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Fredy Barneche - Publications

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34 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Vidal A, Concia L, Rougée M, Bourbousse C, Barneche F. ChIP-Rx: Arabidopsis Chromatin Profiling Using Quantitative ChIP-Seq. Methods in Molecular Biology (Clifton, N.J.). 2873: 71-92. PMID 39576597 DOI: 10.1007/978-1-0716-4228-3_5  0.788
2024 Amiard S, Feit L, Vanrobays E, Simon L, Le Goff S, Loizeau L, Wolff L, Butter F, Bourbousse C, Barneche F, Tatout C, Probst AV. The TELOMERE REPEAT BINDING proteins TRB4 and TRB5 function as transcriptional activators of PRC2-controlled genes to regulate plant development. Plant Communications. 100890. PMID 38566416 DOI: 10.1016/j.xplc.2024.100890  0.823
2024 Blanco-Touriñán N, Pérez-Alemany J, Bourbousse C, Latrasse D, Ait-Mohamed O, Benhamed M, Barneche F, Blázquez MA, Gallego-Bartolomé J, Alabadí D. The plant POLYMERASE ASSOCIATED FACTOR1 complex links transcription and H2B monoubiquitination genome-wide. Plant Physiology. PMID 38285074 DOI: 10.1093/plphys/kiae041  0.821
2024 Godwin J, Govindasamy M, Nedounsejian K, March E, Halton R, Bourbousse C, Wolff L, Fort A, Krzyszton M, López Corrales J, Swiezewski S, Barneche F, Schubert D, Farrona S. The UBP5 histone H2A deubiquitinase counteracts PRCs-mediated repression to regulate Arabidopsis development. Nature Communications. 15: 667. PMID 38253560 DOI: 10.1038/s41467-023-44546-8  0.838
2023 Teano G, Concia L, Wolff L, Carron L, Biocanin I, Adamusová K, Fojtová M, Bourge M, Kramdi A, Colot V, Grossniklaus U, Bowler C, Baroux C, Carbone A, Probst AV, ... ... Barneche F, et al. Histone H1 protects telomeric repeats from H3K27me3 invasion in Arabidopsis. Cell Reports. 42: 112894. PMID 37515769 DOI: 10.1016/j.celrep.2023.112894  0.783
2022 Johann To Berens P, Schivre G, Theune M, Peter J, Sall SO, Mutterer J, Barneche F, Bourbousse C, Molinier J. Advanced Image Analysis Methods for Automated Segmentation of Subnuclear Chromatin Domains. Epigenomes. 6. PMID 36278680 DOI: 10.3390/epigenomes6040034  0.774
2022 Patitaki E, Schivre G, Zioutopoulou A, Perrella G, Bourbousse C, Barneche F, Kaiserli E. Light, chromatin, action: nuclear events regulating light signaling in Arabidopsis. The New Phytologist. PMID 35949052 DOI: 10.1111/nph.18424  0.836
2022 Méteignier LV, Lecampion C, Velay F, Vriet C, Dimnet L, Rougée M, Breuer C, Soubigou-Taconnat L, Sugimoto K, Barneche F, Laloi C. Topoisomerase VI participates in an insulator-like function that prevents H3K9me2 spreading. Proceedings of the National Academy of Sciences of the United States of America. 119: e2001290119. PMID 35759655 DOI: 10.1073/pnas.2001290119  0.407
2022 Jurdak R, Rodrigues GAG, Chaumont N, Schivre G, Bourbousse C, Barneche F, Bou Dagher Kharrat M, Bailly C. Intracellular reactive oxygen species trafficking participates in seed dormancy alleviation in Arabidopsis seeds. The New Phytologist. 234: 850-866. PMID 35175638 DOI: 10.1111/nph.18038  0.765
2021 Cañibano E, Bourbousse C, Garcia-León M, Gómez BG, Wolff L, Garcia-Baudino C, Lozano-Durán R, Barneche F, Rubio V, Fonseca S. DET1-mediated COP1 regulation avoids HY5 activity over second-site gene targets to tune plant photomorphogenesis. Molecular Plant. PMID 33711490 DOI: 10.1016/j.molp.2021.03.009  0.829
2020 Grasser KD, Rubio V, Barneche F. Multifaceted activities of the plant SAGA complex. Biochimica Et Biophysica Acta. Gene Regulatory Mechanisms. 1864: 194613. PMID 32745625 DOI: 10.1016/j.bbagrm.2020.194613  0.495
