genome-wide identification, classification and expression analyses of SET domain gene family in Arabidopsis and rice]. Yi Chuan = Hereditas / Zhongguo Yi Chuan Xue Hui Bian Ji. 31: 186-98. PMID 19273428  0.372
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