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Taji Kawakatsu - Publications

Affiliations: 
2006- Institute of Agrobiological Sciences National Agriculture and Food Research Organization, Japan 
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23 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Numajiri Y, Yoshino K, Teramoto S, Hayashi A, Nishijima R, Tanaka T, Hayashi T, Kawakatsu T, Tanabata T, Uga Y. iPOTs: Internet of Things-based pot system controlling optional treatment of soil water condition for plant phenotyping under drought stress. The Plant Journal : For Cell and Molecular Biology. PMID 34197670 DOI: 10.1111/tpj.15400  0.708
2021 Kawakatsu T, Teramoto S, Takayasu S, Maruyama N, Nishijima R, Kitomi Y, Uga Y. The transcriptomic landscapes of rice cultivars with diverse root system architectures grown in upland field conditions. The Plant Journal : For Cell and Molecular Biology. 106: 1177-1190. PMID 33751672 DOI: 10.1111/tpj.15226  0.763
2021 Tonosaki K, Ono A, Kunisada M, Nishino M, Nagata H, Sakamoto S, Kijima ST, Furuumi H, Nonomura KI, Sato Y, Ohme-Takagi M, Endo M, Comai L, Hatakeyama K, Kawakatsu T, et al. Mutation of the imprinted gene OsEMF2a induces autonomous endosperm development and delayed cellularization in rice. The Plant Cell. 33: 85-103. PMID 33751094 DOI: 10.1093/plcell/koaa006  0.389
2020 Yoshino K, Nishijima R, Kawakatsu T. Low-cost RNA extraction method for highly scalable transcriptome studies. Breeding Science. 70: 481-486. PMID 32968351 DOI: JST.JSTAGE/jsbbs/19170  0.677
2020 Kawakatsu T. RNA-Directed DNA Methylation Links Viral Disease and Plant Architecture in Rice. Molecular Plant. 13: 814-816. PMID 32247768 DOI: 10.1016/j.molp.2020.03.013  0.43
2020 Tanaka T, Nishijima R, Teramoto S, Kitomi Y, Hayashi T, Uga Y, Kawakatsu T. Genome Assembly of the Rice Variety IR64 Using Linked-Read Sequencing and Nanopore Sequencing. G3 (Bethesda, Md.). 10: 1495-1501. PMID 32184372 DOI: 10.1534/g3.119.400871  0.726
2020 Kawakatsu T. Whole-Genome Bisulfite Sequencing and Epigenetic Variation in Cereal Methylomes. Methods in Molecular Biology (Clifton, N.J.). 2072: 119-128. PMID 31541442 DOI: 10.1007/978-1-4939-9865-4_10  0.455
2019 Sasaki E, Kawakatsu T, Ecker JR, Nordborg M. Common alleles of CMT2 and NRPE1 are major determinants of CHH methylation variation in Arabidopsis thaliana. Plos Genetics. 15: e1008492. PMID 31887137 DOI: 10.1371/Journal.Pgen.1008492  0.621
2019 Kawakatsu T, Ecker JR. Diversity and dynamics of DNA methylation: epigenomic resources and tools for crop breeding. Breeding Science. 69: 191-204. PMID 31481828 DOI: 10.1270/Jsbbs.19005  0.625
2018 Wakasa Y, Kawakatsu T, Harada T, Takaiwa F. Transgene-independent heredity of RdDM-mediated transcriptional gene silencing of endogenous genes in rice. Plant Biotechnology Journal. 16: 2007-2015. PMID 29704881 DOI: 10.1111/pbi.12934  0.445
2017 Kawakatsu T, Nery JR, Castanon R, Ecker JR. Dynamic DNA methylation reconfiguration during seed development and germination. Genome Biology. 18: 171. PMID 28911331 DOI: 10.1186/S13059-017-1251-X  0.611
2017 Takaiwa F, Wakasa Y, Hayashi S, Kawakatsu T. An overview on the strategies to exploit rice endosperm as production platform for biopharmaceuticals. Plant Science : An International Journal of Experimental Plant Biology. 263: 201-209. PMID 28818376 DOI: 10.1016/j.plantsci.2017.07.016  0.665