2020 Bourbousse C, Barneche F, Laloi C. Plant Chromatin Catches the Sun. Frontiers in Plant Science. 10: 1728. PMID 32038692 DOI: 10.3389/fpls.2019.01728  0.819
2019 Rutowicz K, Lirski M, Mermaz B, Teano G, Schubert J, Mestiri I, Kroteń MA, Fabrice TN, Fritz S, Grob S, Ringli C, Cherkezyan L, Barneche F, Jerzmanowski A, Baroux C. Linker histones are fine-scale chromatin architects modulating developmental decisions in Arabidopsis. Genome Biology. 20: 157. PMID 31391082 DOI: 10.1186/S13059-019-1767-3  0.455
2019 Fiorucci AS, Bourbousse C, Concia L, Rougée M, Deton-Cabanillas AF, Zabulon G, Layat E, Latrasse D, Kim SK, Chaumont N, Lombard B, Stroebel D, Lemoine S, Mohammad A, Blugeon C, ... ... Barneche F, et al. Arabidopsis S2Lb links AtCOMPASS-like and SDG2 activity in H3K4me3 independently from histone H2B monoubiquitination. Genome Biology. 20: 100. PMID 31113491 DOI: 10.1186/S13059-019-1705-4  0.775
2019 Bourbousse C, Barneche F. A Dynamic Signaling Path to Chromatin-Level Control of Plant Drought Response. Molecular Plant. 12: 292-294. PMID 30738193 DOI: 10.1016/j.molp.2019.01.022  0.792
2018 Nassrallah A, Rougée M, Bourbousse C, Drevensek S, Fonseca S, Iniesto E, Ait-Mohamed O, Deton-Cabanillas AF, Zabulon G, Ahmed I, Stroebel D, Masson V, Lombard B, Eeckhout D, Gevaert K, ... ... Barneche F, et al. DET1-mediated degradation of a SAGA-like deubiquitination module controls H2Bub homeostasis. Elife. 7. PMID 30192741 DOI: 10.7554/Elife.37892  0.806
2018 Bourbousse C, Benhamed M, Barneche F. Profiling Developmentally and Environmentally Controlled Chromatin Reprogramming. Methods in Molecular Biology (Clifton, N.J.). 1675: 3-30. PMID 29052182 DOI: 10.1007/978-1-4939-7318-7_1  0.824
2017 Egea I, Pineda B, Ortíz-Atienza A, Plasencia FA, Drevensek S, García-Sogo B, Yuste-Lisbona FJ, Barrero J, Atarés A, Flores FB, Barneche F, Angosto T, Capel C, Salinas J, Vriezen W, et al. The SlCBL10 calcineurin B-like protein ensures plant growth under salt stress by regulating Na+ and Ca2+ homeostasis. Plant Physiology. PMID 29229696 DOI: 10.1104/Pp.17.01605  0.635
2017 Jégu T, Veluchamy A, Ramirez-Prado JS, Rizzi-Paillet C, Perez M, Lhomme A, Latrasse D, Coleno E, Vicaire S, Legras S, Jost B, Rougée M, Barneche F, Bergounioux C, Crespi M, et al. The Arabidopsis SWI/SNF protein BAF60 mediates seedling growth control by modulating DNA accessibility. Genome Biology. 18: 114. PMID 28619072 DOI: 10.1186/S13059-017-1246-7  0.441
2017 Snoek BL, Pavlova P, Tessadori F, Peeters AJM, Bourbousse C, Barneche F, de Jong JH, Fransz PF, van Zanten M. Genetic Dissection of Morphometric Traits Reveals that Phytochrome B Affects Nucleus Size and Heterochromatin Organization in Arabidopsis thaliana. G3 (Bethesda, Md.). PMID 28592555 DOI: 10.1534/g3.117.043539  0.789
2017 Barneche F, Baroux C. Unreeling the chromatin thread: a genomic perspective on organization around the periphery of the Arabidopsis nucleus. Genome Biology. 18: 97. PMID 28535814 DOI: 10.1186/s13059-017-1239-6  0.389
2016 Schalk C, Drevensek S, Kramdi A, Kassam M, Ahmed I, Cognat V, Graindorge S, Bergdoll M, Baumberger N, Heintz D, Bowler C, Genschik P, Barneche F, Colot V, Molinier J. DNA DAMAGE BINDING PROTEIN 2 (DDB2) Shapes the DNA Methylation Landscape. The Plant Cell. PMID 27531226 DOI: 10.1105/Tpc.16.00474  0.635
