| Year |
Citation |
Score |
| 2025 |
Zhang X, Dagvadorj B, Gao J, Molloy LM, Crean LM, Williams SJ, Rathjen JP. Identification of a Key Gain-of-Function Residue for Effector Binding by In Vitro Shuffling of Barley Genes. Molecular Plant-Microbe Interactions : Mpmi. PMID 39903880 DOI: 10.1094/MPMI-11-24-0146-R |
0.436 |
|
| 2024 |
Chen J, Zhang X, Bernoux M, Rathjen JP, Dodds PN. Plant Toll/interleukin-1 receptor/resistance protein domains physically associate with enhanced disease susceptibility1 family proteins in immune signaling. Iscience. 27: 108817. PMID 38533452 DOI: 10.1016/j.isci.2024.108817 |
0.492 |
|
| 2023 |
Greenwood JR, Zhang X, Rathjen JP. Precision genome editing of crops for improved disease resistance. Current Biology : Cb. 33: R650-R657. PMID 37279695 DOI: 10.1016/j.cub.2023.04.058 |
0.355 |
|
| 2023 |
Sheikh AH, Zacharia I, Pardal AJ, Dominguez-Ferreras A, Sueldo DJ, Kim JG, Balmuth A, Gutierrez JR, Conlan BF, Ullah N, Nippe OM, Girija AM, Wu CH, Sessa G, Jones AME, ... ... Rathjen JP, et al. Dynamic changes of the Prf/Pto tomato resistance complex following effector recognition. Nature Communications. 14: 2568. PMID 37142566 DOI: 10.1038/s41467-023-38103-6 |
0.572 |
|
| 2022 |
Chen J, Zhang X, Rathjen JP, Dodds PN. Direct recognition of pathogen effectors by plant NLR immune receptors and downstream signalling. Essays in Biochemistry. PMID 35731245 DOI: 10.1042/EBC20210072 |
0.584 |
|
| 2020 |
Hu Y, Wilson S, Schwessinger B, Rathjen JP. Blurred lines: integrating emerging technologies to advance plant biosecurity. Current Opinion in Plant Biology. 56: 127-134. PMID 32610220 DOI: 10.1016/j.pbi.2020.04.011 |
0.329 |
|
| 2020 |
Wang J, Chen T, Han M, Qian L, Li J, Wu M, Han T, Cao J, Nagalakshmi U, Rathjen JP, Hong Y, Liu Y. Plant NLR immune receptor Tm-22 activation requires NB-ARC domain-mediated self-association of CC domain. Plos Pathogens. 16: e1008475. PMID 32339200 DOI: 10.1371/journal.ppat.1008475 |
0.387 |
|
| 2019 |
Horsefield S, Burdett H, Zhang X, Manik MK, Shi Y, Chen J, Qi T, Gilley J, Lai JS, Rank MX, Casey LW, Gu W, Ericsson DJ, Foley G, Hughes RO, ... ... Rathjen JP, et al. NAD cleavage activity by animal and plant TIR domains in cell death pathways. Science (New York, N.Y.). 365: 793-799. PMID 31439792 DOI: 10.1126/Science.Aax1911 |
0.405 |
|
| 2019 |
Hu Y, Green GS, Milgate AW, Stone EA, Rathjen JP, Schwessinger B. Pathogen Detection and Microbiome Analysis of Infected Wheat Using a Portable DNA Sequencer Phytobiomes Journal. 3: 92-101. DOI: 10.1094/PBIOMES-01-19-0004-R |
0.309 |
|
| 2018 |
Conlan B, Stoll T, Gorman JJ, Saur I, Rathjen JP. Development of a Rapid BioID System as a Probe for Plasma Membrane-Associated Immunity Proteins. Frontiers in Plant Science. 9: 1882. PMID 30619431 DOI: 10.3389/fpls.2018.01882 |
0.551 |
|
| 2018 |
