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Dorothy A. Erie - Publications

Affiliations: 
Chemistry University of North Carolina, Chapel Hill, Chapel Hill, NC 
Area:
Scanning Force Microscopy, Biological Chemistry
Website:
http://www.chem.unc.edu/people/faculty/erie/index.html
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91 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Satusky MJ, Johnson CV, Erie DA. RAPID, INEXPENSIVE, SEQUENCE-INDEPENDENT FLUORESCENT LABELING OF PHOSPHOROTHIOATE DNA. Biophysical Journal. PMID 36793216 DOI: 10.1016/j.bpj.2023.02.011  0.381
2020 Hao P, LeBlanc SJ, Case BC, Elston TC, Hingorani MM, Erie DA, Weninger KR. Recurrent mismatch binding by MutS mobile clamps on DNA localizes repair complexes nearby. Proceedings of the National Academy of Sciences of the United States of America. PMID 32669440 DOI: 10.1073/Pnas.1918517117  0.522
2020 Bradford KC, Wilkins H, Hao P, Li ZM, Wang B, Burke D, Wu D, Smith AE, Spaller L, Du C, Gauer JW, Chan E, Hsieh P, Weninger KR, Erie DA. Dynamic human MutSα-MutLα complexes compact mismatched DNA. Proceedings of the National Academy of Sciences of the United States of America. PMID 32586954 DOI: 10.1073/Pnas.1918519117  0.849
2020 Andres SN, Li ZM, Erie DA, Williams RS. Correction: Ctp1 protein-DNA filaments promote DNA bridging and DNA double-strand break repair. The Journal of Biological Chemistry. 295: 896. PMID 31953249 DOI: 10.1074/Jbc.Aac119.012364  0.563
2019 Qiu R, DeRocco VC, Harris C, Sharma A, Hingorani MM, Erie DA, Weninger KR. Large conformational changes in MutS during DNA scanning, mismatch recognition and repair signaling. The Embo Journal. 38. PMID 30770383 DOI: 10.15252/embj.2019101518  0.825
2019 Biernat KA, Pellock SJ, Bhatt AP, Bivins MM, Walton WG, Tran BNT, Wei L, Snider MC, Cesmat AP, Tripathy A, Erie DA, Redinbo MR. Structure, function, and inhibition of drug reactivating human gut microbial β-glucuronidases. Scientific Reports. 9: 825. PMID 30696850 DOI: 10.1038/s41598-018-36069-w  0.484
2019 Andres SN, Li ZM, Erie DA, Williams RS. Ctp1 protein-DNA filaments promote DNA Bridging and DNA double-strand break repair. The Journal of Biological Chemistry. PMID 30626735 DOI: 10.1074/Jbc.Ra118.006759  0.585
2019 Biernat KA, Pellock SJ, Bhatt AP, Bivins MM, Walton WG, Tran BNT, Wei L, Snider MC, Cesmat AP, Tripathy A, Erie DA, Redinbo MR. Structure, function, and inhibition of drug reactivating human gut microbial beta-glucuronidases. Scientific Reports. 9: 825-825. DOI: 10.2210/Pdb6Ed2/Pdb  0.535
2019 Hao P, LeBlanc S, Erie DA, Weninger KR. Untangling DNA Mismatch Repair Complexes with smFRET and Tethered Particle Motion Analysis Biophysical Journal. 116: 77a. DOI: 10.1016/J.Bpj.2018.11.457  0.422
2019 LeBlanc SJ, Hao P, Hinds MA, Morgan AN, Gbozah K, Weninger KR, Erie DA. Investigating the Function of Mutl Conformational Changes in Mismatch Repair using smFRET Biophysical Journal. 116: 49a-50a. DOI: 10.1016/J.Bpj.2018.11.311  0.354
2018 Cannavo E, Johnson D, Andres SN, Kissling VM, Reinert JK, Garcia V, Erie DA, Hess D, Thomä NH, Enchev RI, Peter M, Williams RS, Neale MJ, Cejka P. Regulatory control of DNA end resection by Sae2 phosphorylation. Nature Communications. 9: 4016. PMID 30275497 DOI: 10.1038/S41467-018-06417-5  0.531
