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J. Jefferson Perry - Publications

Affiliations: 
Scripps Research Institute, La Jolla, La Jolla, CA, United States 
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26 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2015 Tsai CL, Williams GJ, Perry JJ, Tainer JA. An AAA+ ATPase Clamshell Targets Transposition. Cell. 162: 701-3. PMID 26276624 DOI: 10.1016/j.cell.2015.07.050  0.41
2014 Groocock LM, Nie M, Prudden J, Moiani D, Wang T, Cheltsov A, Rambo RP, Arvai AS, Hitomi C, Tainer JA, Luger K, Perry JJ, Lazzerini-Denchi E, Boddy MN. RNF4 interacts with both SUMO and nucleosomes to promote the DNA damage response. Embo Reports. 15: 601-8. PMID 24714598 DOI: 10.1002/Embr.201338369  0.441
2014 Shibata A, Moiani D, Arvai AS, Perry J, Harding SM, Genois MM, Maity R, van Rossum-Fikkert S, Kertokalio A, Romoli F, Ismail A, Ismalaj E, Petricci E, Neale MJ, Bristow RG, et al. DNA double-strand break repair pathway choice is directed by distinct MRE11 nuclease activities. Molecular Cell. 53: 7-18. PMID 24316220 DOI: 10.1016/J.Molcel.2013.11.003  0.437
2013 Perry JJ, Tainer JA. Developing advanced X-ray scattering methods combined with crystallography and computation. Methods (San Diego, Calif.). 59: 363-71. PMID 23376408 DOI: 10.1016/j.ymeth.2013.01.005  0.404
2012 Omanakuttan A, Nambiar J, Harris RM, Bose C, Pandurangan N, Varghese RK, Kumar GB, Tainer JA, Banerji A, Perry JJ, Nair BG. Anacardic acid inhibits the catalytic activity of matrix metalloproteinase-2 and matrix metalloproteinase-9. Molecular Pharmacology. 82: 614-22. PMID 22745359 DOI: 10.1124/Mol.112.079020  0.368
2011 Trego KS, Chernikova SB, Davalos AR, Perry JJ, Finger LD, Ng C, Tsai MS, Yannone SM, Tainer JA, Campisi J, Cooper PK. The DNA repair endonuclease XPG interacts directly and functionally with the WRN helicase defective in Werner syndrome. Cell Cycle (Georgetown, Tex.). 10: 1998-2007. PMID 21558802 DOI: 10.4161/Cc.10.12.15878  0.451
2011 Perry JJ, Tainer JA. All stressed out without ATM kinase. Science Signaling. 4: pe18. PMID 21467296 DOI: 10.1126/scisignal.2001961  0.447
2011 Prudden J, Perry JJ, Nie M, Vashisht AA, Arvai AS, Hitomi C, Guenther G, Wohlschlegel JA, Tainer JA, Boddy MN. DNA repair and global sumoylation are regulated by distinct Ubc9 noncovalent complexes. Molecular and Cellular Biology. 31: 2299-310. PMID 21444718 DOI: 10.1128/Mcb.05188-11  0.448
2011 Heideker J, Prudden J, Perry JJ, Tainer JA, Boddy MN. SUMO-targeted ubiquitin ligase, Rad60, and Nse2 SUMO ligase suppress spontaneous Top1-mediated DNA damage and genome instability. Plos Genetics. 7: e1001320. PMID 21408210 DOI: 10.1371/Journal.Pgen.1001320  0.452
2010 Perry JJ, Shin DS, Tainer JA. Amyotrophic lateral sclerosis. Advances in Experimental Medicine and Biology. 685: 9-20. PMID 20687491 DOI: 10.1007/978-1-4419-6448-9_2  0.569
2010 Perry JJ, Shin DS, Getzoff ED, Tainer JA. The structural biochemistry of the superoxide dismutases. Biochimica Et Biophysica Acta. 1804: 245-62. PMID 19914407 DOI: 10.1016/j.bbapap.2009.11.004  0.6
2009 Perry JJ, Harris RM, Moiani D, Olson AJ, Tainer JA. p38alpha MAP kinase C-terminal domain binding pocket characterized by crystallographic and computational analyses. Journal of Molecular Biology. 391: 1-11. PMID 19501598 DOI: 10.1016/j.jmb.2009.06.005  0.565
2009 Prudden J, Perry JJ, Arvai AS, Tainer JA, Boddy MN. Molecular mimicry of SUMO promotes DNA repair. Nature Structural & Molecular Biology. 16: 509-16. PMID 19363481 DOI: 10.1038/Nsmb.1582  0.455
2009 Perry JJ, Hearn AS, Cabelli DE, Nick HS, Tainer JA, Silverman DN. Contribution of human manganese superoxide dismutase tyrosine 34 to structure and catalysis. Biochemistry. 48: 3417-24. PMID 19265433 DOI: 10.1021/Bi8023288  0.452