Gimenez-Ibanez S, Hann DR, Chang JH, Segonzac C, Boller T, Rathjen JP. Differential Suppression of Innate Immune Responses by Transiently Expressed Type III Effectors. Frontiers in Plant Science. 9: 688. PMID 29875790 DOI: 10.3389/Fpls.2018.00688 |
0.78 |
|
| 2017 |
Rathjen JP, Dodds PN. Dancing with the Stars: An Asterid NLR Family. Trends in Plant Science. PMID 29029827 DOI: 10.1016/j.tplants.2017.09.018 |
0.346 |
|
| 2016 |
Thynne E, Saur IM, Simbaqueba J, Ogilvie HA, Gonzalez-Cendales Y, Mead O, Taranto A, Catanzariti AM, Mcdonald MC, Schwessinger B, Jones DA, Rathjen JP, Solomon PS. Fungal phytopathogens encode functional homologues of plant rapid alkalinisation factor (RALF) peptides. Molecular Plant Pathology. PMID 27291634 DOI: 10.1111/mpp.12444 |
0.317 |
|
| 2016 |
Saur IM, Kadota Y, Sklenar J, Holton NJ, Smakowska E, Belkhadir Y, Zipfel C, Rathjen JP. NbCSPR underlies age-dependent immune responses to bacterial cold shock protein in Nicotiana benthamiana. Proceedings of the National Academy of Sciences of the United States of America. 113: 3389-94. PMID 26944079 DOI: 10.1073/Pnas.1511847113 |
0.486 |
|
| 2015 |
Pfeilmeier S, Saur IM, Rathjen JP, Zipfel C, Malone JG. High levels of cyclic-di-GMP in plant-associated Pseudomonas correlate with evasion of plant immunity. Molecular Plant Pathology. PMID 26202381 DOI: 10.1111/mpp.12297 |
0.597 |
|
| 2015 |
Schwessinger B, Rathjen JP. Changing SERKs and priorities during plant life. Trends in Plant Science. 20: 531-3. PMID 26124000 DOI: 10.1016/j.tplants.2015.06.006 |
0.489 |
|
| 2014 |
Monaghan J, Matschi S, Shorinola O, Rovenich H, Matei A, Segonzac C, Malinovsky FG, Rathjen JP, Maclean D, Romeis T, Zipfel C. The calcium-dependent protein kinase CPK28 buffers plant immunity and regulates BIK1 turnover Cell Host and Microbe. 16: 605-615. PMID 25525792 DOI: 10.1016/j.chom.2014.10.007 |
0.551 |
|
| 2014 |
Ntoukakis V, Saur IM, Conlan B, Rathjen JP. The changing of the guard: the Pto/Prf receptor complex of tomato and pathogen recognition. Current Opinion in Plant Biology. 20: 69-74. PMID 24845576 DOI: 10.1016/j.pbi.2014.04.002 |
0.517 |
|
| 2014 |
Garnica DP, Rathjen JP. Purification of fungal haustoria from infected plant tissue by flow cytometry. Methods in Molecular Biology (Clifton, N.J.). 1127: 103-10. PMID 24643555 DOI: 10.1007/978-1-62703-986-4_8 |
0.373 |
|
| 2014 |
Piquerez SJ, Balmuth AL, Sklenář J, Jones AM, Rathjen JP, Ntoukakis V. Identification of post-translational modifications of plant protein complexes. Journal of Visualized Experiments : Jove. e51095. PMID 24637539 DOI: 10.3791/51095 |
0.405 |
|
| 2014 |
Gimenez-Ibanez S, Boter M, Fernández-Barbero G, Chini A, Rathjen JP, Solano R. The bacterial effector HopX1 targets JAZ transcriptional repressors to activate jasmonate signaling and promote infection in Arabidopsis. Plos Biology. 12: e1001792. PMID 24558350 DOI: 10.1371/Journal.Pbio.1001792 |
0.772 |
|
| 2014 |