2018 LeBlanc SJ, Gauer JW, Hao P, Case BC, Hingorani MM, Weninger KR, Erie DA. Coordinated protein and DNA conformational changes govern mismatch repair initiation by MutS. Nucleic Acids Research. PMID 30272207 DOI: 10.1093/Nar/Gky865  0.851
2018 Hayne CK, Yumerefendi H, Cao L, Gauer JW, Lafferty MJ, Kuhlman B, Erie DA, Neher SB. We FRET so You Don't Have To: New Models of the Lipoprotein Lipase Dimer. Biochemistry. PMID 29303250 DOI: 10.1021/Acs.Biochem.7B01009  0.762
2018 Hao P, LeBlanc S, Erie D, Weninger K. Single Molecule Experiments Reveal Molecular Level Details of MutS-MutL Interactions in DNA Mismatch Activated Sliding Clamp Biophysical Journal. 114: 85a. DOI: 10.1016/J.Bpj.2017.11.508  0.473
2017 LeBlanc S, Wilkins H, Li Z, Kaur P, Wang H, Erie DA. Using Atomic Force Microscopy to Characterize the Conformational Properties of Proteins and Protein-DNA Complexes That Carry Out DNA Repair. Methods in Enzymology. 592: 187-212. PMID 28668121 DOI: 10.1016/Bs.Mie.2017.04.004  0.543
2017 Bellendir SP, Rognstad DJ, Morris LP, Zapotoczny G, Walton WG, Redinbo MR, Ramsden DA, Sekelsky J, Erie DA. Substrate preference of Gen endonucleases highlights the importance of branched structures as DNA damage repair intermediates. Nucleic Acids Research. PMID 28369583 DOI: 10.1093/Nar/Gkx214  0.619
2017 LeBlanc S, Gauer J, Hao P, Walser TY, Weninger K, Erie D. Dynamic Studies of MutS-MutL-DNA Complexes in Mismatch Repair Biophysical Journal. 112: 516a-517a. DOI: 10.1016/J.Bpj.2016.11.2793  0.828
2017 Hao P, Qiu R, Erie D, Weninger K. Mismatch Repair on the Go: Extending the Mechanical Model of DNA Mismatch Repair through Single Molecule Study Biophysical Journal. 112: 514a-515a. DOI: 10.1016/J.Bpj.2016.11.2782  0.514
2017 Erie D, Bradford K, Wilkins H, Bower J, Wang Z, Gauer J, Satusky M, Qiu R, Weninger K, Kaur P, Wang H. Single Molecule Fluorescence and Atomic Force Microscopy Studies of DNA Repair Biophysical Journal. 112: 7a. DOI: 10.1016/J.Bpj.2016.11.061  0.854
2016 Gauer JW, LeBlanc S, Hao P, Qiu R, Case BC, Sakato M, Hingorani MM, Erie DA, Weninger KR. Single-Molecule FRET to Measure Conformational Dynamics of DNA Mismatch Repair Proteins. Methods in Enzymology. 581: 285-315. PMID 27793283 DOI: 10.1016/Bs.Mie.2016.08.012  0.832
2016 Harrison JS, Cornett EM, Goldfarb D, DaRosa PA, Li ZM, Yan F, Dickson BM, Guo AH, Cantu DV, Kaustov L, Brown PJ, Arrowsmith CH, Erie DA, Major MB, Klevit RE, et al. Hemi-methylated DNA regulates DNA methylation inheritance through allosteric activation of H3 ubiquitylation by UHRF1. Elife. 5. PMID 27595565 DOI: 10.7554/Elife.17101  0.463
2016 Kaur P, Wu D, Lin J, Countryman P, Bradford KC, Erie DA, Riehn R, Opresko PL, Wang H. Enhanced electrostatic force microscopy reveals higher-order DNA looping mediated by the telomeric protein TRF2. Scientific Reports. 6: 20513. PMID 26856421 DOI: 10.1038/Srep20513  0.572
2016 Wu D, Kaur P, Li ZM, Bradford KC, Wang H, Erie DA. Visualizing the Path of DNA through Proteins Using DREEM Imaging. Molecular Cell. PMID 26774284 DOI: 10.1016/J.Molcel.2015.12.012  0.542
