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Timothy J. Looney, Ph.D. - Publications

Affiliations: 
Genetics University of Chicago, Chicago, IL 
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10 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Toro M, Pickle L, Chang J, Looney T, Lowman G, Andersen M, Hyland F. Abstract 3305: Comparative analysis of RNA versus DNA as input material for IGH repertoire sequencing based detection of rare clonal B cells at a frequency of 10E-6 Immunology. DOI: 10.1158/1538-7445.Am2020-3305  0.305
2017 Mongan A, Lowman G, Ku Y, Looney T, Lin L, Peng X, Hyland F. Abstract 3994: Using NGS to characterize 40 NSCLC tumor with gene expression and tumor infiltrating T cell repertoire profiling from FFPE and matched Fresh Frozen samples Cancer Research. 77: 3994-3994. DOI: 10.1158/1538-7445.Am2017-3994  0.391
2016 Aaker JD, Elbaz B, Wu Y, Looney TJ, Zhang L, Lahn BT, Popko B. Transcriptional Fingerprint of Hypomyelination in Zfp191null and Shiverer (Mbpshi) Mice. Asn Neuro. 8. PMID 27683878 DOI: 10.1177/1759091416670749  0.605
2014 Madzo J, Liu H, Rodriguez A, Vasanthakumar A, Sundaravel S, Caces DB, Looney TJ, Zhang L, Lepore JB, Macrae T, Duszynski R, Shih AH, Song CX, Yu M, Yu Y, et al. Hydroxymethylation at gene regulatory regions directs stem/early progenitor cell commitment during erythropoiesis. Cell Reports. 6: 231-44. PMID 24373966 DOI: 10.1016/J.Celrep.2013.11.044  0.666
2014 Looney TJ, Zhang L, Chen CH, Lee JH, Chari S, Mao FF, Pelizzola M, Zhang L, Lister R, Baker SW, Fernandes CJ, Gaetz J, Foshay KM, Clift KL, Zhang Z, et al. Systematic mapping of occluded genes by cell fusion reveals prevalence and stability of cis-mediated silencing in somatic cells. Genome Research. 24: 267-80. PMID 24310002 DOI: 10.1101/Gr.143891.112  0.507
2012 Ostler KR, Yang Q, Looney TJ, Zhang L, Vasanthakumar A, Tian Y, Kocherginsky M, Raimondi SL, DeMaio JG, Salwen HR, Gu S, Chlenski A, Naranjo A, Gill A, Peddinti R, et al. Truncated DNMT3B isoform DNMT3B7 suppresses growth, induces differentiation, and alters DNA methylation in human neuroblastoma. Cancer Research. 72: 4714-23. PMID 22815530 DOI: 10.1158/0008-5472.Can-12-0886  0.686
2012 Foshay KM, Looney TJ, Chari S, Mao FF, Lee JH, Zhang L, Fernandes CJ, Baker SW, Clift KL, Gaetz J, Di CG, Xiang AP, Lahn BT. Embryonic stem cells induce pluripotency in somatic cell fusion through biphasic reprogramming. Molecular Cell. 46: 159-70. PMID 22445485 DOI: 10.1016/J.Molcel.2012.02.013  0.727
2012 Gaetz J, Clift KL, Fernandes CJ, Mao FF, Lee JH, Zhang L, Baker SW, Looney TJ, Foshay KM, Yu WH, Xiang AP, Lahn BT. Evidence for a critical role of gene occlusion in cell fate restriction. Cell Research. 22: 848-58. PMID 22124232 DOI: 10.1038/Cr.2011.190  0.751
2012 Ostler KR, Yang Q, Vasanthakumar A, Zhang L, Looney TJ, Naranjo A, Salwen H, Kocherginsky M, Lahn BT, Cohn SL, Godley LA. Abstract 1040: A truncated DNMT3B protein (DNMT3B7) drives DNA methylation and suppresses growth in human neuroblastoma Cancer Research. 72: 1040-1040. DOI: 10.1158/1538-7445.Am2012-1040  0.7
2011 Song CX, Szulwach KE, Fu Y, Dai Q, Yi C, Li X, Li Y, Chen CH, Zhang W, Jian X, Wang J, Zhang L, Looney TJ, Zhang B, Godley LA, et al. Selective chemical labeling reveals the genome-wide distribution of 5-hydroxymethylcytosine. Nature Biotechnology. 29: 68-72. PMID 21151123 DOI: 10.1038/Nbt.1732  0.66
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