Hann DR, Domínguez-Ferreras A, Motyka V, Dobrev PI, Schornack S, Jehle A, Felix G, Chinchilla D, Rathjen JP, Boller T. The Pseudomonas type III effector HopQ1 activates cytokinin signaling and interferes with plant innate immunity. The New Phytologist. 201: 585-98. PMID 24124900 DOI: 10.1111/Nph.12544 |
0.438 |
|
| 2013 |
Garnica DP, Upadhyaya NM, Dodds PN, Rathjen JP. Strategies for Wheat Stripe Rust Pathogenicity Identified by Transcriptome Sequencing. Plos One. 8: e67150. PMID 23840606 DOI: 10.1371/journal.pone.0067150 |
0.361 |
|
| 2013 |
Ntoukakis V, Balmuth AL, Mucyn TS, Gutierrez JR, Jones AM, Rathjen JP. The tomato Prf complex is a molecular trap for bacterial effectors based on Pto transphosphorylation. Plos Pathogens. 9: e1003123. PMID 23382672 DOI: 10.1371/journal.ppat.1003123 |
0.508 |
|
| 2012 |
Macho AP, Boutrot F, Rathjen JP, Zipfel C. Aspartate oxidase plays an important role in Arabidopsis stomatal immunity. Plant Physiology. 159: 1845-56. PMID 22730426 DOI: 10.1104/pp.112.199810 |
0.421 |
|
| 2012 |
Albrecht C, Boutrot F, Segonzac C, Schwessinger B, Gimenez-Ibanez S, Chinchilla D, Rathjen JP, de Vries SC, Zipfel C. Brassinosteroids inhibit pathogen-associated molecular pattern-triggered immune signaling independent of the receptor kinase BAK1. Proceedings of the National Academy of Sciences of the United States of America. 109: 303-8. PMID 22087006 DOI: 10.1073/pnas.1109921108 |
0.781 |
|
| 2011 |
Segonzac C, Feike D, Gimenez-Ibanez S, Hann DR, Zipfel C, Rathjen JP. Hierarchy and roles of pathogen-associated molecular pattern-induced responses in Nicotiana benthamiana. Plant Physiology. 156: 687-99. PMID 21478366 DOI: 10.1104/pp.110.171249 |
0.759 |
|
| 2011 |
Chaparro-Garcia A, Wilkinson RC, Gimenez-Ibanez S, Findlay K, Coffey MD, Zipfel C, Rathjen JP, Kamoun S, Schornack S. The receptor-like kinase SERK3/BAK1 is required for basal resistance against the late blight pathogen phytophthora infestans in Nicotiana benthamiana. Plos One. 6: e16608. PMID 21304602 DOI: 10.1371/Journal.Pone.0016608 |
0.758 |
|
| 2010 |
Boutrot F, Segonzac C, Chang KN, Qiao H, Ecker JR, Zipfel C, Rathjen JP. Direct transcriptional control of the Arabidopsis immune receptor FLS2 by the ethylene-dependent transcription factors EIN3 and EIL1 Proceedings of the National Academy of Sciences of the United States of America. 107: 14502-14507. PMID 20663954 DOI: 10.1073/Pnas.1003347107 |
0.58 |
|
| 2010 |
Dodds PN, Rathjen JP. Plant immunity: towards an integrated view of plant-pathogen interactions. Nature Reviews. Genetics. 11: 539-48. PMID 20585331 DOI: 10.1038/nrg2812 |
0.551 |
|
| 2010 |
Hann DR, Rathjen JP. The long and winding road: virulence effector proteins of plant pathogenic bacteria. Cellular and Molecular Life Sciences : Cmls. 67: 3425-34. PMID 20549537 DOI: 10.1007/s00018-010-0428-1 |
0.614 |
|
| 2010 |
Hann DR, Gimenez-Ibanez S, Rathjen JP. Bacterial virulence effectors and their activities. Current Opinion in Plant Biology. 13: 388-93. PMID 20466583 DOI: 10.1016/j.pbi.2010.04.003 |