2016 Harrison JS, Cornett EM, Goldfarb D, DaRosa PA, Li ZM, Yan F, Dickson BM, Guo AH, Cantu DV, Kaustov L, Brown PJ, Arrowsmith CH, Erie DA, Major MB, Klevit RE, et al. Author response: Hemi-methylated DNA regulates DNA methylation inheritance through allosteric activation of H3 ubiquitylation by UHRF1 Elife. DOI: 10.7554/Elife.17101.024  0.426
2015 Vermulst M, Denney AS, Lang MJ, Hung CW, Moore S, Moseley MA, Thompson JW, Madden V, Gauer J, Wolfe KJ, Summers DW, Schleit J, Sutphin GL, Haroon S, Holczbauer A, ... ... Erie DA, et al. Corrigendum: Transcription errors induce proteotoxic stress and shorten cellular lifespan. Nature Communications. 6: 8738. PMID 26465398 DOI: 10.1038/Ncomms9738  0.736
2015 Kunkel TA, Erie DA. Eukaryotic Mismatch Repair in Relation to DNA Replication. Annual Review of Genetics. PMID 26436461 DOI: 10.1146/Annurev-Genet-112414-054722  0.518
2015 Vermulst M, Denney AS, Lang MJ, Hung CW, Moore S, Mosely AM, Thompson WJ, Madden V, Gauer J, Wolfe KJ, Summers DW, Schleit J, Sutphin GL, Haroon S, Holczbauer A, ... ... Erie DA, et al. Transcription errors induce proteotoxic stress and shorten cellular lifespan. Nature Communications. 6: 8065. PMID 26304740 DOI: 10.1038/Ncomms9065  0.747
2015 Qiu R, Sakato M, Sacho EJ, Wilkins H, Zhang X, Modrich P, Hingorani MM, Erie DA, Weninger KR. MutL traps MutS at a DNA mismatch. Proceedings of the National Academy of Sciences of the United States of America. 112: 10914-9. PMID 26283381 DOI: 10.1073/Pnas.1505655112  0.844
2014 Erie DA, Weninger KR. Single molecule studies of DNA mismatch repair. Dna Repair. 20: 71-81. PMID 24746644 DOI: 10.1016/J.Dnarep.2014.03.007  0.578
2014 DeRocco VC, Sass LE, Qiu R, Weninger KR, Erie DA. Dynamics of MutS-mismatched DNA complexes are predictive of their repair phenotypes. Biochemistry. 53: 2043-52. PMID 24588663 DOI: 10.1021/Bi401429B  0.811
2013 Archer EJ, Simpson MA, Watts NJ, O'Kane R, Wang B, Erie DA, McPherson A, Weeks KM. Long-range architecture in a viral RNA genome. Biochemistry. 52: 3182-90. PMID 23614526 DOI: 10.1021/Bi4001535  0.303
2012 Qiu R, DeRocco VC, Harris C, Sharma A, Hingorani MM, Erie DA, Weninger KR. Large conformational changes in MutS during DNA scanning, mismatch recognition and repair signalling. The Embo Journal. 31: 2528-40. PMID 22505031 DOI: 10.1038/Emboj.2012.95  0.847
2012 Geng H, Sakato M, DeRocco V, Yamane K, Du C, Erie DA, Hingorani M, Hsieh P. Biochemical analysis of the human mismatch repair proteins hMutSα MSH2(G674A)-MSH6 and MSH2-MSH6(T1219D). The Journal of Biological Chemistry. 287: 9777-91. PMID 22277660 DOI: 10.1074/Jbc.M111.316919  0.809
2011 Kennedy SR, Erie DA. Templated nucleoside triphosphate binding to a noncatalytic site on RNA polymerase regulates transcription. Proceedings of the National Academy of Sciences of the United States of America. 108: 6079-84. PMID 21447716 DOI: 10.1073/Pnas.1011274108  0.375
2011 Fronczek DN, Quammen C, Wang H, Kisker C, Superfine R, Taylor R, Erie DA, Tessmer I. High accuracy FIONA-AFM hybrid imaging. Ultramicroscopy. 111: 350-5. PMID 21329649 DOI: 10.1016/J.Ultramic.2011.01.020  0.377
2011 Tsai HH, Huang CH, Tessmer I, Erie DA, Chen CW. Linear Streptomyces plasmids form superhelical circles through interactions between their terminal proteins. Nucleic Acids Research. 39: 2165-74. PMID 21109537 DOI: 10.1093/Nar/Gkq1204  0.47