2008 Pebernard S, Perry JJ, Tainer JA, Boddy MN. Nse1 RING-like domain supports functions of the Smc5-Smc6 holocomplex in genome stability. Molecular Biology of the Cell. 19: 4099-109. PMID 18667531 DOI: 10.1091/Mbc.E08-02-0226  0.438
2008 Perry JJ, Tainer JA, Boddy MN. A SIM-ultaneous role for SUMO and ubiquitin. Trends in Biochemical Sciences. 33: 201-8. PMID 18403209 DOI: 10.1016/J.Tibs.2008.02.001  0.437
2007 Prudden J, Pebernard S, Raffa G, Slavin DA, Perry JJ, Tainer JA, McGowan CH, Boddy MN. SUMO-targeted ubiquitin ligases in genome stability. The Embo Journal. 26: 4089-101. PMID 17762865 DOI: 10.1038/Sj.Emboj.7601838  0.453
2007 Tarpey PS, Raymond FL, Nguyen LS, Rodriguez J, Hackett A, Vandeleur L, Smith R, Shoubridge C, Edkins S, Stevens C, O'Meara S, Tofts C, Barthorpe S, Buck G, Cole J, ... ... Perry J, et al. Mutations in UPF3B, a member of the nonsense-mediated mRNA decay complex, cause syndromic and nonsyndromic mental retardation. Nature Genetics. 39: 1127-33. PMID 17704778 DOI: 10.1038/Ng2100  0.387
2007 Field M, Tarpey PS, Smith R, Edkins S, O'Meara S, Stevens C, Tofts C, Teague J, Butler A, Dicks E, Barthorpe S, Buck G, Cole J, Gray K, Halliday K, ... ... Perry J, et al. Mutations in the BRWD3 gene cause X-linked mental retardation associated with macrocephaly. American Journal of Human Genetics. 81: 367-74. PMID 17668385 DOI: 10.1086/520677  0.418
2007 Tarpey PS, Raymond FL, O'Meara S, Edkins S, Teague J, Butler A, Dicks E, Stevens C, Tofts C, Avis T, Barthorpe S, Buck G, Cole J, Gray K, Halliday K, ... ... Perry J, et al. Mutations in CUL4B, which encodes a ubiquitin E3 ligase subunit, cause an X-linked mental retardation syndrome associated with aggressive outbursts, seizures, relative macrocephaly, central obesity, hypogonadism, pes cavus, and tremor. American Journal of Human Genetics. 80: 345-52. PMID 17236139 DOI: 10.1086/511134  0.418
2006 Tarpey PS, Stevens C, Teague J, Edkins S, O'Meara S, Avis T, Barthorpe S, Buck G, Butler A, Cole J, Dicks E, Gray K, Halliday K, Harrison R, Hills K, ... ... Perry J, et al. Mutations in the gene encoding the Sigma 2 subunit of the adaptor protein 1 complex, AP1S2, cause X-linked mental retardation. American Journal of Human Genetics. 79: 1119-24. PMID 17186471 DOI: 10.1086/510137  0.432
2006 Ikediobi ON, Davies H, Bignell G, Edkins S, Stevens C, O'Meara S, Santarius T, Avis T, Barthorpe S, Brackenbury L, Buck G, Butler A, Clements J, Cole J, Dicks E, ... ... Perry J, et al. Mutation analysis of 24 known cancer genes in the NCI-60 cell line set. Molecular Cancer Therapeutics. 5: 2606-12. PMID 17088437 DOI: 10.1158/1535-7163.Mct-06-0433  0.389
2006 Perry JJ, Yannone SM, Holden LG, Hitomi C, Asaithamby A, Han S, Cooper PK, Chen DJ, Tainer JA. WRN exonuclease structure and molecular mechanism imply an editing role in DNA end processing. Nature Structural & Molecular Biology. 13: 414-22. PMID 16622405 DOI: 10.1038/nsmb1088  0.469
2006 Hunter C, Smith R, Cahill DP, Stephens P, Stevens C, Teague J, Greenman C, Edkins S, Bignell G, Davies H, O'Meara S, Parker A, Avis T, Barthorpe S, Brackenbury L, ... ... Perry J, et al. A hypermutation phenotype and somatic MSH6 mutations in recurrent human malignant gliomas after alkylator chemotherapy. Cancer Research. 66: 3987-91. PMID 16618716 DOI: 10.1158/0008-5472.Can-06-0127  0.427
2005 Ayala I, Perry JJ, Szczepanski J, Tainer JA, Vala MT, Nick HS, Silverman DN. Hydrogen bonding in human manganese superoxide dismutase containing 3-fluorotyrosine. Biophysical Journal. 89: 4171-9. PMID 16150974 DOI: 10.1529/Biophysj.105.060616  0.388
2004 Greenleaf WB, Perry JJ, Hearn AS, Cabelli DE, Lepock JR, Stroupe ME, Tainer JA, Nick HS, Silverman DN. Role of hydrogen bonding in the active site of human manganese superoxide dismutase. Biochemistry. 43: 7038-45. PMID 15170341 DOI: 10.1021/Bi049888K  0.402
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