0.773 |
|
| 2010 |
Gimenez-Ibanez S, Rathjen JP. The case for the defense: plants versus Pseudomonas syringae. Microbes and Infection. 12: 428-37. PMID 20214999 DOI: 10.1016/j.micinf.2010.03.002 |
0.777 |
|
| 2010 |
Gutierrez JR, Balmuth AL, Ntoukakis V, Mucyn TS, Gimenez-Ibanez S, Jones AM, Rathjen JP. Prf immune complexes of tomato are oligomeric and contain multiple Pto-like kinases that diversify effector recognition. The Plant Journal : For Cell and Molecular Biology. 61: 507-18. PMID 19919571 DOI: 10.1111/j.1365-313X.2009.04078.x |
0.738 |
|
| 2010 |
Solomon P, Rathjen JP. Pathogen effectors shed light on plant diseases Functional Plant Biology. 37: iii. DOI: 10.1071/FPV37N10_FO |
0.371 |
|
| 2010 |
Gimenez-Ibanez S, Hann DR, Rathjen JP. Deciphering the mode of action and host recognition of bacterial type III effectors Functional Plant Biology. 37: 926. DOI: 10.1071/FP10085 |
0.795 |
|
| 2009 |
Gimenez-Ibanez S, Ntoukakis V, Rathjen JP. The LysM receptor kinase CERK1 mediates bacterial perception in Arabidopsis. Plant Signaling & Behavior. 4: 539-41. PMID 19816132 DOI: 10.4161/psb.4.6.8697 |
0.701 |
|
| 2009 |
Studholme DJ, Ibanez SG, MacLean D, Dangl JL, Chang JH, Rathjen JP. A draft genome sequence and functional screen reveals the repertoire of type III secreted proteins of Pseudomonas syringae pathovar tabaci 11528 Bmc Genomics. 10: 395. PMID 19703286 DOI: 10.1186/1471-2164-10-395 |
0.305 |
|
| 2009 |
Ntoukakis V, Mucyn TS, Gimenez-Ibanez S, Chapman HC, Gutierrez JR, Balmuth AL, Jones AM, Rathjen JP. Host inhibition of a bacterial virulence effector triggers immunity to infection. Science (New York, N.Y.). 324: 784-7. PMID 19423826 DOI: 10.1126/science.1169430 |
0.785 |
|
| 2009 |
Mucyn TS, Wu AJ, Balmuth AL, Arasteh JM, Rathjen JP. Regulation of tomato Prf by Pto-like protein kinases Molecular Plant-Microbe Interactions. 22: 391-401. PMID 19271954 DOI: 10.1094/MPMI-22-4-0391 |
0.403 |
|
| 2009 |
Gimenez-Ibanez S, Hann DR, Ntoukakis V, Petutschnig E, Lipka V, Rathjen JP. AvrPtoB targets the LysM receptor kinase CERK1 to promote bacterial virulence on plants. Current Biology : Cb. 19: 423-9. PMID 19249211 DOI: 10.1016/j.cub.2009.01.054 |
0.818 |
|
| 2009 |
Kaffarnik FA, Jones AM, Rathjen JP, Peck SC. Effector proteins of the bacterial pathogen Pseudomonas syringae alter the extracellular proteome of the host plant, Arabidopsis thaliana. Molecular & Cellular Proteomics : McP. 8: 145-56. PMID 18716313 DOI: 10.1074/mcp.M800043-MCP200 |
0.465 |
|
| 2008 |
Zipfel C, Rathjen JP. Plant immunity: AvrPto targets the frontline. Current Biology : Cb. 18: R218-20. PMID 18334200 DOI: 10.1016/j.cub.2008.01.016 |
0.62 |
|
| 2007 |
Balmuth A, Rathjen JP. Genetic and molecular requirements for function of the Pto/Prf effector recognition complex in tomato and Nicotiana benthamiana. The Plant Journal : For Cell and Molecular Biology. 51: 978-90. PMID 17635766 DOI: 10.1111/j.1365-313X.2007.03199.x |