2010 DeRocco V, Anderson T, Piehler J, Erie DA, Weninger K. Four-color single-molecule fluorescence with noncovalent dye labeling to monitor dynamic multimolecular complexes. Biotechniques. 49: 807-16. PMID 21091445 DOI: 10.2144/000113551  0.813
2010 Chelico L, Prochnow C, Erie DA, Chen XS, Goodman MF. Structural model for deoxycytidine deamination mechanisms of the HIV-1 inactivation enzyme APOBEC3G. The Journal of Biological Chemistry. 285: 16195-205. PMID 20212048 DOI: 10.1074/Jbc.M110.107987  0.387
2010 Sass LE, Lanyi C, Weninger K, Erie DA. Single-molecule FRET TACKLE reveals highly dynamic mismatched DNA-MutS complexes. Biochemistry. 49: 3174-90. PMID 20180598 DOI: 10.1021/Bi901871U  0.84
2009 Erie DA, Kennedy SR. Forks, pincers, and triggers: the tools for nucleotide incorporation and translocation in multi-subunit RNA polymerases. Current Opinion in Structural Biology. 19: 708-14. PMID 19913407 DOI: 10.1016/J.Sbi.2009.10.008  0.346
2009 Weninger KR, Sass LE, DeRocco VC, Anderson T, Erie DA. DNA repair protein dynamics through single-molecule fluorescence Optics Infobase Conference Papers.  0.804
2008 Tessmer I, Yang Y, Zhai J, Du C, Hsieh P, Hingorani MM, Erie DA. Mechanism of MutS searching for DNA mismatches and signaling repair. The Journal of Biological Chemistry. 283: 36646-54. PMID 18854319 DOI: 10.1074/Jbc.M805712200  0.592
2008 Wong OK, Guthold M, Erie DA, Gelles J. Interconvertible lac repressor-DNA loops revealed by single-molecule experiments. Plos Biology. 6: e232. PMID 18828671 DOI: 10.1371/Journal.Pbio.0060232  0.532
2008 Campbell JF, Tessmer I, Thorp HH, Erie DA. Atomic force microscopy studies of DNA-wrapped carbon nanotube structure and binding to quantum dots. Journal of the American Chemical Society. 130: 10648-55. PMID 18627153 DOI: 10.1021/Ja801720C  0.495
2008 Wang H, Tessmer I, Croteau DL, Erie DA, Van Houten B. Functional characterization and atomic force microscopy of a DNA repair protein conjugated to a quantum dot. Nano Letters. 8: 1631-7. PMID 18444686 DOI: 10.1021/Nl080316L  0.371
2008 Chelico L, Sacho EJ, Erie DA, Goodman MF. A model for oligomeric regulation of APOBEC3G cytosine deaminase-dependent restriction of HIV. The Journal of Biological Chemistry. 283: 13780-91. PMID 18362149 DOI: 10.1074/Jbc.M801004200  0.826
2008 Sacho EJ, Kadyrov FA, Modrich P, Kunkel TA, Erie DA. Direct visualization of asymmetric adenine-nucleotide-induced conformational changes in MutL alpha. Molecular Cell. 29: 112-21. PMID 18206974 DOI: 10.1016/J.Molcel.2007.10.030  0.789
2008 Brar SS, Sacho EJ, Tessmer I, Croteau DL, Erie DA, Diaz M. Activation-induced deaminase, AID, is catalytically active as a monomer on single-stranded DNA. Dna Repair. 7: 77-87. PMID 17889624 DOI: 10.1016/J.Dnarep.2007.08.002  0.851
2008 Sacho EJ, Tessmer I, Diaz M, Erie DA. Response to "Is AID a monomer in solution" Dna Repair. 7: 351-352. DOI: 10.1016/J.Dnarep.2007.11.004  0.741
2006 Lemaire PA, Tessmer I, Craig R, Erie DA, Cole JL. Unactivated PKR exists in an open conformation capable of binding nucleotides. Biochemistry. 45: 9074-84. PMID 16866353 DOI: 10.1021/Bi060567D  0.338
2006 Holmes SF, Santangelo TJ, Cunningham CK, Roberts JW, Erie DA. Kinetic investigation of Escherichia coli RNA polymerase mutants that influence nucleotide discrimination and transcription fidelity. The Journal of Biological Chemistry. 281: 18677-83. PMID 16621791 DOI: 10.1074/Jbc.M600543200  0.776