2017 Hossain MS, Kawakatsu T, Kim KD, Ning Z, Nguyen CT, Khan SM, Batek JM, Joshi T, Schmutz J, Grimwood J, Schmitz RJ, Xu D, Jackson SA, Ecker JR, Stacey G. Divergent cytosine DNA methylation patterns in single-cell, soybean root hairs. The New Phytologist. PMID 28106918 DOI: 10.1111/Nph.14421  0.754
2017 KAWAKATSU T. Natural Epigenomic Variations in Arabidopsis thaliana Kagaku to Seibutsu. 55: 810-816. DOI: 10.1271/KAGAKUTOSEIBUTSU.55.810  0.347
2016 Kawakatsu T, Huang SC, Jupe F, Sasaki E, Schmitz RJ, Urich MA, Castanon R, Nery JR, Barragan C, He Y, Chen H, Dubin M, Lee CR, Wang C, Bemm F, et al. Epigenomic Diversity in a Global Collection of Arabidopsis thaliana Accessions. Cell. 166: 492-505. PMID 27419873 DOI: 10.1016/J.Cell.2016.06.044  0.665
2016 Kawakatsu T, Stuart T, Valdes M, Breakfield N, Schmitz RJ, Nery JR, Urich MA, Han X, Lister R, Benfey PN, Ecker JR. Unique cell-type-specific patterns of DNA methylation in the root meristem. Nature Plants. 2: 16058. PMID 27243651 DOI: 10.1038/Nplants.2016.58  0.767
2013 Kawakatsu T, Kawahara Y, Itoh T, Takaiwa F. A whole-genome analysis of a transgenic rice seed-based edible vaccine against cedar pollen allergy. Dna Research : An International Journal For Rapid Publication of Reports On Genes and Genomes. 20: 623-31. PMID 23956243 DOI: 10.1093/dnares/dst036  0.404
2013 Hayashi S, Takahashi H, Wakasa Y, Kawakatsu T, Takaiwa F. Identification of a cis-element that mediates multiple pathways of the endoplasmic reticulum stress response in rice. The Plant Journal : For Cell and Molecular Biology. 74: 248-57. PMID 23331932 DOI: 10.1111/tpj.12117  0.709
2012 Pitakrattananukool S, Kawakatsu T, Anuntalabhochai S, Takaiwa F. Overexpression of OsRab7B3, a small GTP-binding protein gene, enhances leaf senescence in transgenic rice. Bioscience, Biotechnology, and Biochemistry. 76: 1296-302. PMID 22785493 DOI: 10.1271/bbb.120050  0.46
2012 Takahashi H, Kawakatsu T, Wakasa Y, Hayashi S, Takaiwa F. A rice transmembrane bZIP transcription factor, OsbZIP39, regulates the endoplasmic reticulum stress response. Plant & Cell Physiology. 53: 144-53. PMID 22084314 DOI: 10.1093/pcp/pcr157  0.71
2012 Hayashi S, Wakasa Y, Takahashi H, Kawakatsu T, Takaiwa F. Signal transduction by IRE1-mediated splicing of bZIP50 and other stress sensors in the endoplasmic reticulum stress response of rice. The Plant Journal : For Cell and Molecular Biology. 69: 946-56. PMID 22050533 DOI: 10.1111/j.1365-313X.2011.04844.x  0.715
2011 Wakasa Y, Yasuda H, Oono Y, Kawakatsu T, Hirose S, Takahashi H, Hayashi S, Yang L, Takaiwa F. Expression of ER quality control-related genes in response to changes in BiP1 levels in developing rice endosperm. The Plant Journal : For Cell and Molecular Biology. 65: 675-89. PMID 21223397 DOI: 10.1111/j.1365-313X.2010.04453.x  0.728
2010 Kawakatsu T, Takaiwa F. Differences in transcriptional regulatory mechanisms functioning for free lysine content and seed storage protein accumulation in rice grain. Plant & Cell Physiology. 51: 1964-74. PMID 21037241 DOI: 10.1093/pcp/pcq164  0.418
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