0.334 |
|
| 2007 |
Heese A, Hann DR, Gimenez-Ibanez S, Jones AM, He K, Li J, Schroeder JI, Peck SC, Rathjen JP. The receptor-like kinase SERK3/BAK1 is a central regulator of innate immunity in plants. Proceedings of the National Academy of Sciences of the United States of America. 104: 12217-22. PMID 17626179 DOI: 10.1073/Pnas.0705306104 |
0.784 |
|
| 2007 |
Hann DR, Rathjen JP. Early events in the pathogenicity of Pseudomonas syringae on Nicotiana benthamiana. The Plant Journal : For Cell and Molecular Biology. 49: 607-18. PMID 17217460 DOI: 10.1111/j.1365-313X.2006.02981.x |
0.545 |
|
| 2006 |
Mucyn TS, Clemente A, Andriotis VM, Balmuth AL, Oldroyd GE, Staskawicz BJ, Rathjen JP. The tomato NBARC-LRR protein Prf interacts with Pto kinase in vivo to regulate specific plant immunity. The Plant Cell. 18: 2792-806. PMID 17028203 DOI: 10.1105/Tpc.106.044016 |
0.507 |
|
| 2006 |
Andriotis VM, Rathjen JP. The Pto kinase of tomato, which regulates plant immunity, is repressed by its myristoylated N terminus. The Journal of Biological Chemistry. 281: 26578-86. PMID 16785235 DOI: 10.1074/jbc.M603197200 |
0.328 |
|
| 2004 |
Wu AJ, Andriotis VME, Durrant MC, Rathjen JP. A patch of surface-exposed residues mediates negative regulation of immune signaling by tomato Pto kinase Plant Cell. 16: 2809-2821. PMID 15367718 DOI: 10.1105/tpc.104.024141 |
0.368 |
|
| 2003 |
Rathjen JP, Moffett P. Early signal transduction events in specific plant disease resistance. Current Opinion in Plant Biology. 6: 300-6. PMID 12873522 DOI: 10.1016/s1369-5266(03)00057-8 |
0.439 |
|
| 1999 |
Rathjen JP, Chang JH, Staskawicz BJ, Michelmore RW. Constitutively active Pto induces a Prf-dependent hypersensitive response in the absence of avrPto Embo Journal. 18: 3232-3240. PMID 10369664 DOI: 10.1093/Emboj/18.12.3232 |
0.379 |
|
| 1997 |
Ramirez E, Hernádez A, Ham E, Barrón BL, Ding SW, Li WX, Shi BJ, Symons RH, Li Q, Ryu KH, Palukaitis P, Kaplan IB, Palukaitis P, Kaplan IB, Palukaitis P, ... ... Rathjen J, et al. Abstracts of presentations on plant protection issues at the xth international congress of virology Phytoparasitica. 25: 217-238. DOI: 10.1007/Bf02981735 |
0.301 |
|
| 1996 |
Scofield SR, Tobias CM, Rathjen JP, Chang JH, Lavelle DT, Michelmore RW, Staskawicz BJ. Molecular basis of gene-for-gene specificity in bacterial speck disease of tomato Science. 274: 2063-2065. DOI: 10.1126/Science.274.5295.2063 |
0.406 |
|
| Low-probability matches (unlikely to be authored by this person) |
| 2017 |
Roman-Reyna V, Rathjen JP. Apoplastic Sugar Extraction and Quantification from Wheat Leaves Infected with Biotrophic Fungi. Methods in Molecular Biology (Clifton, N.J.). 1659: 125-134. PMID 28856646 DOI: 10.1007/978-1-4939-7249-4_11 |
0.298 |
|
| 2015 |