2006 Wang H, DellaVecchia MJ, Skorvaga M, Croteau DL, Erie DA, Van Houten B. UvrB domain 4, an autoinhibitory gate for regulation of DNA binding and ATPase activity. The Journal of Biological Chemistry. 281: 15227-37. PMID 16595666 DOI: 10.1074/Jbc.M601476200  0.558
2006 Lamour V, Hogan BP, Erie DA, Darst SA. Crystal structure of Thermus aquaticus Gfh1, a Gre-factor paralog that inhibits rather than stimulates transcript cleavage. Journal of Molecular Biology. 356: 179-88. PMID 16337964 DOI: 10.1016/J.Jmb.2005.10.083  0.693
2005 Yang Y, Sass LE, Du C, Hsieh P, Erie DA. Determination of protein-DNA binding constants and specificities from statistical analyses of single molecules: MutS-DNA interactions. Nucleic Acids Research. 33: 4322-34. PMID 16061937 DOI: 10.1093/Nar/Gki708  0.838
2005 Kunkel TA, Erie DA. DNA mismatch repair. Annual Review of Biochemistry. 74: 681-710. PMID 15952900 DOI: 10.1146/Annurev.Biochem.74.082803.133243  0.533
2005 Tessmer I, Moore T, Lloyd RG, Wilson A, Erie DA, Allen S, Tendler SJ. AFM studies on the role of the protein RdgC in bacterial DNA recombination. Journal of Molecular Biology. 350: 254-62. PMID 15923011 DOI: 10.1016/J.Jmb.2005.04.043  0.578
2005 Brenowitz M, Erie DA, Chance MR. Catching RNA polymerase in the act of binding: intermediates in transcription illuminated by synchrotron footprinting. Proceedings of the National Academy of Sciences of the United States of America. 102: 4659-60. PMID 15781859 DOI: 10.1073/Pnas.0501152102  0.426
2004 Dwyer C, Vicci L, Poulton J, Erie D, Superfine R, Washburn S, Taylor RM. The design of DNA self-assembled computing circuitry Ieee Transactions On Very Large Scale Integration (Vlsi) Systems. 12: 1214-1220. DOI: 10.1109/Tvlsi.2004.836322  0.401
2003 Holmes SF, Foster JE, Erie DA. Kinetics of multisubunit RNA polymerases: experimental methods and data analysis. Methods in Enzymology. 371: 71-81. PMID 14712692 DOI: 10.1016/S0076-6879(03)71005-2  0.793
2003 Wang H, Yang Y, Schofield MJ, Du C, Fridman Y, Lee SD, Larson ED, Drummond JT, Alani E, Hsieh P, Erie DA. DNA bending and unbending by MutS govern mismatch recognition and specificity. Proceedings of the National Academy of Sciences of the United States of America. 100: 14822-7. PMID 14634210 DOI: 10.1073/Pnas.2433654100  0.585
2003 Holmes SF, Erie DA. Downstream DNA sequence effects on transcription elongation. Allosteric binding of nucleoside triphosphates facilitates translocation via a ratchet motion. The Journal of Biological Chemistry. 278: 35597-608. PMID 12813036 DOI: 10.1074/Jbc.M304496200  0.81
2003 Yang Y, Wang H, Erie DA. Quantitative characterization of biomolecular assemblies and interactions using atomic force microscopy. Methods (San Diego, Calif.). 29: 175-87. PMID 12606223 DOI: 10.1016/S1046-2023(02)00308-0  0.362
2003 Bao KK, Wang H, Miller JK, Erie DA, Skalka AM, Wong I. Functional oligomeric state of avian sarcoma virus integrase. The Journal of Biological Chemistry. 278: 1323-7. PMID 12446721 DOI: 10.1074/Jbc.C200550200  0.382
