Sofia Kirke Forslund, PhD

2012-2018 SCB EMBL, Heidelberg 
 2018- ECRC MDC, Berlin 
Metagenomics, evolution, antibiotic resistance, cardiometabolic health, orthology
"Sofia Forslund"

Dr Sofia Kirke Forslund (published as Kristoffer Forslund prior to transition in 2018) trained as a molecular biotechnologist in Uppsala, then in 2011 aquired a PhD in computational biology in Stockholm. After post-doctoral research at the EMBL she founded in 2018 the Host-Microbiome Systems Medicine of Cardiometabolic Disease group at the ECRC (joint MDC/Charité venture) in Berlin. Her work to date has focused in three main areas.

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Erik Sonnhammer grad student 2006-2011 Stockholm University
Peer Bork post-doc (Neurotree)
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Kushugulova A, Löber U, Akpanova S, et al. (2021) Dynamic Changes in Microbiome Composition Following Mare's Milk Intake for Prevention of Collateral Antibiotic Effect. Frontiers in Cellular and Infection Microbiology. 11: 622735
Vieira-Silva S, Falony G, Belda E, et al. (2020) Statin therapy is associated with lower prevalence of gut microbiota dysbiosis. Nature. 581: 310-315
Bartolomaeus H, Avery EG, Bartolomaeus TUP, et al. (2020) Blood Pressure Changes Correlate with Short-Chain Fatty Acids Production Shifts Under a Synbiotic Intervention. Cardiovascular Research
Persson E, Kaduk M, Forslund SK, et al. (2019) Domainoid: domain-oriented orthology inference. Bmc Bioinformatics. 20: 523
Mende DR, Letunic I, Maistrenko OM, et al. (2019) proGenomes2: an improved database for accurate and consistent habitat, taxonomic and functional annotations of prokaryotic genomes. Nucleic Acids Research
Forslund SK, Kaduk M, Sonnhammer ELL. (2019) Evolution of Protein Domain Architectures. Methods in Molecular Biology (Clifton, N.J.). 1910: 469-504
Glover N, Dessimoz C, Ebersberger I, et al. (2019) Advances and Applications in the Quest for Orthologs. Molecular Biology and Evolution
Hildebrand F, Moitinho-Silva L, Blasche S, et al. (2019) Antibiotics-induced monodominance of a novel gut bacterial order. Gut
Bartolomaeus H, Balogh A, Yakoub M, et al. (2018) The Short-Chain Fatty Acid Propionate Protects from Hypertensive Cardiovascular Damage. Circulation
Huerta-Cepas J, Szklarczyk D, Heller D, et al. (2018) eggNOG 5.0: a hierarchical, functionally and phylogenetically annotated orthology resource based on 5090 organisms and 2502 viruses. Nucleic Acids Research
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