Saur IM, Conlan BF, Rathjen JP. The N-terminal domain of the tomato immune protein Prf contains multiple homotypic and Pto kinase interaction sites. The Journal of Biological Chemistry. 290: 11258-67. PMID 25792750 DOI: 10.1074/jbc.M114.616532 |
0.272 |
|
| 2000 |
Chang JH, Rathjen JP, Bernal AJ, Staskawicz BJ, Michelmore RW. avrPto enhances growth and necrosis caused by Pseudomonas syringae pv. tomato in Tomato lines lacking either Pto or Prf Molecular Plant-Microbe Interactions. 13: 568-571. PMID 10796023 DOI: 10.1094/Mpmi.2000.13.5.568 |
0.268 |
|
| 2006 |
De Vries JS, Andriotis VME, Wu AJ, Rathjen JP. Tomato Pto encodes a functional N-myristoylation motif that is required for signal transduction in Nicotiana benthamiana Plant Journal. 45: 31-45. PMID 16367952 DOI: 10.1111/j.1365-313X.2005.02590.x |
0.266 |
|
| 2022 |
Greenwood JR, Rathjen JP. Plant pathology: Precision genome engineering keeps wheat disease at bay. Current Biology : Cb. 32: R382-R384. PMID 35472431 DOI: 10.1016/j.cub.2022.03.044 |
0.258 |
|
| 2021 |
Lee HC, Binos S, Chapman K, Pulsford SB, Ivanovici A, Rathjen JP, Djordjevic MA. A new method to visualize CEP peptide-CEP receptor interactions in vascular tissue in vivo. Journal of Experimental Botany. PMID 34059899 DOI: 10.1093/jxb/erab244 |
0.256 |
|
| 2024 |
Wilson S, Dagvadorj B, Tam R, Murphy L, Schulz-Kroenert S, Heng N, Crean E, Greenwood J, Rathjen JP, Schwessinger B. Multiplexed effector screening for recognition by endogenous resistance genes using positive defense reporters in wheat protoplasts. The New Phytologist. PMID 38282212 DOI: 10.1111/nph.19555 |
0.255 |
|
| 2025 |
Wess J, Hu Y, Periyannan S, Jones A, Rathjen JP. Global transcriptome changes during growth of a novel Penicillium coffeae isolate on the wheat stripe rust fungus, Puccinia striiformis f. sp. tritici. Fungal Genetics and Biology : Fg & B. 176: 103956. PMID 39828139 DOI: 10.1016/j.fgb.2024.103956 |
0.244 |
|
| 2017 |
Pornsiriwong W, Estavillo GM, Chan KX, Tee EE, Ganguly D, Crisp PA, Phua SY, Zhao C, Qiu J, Park J, Yong MT, Nisar N, Yadav AK, Schwessinger B, Rathjen J, et al. A chloroplast retrograde signal, 3'-phosphoadenosine 5'-phosphate, acts as a secondary messenger in abscisic acid signaling in stomatal closure and germination. Elife. 6. PMID 28323614 DOI: 10.7554/Elife.23361 |
0.244 |
|
| 2003 |
Lu R, Malcuit I, Moffett P, Ruiz MT, Peart J, Wu AJ, Rathjen JP, Bendahmane A, Day L, Baulcombe DC. High throughput virus-induced gene silencing implicates heat shock protein 90 in plant disease resistance. The Embo Journal. 22: 5690-9. PMID 14592968 DOI: 10.1093/Emboj/Cdg546 |
0.243 |
|
| 2013 |
Burlinson P, Studholme D, Cambray-Young J, Heavens D, Rathjen J, Hodgkin J, Preston GM. Pseudomonas fluorescens NZI7 repels grazing by C. elegans, a natural predator. The Isme Journal. 7: 1126-38. PMID 23426012 DOI: 10.1038/ismej.2013.9 |
0.237 |
|
| 2009 |