2002 Drotschmann K, Hall MC, Shcherbakova PV, Wang H, Erie DA, Brownewell FR, Kool ET, Kunkel TA. DNA binding properties of the yeast Msh2-Msh6 and Mlh1-Pms1 heterodimers. Biological Chemistry. 383: 969-75. PMID 12222686 DOI: 10.1515/Bc.2002.103  0.573
2002 Erie DA. The many conformational states of RNA polymerase elongation complexes and their roles in the regulation of transcription. Biochimica Et Biophysica Acta. 1577: 224-39. PMID 12213654 DOI: 10.1016/S0167-4781(02)00454-2  0.38
2002 Xue Y, Ratcliff GC, Wang H, Davis-Searles PR, Gray MD, Erie DA, Redinbo MR. A minimal exonuclease domain of WRN forms a hexamer on DNA and possesses both 3'- 5' exonuclease and 5'-protruding strand endonuclease activities. Biochemistry. 41: 2901-12. PMID 11863428 DOI: 10.1021/Bi0157161  0.823
2002 Hogan BP, Hartsch T, Erie DA. Transcript cleavage by Thermus thermophilus RNA polymerase. Effects of GreA and anti-GreA factors. The Journal of Biological Chemistry. 277: 967-75. PMID 11606592 DOI: 10.1074/Jbc.M108737200  0.684
2002 Dwyer C, Guthold M, Falvo M, Washburn S, Superfine R, Erie D. DNA-functionalized single-walled carbon nanotubes Nanotechnology. 13: 601-604. DOI: 10.1088/0957-4484/13/5/311  0.402
2002 Batalia MA, Protozanova E, Macgregor RB, Erie DA. Self-Assembly of Frayed Wires and Frayed-Wire Networks: Nanoconstruction with Multistranded DNA Nano Letters. 2: 269-274. DOI: 10.1021/Nl015672H  0.402
2002 Wang H, Yang Y, Erie DA. Atomic force microscopy studies of initiation steps of DNA mismatch repair Microscopy and Microanalysis. 8: 762-763.  0.361
2001 Guthold M, Erie DA. Single-molecule study reveals a complex E. coli RNA polymerase. Chembiochem : a European Journal of Chemical Biology. 2: 167-70. PMID 11828441 DOI: 10.1002/1439-7633(20010302)2:3<167::Aid-Cbic167>3.0.Co;2-S  0.327
2001 Hall MC, Wang H, Erie DA, Kunkel TA. High affinity cooperative DNA binding by the yeast Mlh1-Pms1 heterodimer. Journal of Molecular Biology. 312: 637-47. PMID 11575920 DOI: 10.1006/Jmbi.2001.4958  0.567
2001 Foster JE, Holmes SF, Erie DA. Allosteric binding of nucleoside triphosphates to RNA polymerase regulates transcription elongation. Cell. 106: 243-52. PMID 11511351 DOI: 10.1016/S0092-8674(01)00420-2  0.769
2001 Ratcliff GC, Erie DA. A novel single-molecule study to determine protein--protein association constants. Journal of the American Chemical Society. 123: 5632-5. PMID 11403593 DOI: 10.1021/Ja005750N  0.774
2001 Davis-Searles PR, Saunders AJ, Erie DA, Winzor DJ, Pielak GJ. Interpreting the effects of small uncharged solutes on protein-folding equilibria. Annual Review of Biophysics and Biomolecular Structure. 30: 271-306. PMID 11340061 DOI: 10.1146/Annurev.Biophys.30.1.271  0.329
2000 Xue Y, Hogan BP, Erie DA. Purification and initial characterization of RNA polymerase from Thermus thermophilus strain HB8. Biochemistry. 39: 14356-62. PMID 11087385 DOI: 10.1021/Bi0012538  0.738
2000 Saunders AJ, Davis-Searles PR, Allen DL, Pielak GJ, Erie DA. Osmolyte-induced changes in protein conformational equilibria. Biopolymers. 53: 293-307. PMID 10685050 DOI: 10.1002/(Sici)1097-0282(20000405)53:4<293::Aid-Bip2>3.0.Co;2-T  0.346
1999 Guthold M, Falvo M, Matthews WG, Paulson S, Mullin J, Lord S, Erie D, Washburn S, Superfine R, Brooks FP, Taylor RM. Investigation and modification of molecular structures with the nanoManipulator. Journal of Molecular Graphics & Modelling. 17: 187-97. PMID 10736776 DOI: 10.1016/S1093-3263(99)00030-3  0.338