2015 Venturelli S, Belz RG, Kämper A, Berger A, von Horn K, Wegner A, Böcker A, Zabulon G, Langenecker T, Kohlbacher O, Barneche F, Weigel D, Lauer UM, Bitzer M, Becker C. Plants Release Precursors of Histone Deacetylase Inhibitors to Suppress Growth of Competitors. The Plant Cell. PMID 26530086 DOI: 10.1105/Tpc.15.00585  0.426
2015 Bourbousse C, Mestiri I, Zabulon G, Bourge M, Formiggini F, Koini MA, Brown SC, Fransz P, Bowler C, Barneche F. Light signaling controls nuclear architecture reorganization during seedling establishment. Proceedings of the National Academy of Sciences of the United States of America. 112: E2836-44. PMID 25964332 DOI: 10.1073/Pnas.1503512112  0.812
2014 Barneche F, Malapeira J, Mas P. The impact of chromatin dynamics on plant light responses and circadian clock function. Journal of Experimental Botany. 65: 2895-913. PMID 24520020 DOI: 10.1093/jxb/eru011  0.522
2012 Bourbousse C, Ahmed I, Roudier F, Zabulon G, Blondet E, Balzergue S, Colot V, Bowler C, Barneche F. Histone H2B monoubiquitination facilitates the rapid modulation of gene expression during arabidopsis photomorphogenesis Plos Genetics. 8. PMID 22829781 DOI: 10.1371/Journal.Pgen.1002825  0.817
2011 Roudier F, Ahmed I, Bérard C, Sarazin A, Mary-Huard T, Cortijo S, Bouyer D, Caillieux E, Duvernois-Berthet E, Al-Shikhley L, Giraut L, Desprás B, Drevensek S, Barneche F, Dérozier S, et al. Integrative epigenomic mapping defines four main chromatin states in Arabidopsis Embo Journal. 30: 1928-1938. PMID 21487388 DOI: 10.1038/Emboj.2011.103  0.724
2011 Castells E, Molinier J, Benvenuto G, Bourbousse C, Zabulon G, Zalc A, Cazzaniga S, Genschik P, Barneche F, Bowler C. The conserved factor DE-ETIOLATED 1 cooperates with CUL4-DDB1 DDB2 to maintain genome integrity upon UV stress Embo Journal. 30: 1162-1172. PMID 21304489 DOI: 10.1038/Emboj.2011.20  0.792
2010 Castells E, Molinier J, Drevensek S, Genschik P, Barneche F, Bowler C. Det1-1-induced UV-C hyposensitivity through UVR3 and PHR1 photolyase gene over-expression Plant Journal. 63: 392-404. PMID 20487384 DOI: 10.1111/J.1365-313X.2010.04249.X  0.688
2010 Enfissi EM, Barneche F, Ahmed I, Lichtlé C, Gerrish C, McQuinn RP, Giovannoni JJ, Lopez-Juez E, Bowler C, Bramley PM, Fraser PD. Integrative transcript and metabolite analysis of nutritionally enhanced DE-ETIOLATED1 downregulated tomato fruit. The Plant Cell. 22: 1190-215. PMID 20435899 DOI: 10.1105/Tpc.110.073866  0.673
2006 Barneche F, Winter V, Crèvecoeur M, Rochaix JD. ATAB2 is a novel factor in the signalling pathway of light-controlled synthesis of photosystem proteins. The Embo Journal. 25: 5907-18. PMID 17139246 DOI: 10.1038/sj.emboj.7601472  0.687
2005 Bellafiore S, Barneche F, Peltier G, Rochaix JD. State transitions and light adaptation require chloroplast thylakoid protein kinase STN7. Nature. 433: 892-5. PMID 15729347 DOI: 10.1038/nature03286  0.605
2005 Falciatore A, Merendino L, Barneche F, Ceol M, Meskauskiene R, Apel K, Rochaix JD. The FLP proteins act as regulators of chlorophyll synthesis in response to light and plastid signals in Chlamydomonas. Genes & Development. 19: 176-87. PMID 15630026 DOI: 10.1101/gad.321305  0.697
2003 Kruszka K, Barneche F, Guyot R, Ailhas J, Meneau I, Schiffer S, Marchfelder A, Echeverría M. Plant dicistronic tRNA-snoRNA genes: a new mode of expression of the small nucleolar RNAs processed by RNase Z. The Embo Journal. 22: 621-32. PMID 12554662 DOI: 10.1093/emboj/cdg040  0.305
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