Jones AM, MacLean D, Studholme DJ, Serna-Sanz A, Andreasson E, Rathjen JP, Peck SC. Phosphoproteomic analysis of nuclei-enriched fractions from Arabidopsis thaliana. Journal of Proteomics. 72: 439-51. PMID 19245862 DOI: 10.1016/j.jprot.2009.02.004 |
0.228 |
|
| 2018 |
Schwessinger B, Sperschneider J, Cuddy WS, Garnica DP, Miller ME, Taylor JM, Dodds PN, Figueroa M, Park RF, Rathjen JP. A Near-Complete Haplotype-Phased Genome of the Dikaryotic Wheat Stripe Rust Fungusf. sp.Reveals High Interhaplotype Diversity. Mbio. 9. PMID 29463659 DOI: 10.1128/mBio.02275-17 |
0.179 |
|
| 2014 |
Upadhyaya NM, Garnica DP, Karaoglu H, Sperschneider J, Nemri A, Xu B, Mago R, Cuomo CA, Rathjen JP, Park RF, Ellis JG, Dodds PN. Comparative genomics of Australian isolates of the wheat stem rust pathogen Puccinia graminis f. sp. tritici reveals extensive polymorphism in candidate effector genes. Frontiers in Plant Science. 5: 759. PMID 25620970 DOI: 10.3389/fpls.2014.00759 |
0.157 |
|
| 2008 |
Whiteman SA, Serazetdinova L, Jones AM, Sanders D, Rathjen J, Peck SC, Maathuis FJ. Identification of novel proteins and phosphorylation sites in a tonoplast enriched membrane fraction of Arabidopsis thaliana. Proteomics. 8: 3536-47. PMID 18686298 DOI: 10.1002/pmic.200701104 |
0.154 |
|
| 2018 |
Miller ME, Zhang Y, Omidvar V, Sperschneider J, Schwessinger B, Raley C, Palmer JM, Garnica D, Upadhyaya N, Rathjen J, Taylor JM, Park RF, Dodds PN, Hirsch CD, Kianian SF, et al.
Assembly and Phasing of Dikaryotic Genomes from Two Isolates off. sp., the Causal Agent of Oat Crown Rust. Mbio. 9. PMID 29463655 DOI: 10.1128/Mbio.01650-17 |
0.152 |
|
| 2022 |
Duan H, Jones AW, Hewitt T, Mackenzie A, Hu Y, Sharp A, Lewis D, Mago R, Upadhyaya NM, Rathjen JP, Stone EA, Schwessinger B, Figueroa M, Dodds PN, Periyannan S, et al. Physical separation of haplotypes in dikaryons allows benchmarking of phasing accuracy in Nanopore and HiFi assemblies with Hi-C data. Genome Biology. 23: 84. PMID 35337367 DOI: 10.1186/s13059-022-02658-2 |
0.139 |
|
| 2017 |
Schwessinger B, Rathjen JP. Extraction of High Molecular Weight DNA from Fungal Rust Spores for Long Read Sequencing. Methods in Molecular Biology (Clifton, N.J.). 1659: 49-57. PMID 28856640 DOI: 10.1007/978-1-4939-7249-4_5 |
0.137 |
|
| 1998 |
Ford CM, Paltridge NG, Rathjen JP, Moritz RL, Simpson RJ, Symons RH. Rapid and informative assays for Yd2, the barley yellow dwarf virus resistance gene, based on the nucleotide sequence of a closely linked gene Molecular Breeding. 4: 23-31. DOI: 10.1023/A:1009686932457 |
0.134 |
|
| 1995 |
Ding SW, Rathjen JP, Li WX, Swanson R, Healy H, Symons RH. Efficient infection from cDNA clones of cucumber mosaic cucumovirus RNAs in a new plasmid vector. The Journal of General Virology. 76: 459-64. PMID 7844568 DOI: 10.1099/0022-1317-76-2-459 |
0.131 |
|
| 2009 |
Studholme DJ, Ibanez S, MacLean D, Dangl JL, Chang JH, Rathjen JP. A draft genome sequence and functional screen reveals the repertoire of type III secreted proteins of Pseudomonas syringae pathovar tabaci 11528 Bmc Genomics. 10: 569. DOI: 10.1186/1471-2164-10-569 |