1999 Erie D, Ratcliff G, Guthold M, Bullock V, Pliske M, Superfine R, Taylor R. Scanning Force Microscopy and Nanomangulation: Studies of Dna and Proteins Involved in Dna Repair Microscopy and Microanalysis. 5: 1004-1005. DOI: 10.1017/S1431927600018341  0.827
1999 Guthold M, Matthews G, Negishi A, Taylor RM, Erie D, Brooks FP, Superfine R. Quantitative manipulation of DNA and viruses with the nanomanipulator scanning force microscope Surface and Interface Analysis. 27: 437-443. DOI: 10.1002/(Sici)1096-9918(199905/06)27:5/6<437::Aid-Sia505>3.0.Co;2-N  0.372
1998 Davis-Searles PR, Morar AS, Saunders AJ, Erie DA, Pielak GJ. Sugar-induced molten-globule model. Biochemistry. 37: 17048-53. PMID 9836600 DOI: 10.1021/Bi981364V  0.319
1998 Ratcliff GC, Erie DA, Superfine R. Photothermal modulation for oscillating mode atomic force microscopy in solution Applied Physics Letters. 72: 1911-1913. DOI: 10.1063/1.121224  0.744
1994 Erie DA, Yang G, Schultz HC, Bustamante C. DNA bending by Cro protein in specific and nonspecific complexes: implications for protein site recognition and specificity. Science (New York, N.Y.). 266: 1562-6. PMID 7985026 DOI: 10.1126/Science.7985026  0.607
1994 Guthold M, Bezanilla M, Erie DA, Jenkins B, Hansma HG, Bustamante C. Following the assembly of RNA polymerase-DNA complexes in aqueous solutions with the scanning force microscope. Proceedings of the National Academy of Sciences of the United States of America. 91: 12927-31. PMID 7809148 DOI: 10.1073/Pnas.91.26.12927  0.644
1994 Bustamante C, Erie DA, Keller D. Biochemical and structural applications of scanning force microscopy Current Opinion in Structural Biology. 4: 750-760. DOI: 10.1016/S0959-440X(94)90175-9  0.487
1993 Erie DA, Breslauer KJ, Olson WK. A Monte Carlo method for generating structures of short single-stranded DNA sequences. Biopolymers. 33: 75-105. PMID 8427940 DOI: 10.1002/Bip.360330109  0.694
1993 Erie DA, Suri AK, Breslauer KJ, Jones RA, Olson WK. Theoretical predictions of DNA hairpin loop conformations: correlations with thermodynamic and spectroscopic data. Biochemistry. 32: 436-54. PMID 8422353 DOI: 10.1021/Bi00053A008  0.721
1993 Erie DA, Hajiseyedjavadi O, Young MC, von Hippel PH. Multiple RNA polymerase conformations and GreA: control of the fidelity of transcription. Science (New York, N.Y.). 262: 867-73. PMID 8235608 DOI: 10.1126/Science.8235608  0.577
1992 Erie DA, Yager TD, von Hippel PH. The single-nucleotide addition cycle in transcription: a biophysical and biochemical perspective. Annual Review of Biophysics and Biomolecular Structure. 21: 379-415. PMID 1381976 DOI: 10.1146/Annurev.Bb.21.060192.002115  0.555
1989 Erie DA, Jones RA, Olson WK, Sinha NK, Breslauer KJ. Melting behavior of a covalently closed, single-stranded, circular DNA. Biochemistry. 28: 268-73. PMID 2706250 DOI: 10.1021/Bi00427A037  0.749
1987 Erie D, Sinha N, Olson W, Jones R, Breslauer K. A dumbbell-shaped, double-hairpin structure of DNA: A thermodynamic investigation Biochemistry. 26: 7150-7159. PMID 3427065 DOI: 10.1021/Bi00396A042  0.692
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