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Kathy Fange Liu, Ph.D. - Publications

Affiliations: 
2008-2013 Department of Chemistry Georgia State University, Atlanta, GA, United States 
 2013-2017 Department of Chemistry University of Chicago, Chicago, IL 
 2018- Department of Biochemistry and Biophysics University of Pennsylvania, Philadelphia, PA, United States 
Area:
RNA enzymology, Sex-specific RNA biology, Protein structure-function
Website:
https://www.med.upenn.edu/kathyliulab/
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19 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Yanas A, Shweta H, Owens MC, Liu KF, Goldman YE. DDX3X and DDX3Y constitutively form nano-sized RNA-protein clusters that foster enzymatic activity. Biorxiv : the Preprint Server For Biology. PMID 38077005 DOI: 10.1101/2023.11.29.569239  0.801
2023 Owens MC, Shen H, Yanas A, Mendoza-Figueroa MS, Lavorando E, Wei X, Shweta H, Tang HY, Goldman YE, Liu KF. Mutant forms of DDX3X with diminished catalysis form hollow condensates that exhibit sex-specific regulation. Biorxiv : the Preprint Server For Biology. PMID 38076929 DOI: 10.1101/2023.03.19.533240  0.789
2023 Maldonado López AM, Ko EK, Huang S, Pacella G, Kuprasertkul N, D'souza CA, Reyes Hueros RA, Shen H, Stoute J, Elashal H, Sinkfield M, Anderson A, Prouty S, Li HB, Seykora JT, ... Liu KF, et al. Mettl3-catalyzed mA regulates histone modifier and modification expression in self-renewing somatic tissue. Science Advances. 9: eadg5234. PMID 37656787 DOI: 10.1126/sciadv.adg5234  0.748
2023 Chen AY, Owens MC, Liu KF. Coordination of RNA modifications in the brain and beyond. Molecular Psychiatry. PMID 37138184 DOI: 10.1038/s41380-023-02083-2  0.707
2023 Gonskikh Y, Stoute J, Shen H, Budinich K, Pingul B, Schultz K, Elashal H, Marmorstein R, Shi J, Liu KF. Noncatalytic regulation of 18 rRNA methyltransferase DIMT1 in acute myeloid leukemia. Genes & Development. PMID 37024283 DOI: 10.1101/gad.350298.122  0.697
2022 Owens MC, Liu KF. TRIBE-STAMP reveals new insights into the functions of RNA binding proteins. Genes & Development. 36: 954-955. PMID 36347558 DOI: 10.1101/gad.350207.122  0.668
2022 Basavappa MG, Ferretti M, Dittmar M, Stoute J, Sullivan MC, Whig K, Shen H, Liu KF, Schultz DC, Beiting DP, Lynch KW, Henao-Mejia J, Cherry S. The lncRNA ALPHA specifically targets chikungunya virus to control infection. Molecular Cell. PMID 36167073 DOI: 10.1016/j.molcel.2022.08.030  0.781
2022 Perlegos AE, Shields EJ, Shen H, Liu KF, Bonini NM. Mettl3-dependent mA modification attenuates the brain stress response in Drosophila. Nature Communications. 13: 5387. PMID 36104353 DOI: 10.1038/s41467-022-33085-3  0.321
2022 Santoleri D, Lim HW, Emmett MJ, Stoute J, Gavin MJ, Sostre-Colón J, Uehara K, Welles JE, Liu KF, Lazar MA, Titchenell PM. Global-run on sequencing identifies as an Akt-dependent long noncoding RNA involved in insulin sensitivity. Iscience. 25: 104410. PMID 35663017 DOI: 10.1016/j.isci.2022.104410  0.778
2022 Shen H, Yanas A, Owens MC, Zhang C, Fritsch C, Fare CM, Copley KE, Shorter J, Goldman YE, Liu KF. Sexually dimorphic RNA helicases DDX3X and DDX3Y differentially regulate RNA metabolism through phase separation. Molecular Cell. PMID 35588748 DOI: 10.1016/j.molcel.2022.04.022  0.781
2021 Stoute J, Liu KF. CLIP-Seq to identify targets and interactions of RNA binding proteins and RNA modifying enzymes. Methods in Enzymology. 658: 419-434. PMID 34517957 DOI: 10.1016/bs.mie.2021.08.001  0.835
2021 Owens MC, Zhang C, Liu KF. Recent technical advances in the study of nucleic acid modifications. Molecular Cell. PMID 34480848 DOI: 10.1016/j.molcel.2021.07.036  0.516
2021 Shen H, Gonskikh Y, Stoute J, Liu KF. Human DIMT1 generates NA-dimethylation-containing small RNAs. The Journal of Biological Chemistry. 101146. PMID 34473991 DOI: 10.1016/j.jbc.2021.101146  0.793
2020 Shen H, Ontiveros RJ, Owens MC, Liu MY, Ghanty U, Kohli RM, Liu KF. TET-mediated 5-methylcytosine oxidation in tRNA promotes translation. The Journal of Biological Chemistry. PMID 33199375 DOI: 10.1074/jbc.RA120.014226  0.766
2020 Wang Y, Liu KF, Yang Y, Davis I, Liu A. Observing 3-hydroxyanthranilate-3,4-dioxygenase in action through a crystalline lens. Proceedings of the National Academy of Sciences of the United States of America. PMID 32732435 DOI: 10.1073/Pnas.2005327117  0.624
2020 Shen H, Stoute J, Liu KF. Structural and catalytic roles of the human 18S rRNA methyltransferases DIMT1 in ribosome assembly and translation. The Journal of Biological Chemistry. PMID 32616653 DOI: 10.1074/jbc.RA120.014236  0.785
2020 Ontiveros RJ, Shen H, Stoute J, Yanas A, Cui Y, Zhang Y, Liu KF. Coordination of mRNA and tRNA methylations by TRMT10A. Proceedings of the National Academy of Sciences of the United States of America. PMID 32213595 DOI: 10.1073/pnas.1913448117  0.759
2019 Yanas A, Liu KF. RNA modifications and the link to human disease. Methods in Enzymology. 626: 133-146. PMID 31606073 DOI: 10.1016/bs.mie.2019.08.003  0.818
2019 Ontiveros RJ, Stoute J, Liu KF. The chemical diversity of RNA modifications. The Biochemical Journal. 476: 1227-1245. PMID 31028151 DOI: 10.1042/BCJ20180445  0.838
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