0.124 |
|
| 2018 |
Schalamun M, Nagar R, Kainer D, Beavan E, Eccles D, Rathjen JP, Lanfear R, Schwessinger B. Harnessing the MinION: An example of how to establish long-read sequencing in a laboratory using challenging plant tissue from Eucalyptus pauciflora. Molecular Ecology Resources. PMID 30118581 DOI: 10.1111/1755-0998.12938 |
0.122 |
|
| 2020 |
Schwessinger B, Chen YJ, Tien R, Vogt JK, Sperschneider J, Nagar R, McMullan M, Sicheritz-Ponten T, Sørensen CK, Hovmøller MS, Rathjen JP, Justesen AF. Distinct life histories impact dikaryotic genome evolution in the rust fungus Puccinia striiformis causing stripe rust in wheat. Genome Biology and Evolution. PMID 32271913 DOI: 10.1093/gbe/evaa071 |
0.117 |
|
| 2022 |
Hu Y, Irinyi L, Hoang MTV, Eenjes T, Graetz A, Stone EA, Meyer W, Schwessinger B, Rathjen JP. Inferring Species Compositions of Complex Fungal Communities from Long- and Short-Read Sequence Data. Mbio. 13: e0244421. PMID 35404122 DOI: 10.1128/mbio.02444-21 |
0.093 |
|
| 2019 |
Irinyi L, Hu Y, Hoang MTV, Pasic L, Halliday C, Jayawardena M, Basu I, McKinney W, Morris AJ, Rathjen J, Stone E, Chen S, Sorrell TC, Schwessinger B, Meyer W. Long-read sequencing based clinical metagenomics for the detection and confirmation of Pneumocystis jirovecii directly from clinical specimens: A paradigm shift in mycological diagnostics. Medical Mycology. PMID 31758176 DOI: 10.1093/mmy/myz109 |
0.09 |
|
| 2011 |
Csukasi F, Osorio S, Gutierrez JR, Kitamura J, Giavalisco P, Nakajima M, Fernie AR, Rathjen JP, Botella MA, Valpuesta V, Medina-Escobar N. Gibberellin biosynthesis and signalling during development of the strawberry receptacle. The New Phytologist. 191: 376-90. PMID 21443649 DOI: 10.1111/j.1469-8137.2011.03700.x |
0.081 |
|
| 2014 |
Garnica DP, Nemri A, Upadhyaya NM, Rathjen JP, Dodds PN. The ins and outs of rust haustoria. Plos Pathogens. 10: e1004329. PMID 25211126 DOI: 10.1371/journal.ppat.1004329 |
0.073 |
|
| 1994 |
Rathjen JP, Karageorgos LE, Habili N, Waterhouse PM, Symons RH. Soybean dwarf luteovirus contains the third variant genome type in the luteovirus group. Virology. 198: 671-9. PMID 8291248 DOI: 10.1006/Viro.1994.1079 |
0.056 |
|
| 2019 |
Kalin R, Mwanamveka J, Coulson A, Robertson D, Clark H, Rathjen J, Rivett M. Stranded Assets as a Key Concept to Guide Investment Strategies for Sustainable Development Goal 6 Water. 11: 702. DOI: 10.3390/W11040702 |
0.03 |
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| 2022 |
Schwessinger B, Jones A, Albekaa M, Hu Y, Mackenzie A, Tam R, Nagar R, Milgate A, Rathjen JP, Periyannan S. A Chromosome Scale Assembly of an Australian f. sp. Isolate of the Lineage. Molecular Plant-Microbe Interactions : Mpmi. MPMI09210236A. PMID 35167331 DOI: 10.1094/MPMI-09-21-0236-A |
0.02 |
|
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