Bassem Al-Sady - Publications

Affiliations: 
University of California, San Francisco, San Francisco, CA 

21 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Muhammad A, Sarkadi Z, van Emden T, Mazumder A, Capella M, Fekete G, Sreechakram VNS, Al-Sady B, Papp B, Barrales RR, Braun S. A systematic quantitative approach comprehensively defines domain-specific functional pathways linked to heterochromatin regulation. Biorxiv : the Preprint Server For Biology. PMID 38405799 DOI: 10.1101/2024.02.13.579970  0.351
2023 Hamali B, Amine AAA, Al-Sady B. Regulation of the heterochromatin spreading reaction by acting factors. Open Biology. 13: 230271. PMID 37935357 DOI: 10.1098/rsob.230271  0.325
2023 Challal D, Menant A, Goksal C, Leroy E, Al-Sady B, Rougemaille M. A dual, catalytic role for the fission yeast Ccr4-Not complex in gene silencing and heterochromatin spreading. Genetics. PMID 37279920 DOI: 10.1093/genetics/iyad108  0.331
2022 Öztürk M, Freiwald A, Cartano J, Schmitt R, Dejung M, Luck K, Al-Sady B, Braun S, Levin M, Butter F. Proteome effects of genome-wide single gene perturbations. Nature Communications. 13: 6153. PMID 36257942 DOI: 10.1038/s41467-022-33814-8  0.332
2022 Greenstein RA, Ng H, Barrales RR, Tan C, Braun S, Al-Sady B. Local chromatin context regulates the genetic requirements of the heterochromatin spreading reaction. Plos Genetics. 18: e1010201. PMID 35584134 DOI: 10.1371/journal.pgen.1010201  0.319
2019 Greenstein RA, Barrales RR, Sanchez NA, Bisanz JE, Braun S, Al-Sady B. Set1/COMPASS repels heterochromatin invasion at euchromatic sites by disrupting Suv39/Clr4 activity and nucleosome stability. Genes & Development. PMID 31805521 DOI: 10.1101/Gad.328468.119  0.43
2018 Greenstein RA, Al-Sady B. Epigenetic fates of gene silencing established by heterochromatin spreading in cell identity and genome stability. Current Genetics. 65: 423-428. PMID 30390097 DOI: 10.1007/S00294-018-0901-1  0.312
2018 Greenstein RA, Jones SK, Spivey EC, Rybarski JR, Finkelstein IJ, Al-Sady B. Noncoding RNA-nucleated heterochromatin spreading is intrinsically labile and requires accessory elements for epigenetic stability. Elife. 7. PMID 30020075 DOI: 10.7554/Elife.32948  0.308
2016 Al-Sady B, Greenstein RA, El-Samad HJ, Braun S, Madhani HD. Sensitive and Quantitative Three-Color Protein Imaging in Fission Yeast Using Spectrally Diverse, Recoded Fluorescent Proteins with Experimentally-Characterized In Vivo Maturation Kinetics. Plos One. 11: e0159292. PMID 27479698 DOI: 10.1371/Journal.Pone.0159292  0.325
2016 Soy J, Leivar P, González-Schain N, Martín G, Diaz C, Sentandreu M, Al-Sady B, Quail PH, Monte E. Molecular convergence of clock and photosensory pathways through PIF3-TOC1 interaction and co-occupancy of target promoters. Proceedings of the National Academy of Sciences of the United States of America. 113: 4870-5. PMID 27071129 DOI: 10.1073/Pnas.1603745113  0.798
2015 Garcia JF, Al-Sady B, Madhani HD. Intrinsic Toxicity of Unchecked Heterochromatin Spread Is Suppressed by Redundant Chromatin Boundary Functions in Schizosacchromyces pombe. G3 (Bethesda, Md.). 5: 1453-61. PMID 25957277 DOI: 10.1534/G3.115.018663  0.416
2012 Leivar P, Tepperman JM, Cohn MM, Monte E, Al-Sady B, Erickson E, Quail PH. Dynamic antagonism between phytochromes and PIF family basic helix-loop-helix factors induces selective reciprocal responses to light and shade in a rapidly responsive transcriptional network in Arabidopsis. The Plant Cell. 24: 1398-419. PMID 22517317 DOI: 10.1105/Tpc.112.095711  0.79
2011 Canzio D, Chang EY, Shankar S, Kuchenbecker KM, Simon MD, Madhani HD, Narlikar GJ, Al-Sady B. Chromodomain-mediated oligomerization of HP1 suggests a nucleosome-bridging mechanism for heterochromatin assembly. Molecular Cell. 41: 67-81. PMID 21211724 DOI: 10.1016/J.Molcel.2010.12.016  0.301
2008 Leivar P, Monte E, Al-Sady B, Carle C, Storer A, Alonso JM, Ecker JR, Quail PH. The Arabidopsis phytochrome-interacting factor PIF7, together with PIF3 and PIF4, regulates responses to prolonged red light by modulating phyB levels. The Plant Cell. 20: 337-52. PMID 18252845 DOI: 10.1105/Tpc.107.052142  0.812
2008 Al-Sady B, Kikis EA, Monte E, Quail PH. Mechanistic duality of transcription factor function in phytochrome signaling. Proceedings of the National Academy of Sciences of the United States of America. 105: 2232-7. PMID 18245378 DOI: 10.1073/Pnas.0711675105  0.803
2007 Monte E, Al-Sady B, Leivar P, Quail PH. Out of the dark: how the PIFs are unmasking a dual temporal mechanism of phytochrome signalling. Journal of Experimental Botany. 58: 3125-33. PMID 17855731 DOI: 10.1093/Jxb/Erm186  0.81
2006 Al-Sady B, Ni W, Kircher S, Schäfer E, Quail PH. Photoactivated phytochrome induces rapid PIF3 phosphorylation prior to proteasome-mediated degradation. Molecular Cell. 23: 439-46. PMID 16885032 DOI: 10.1016/J.Molcel.2006.06.011  0.729
2004 Monte E, Tepperman JM, Al-Sady B, Kaczorowski KA, Alonso JM, Ecker JR, Li X, Zhang Y, Quail PH. The phytochrome-interacting transcription factor, PIF3, acts early, selectively, and positively in light-induced chloroplast development. Proceedings of the National Academy of Sciences of the United States of America. 101: 16091-8. PMID 15505214 DOI: 10.1073/Pnas.0407107101  0.726
2004 Khanna R, Huq E, Kikis EA, Al-Sady B, Lanzatella C, Quail PH. A novel molecular recognition motif necessary for targeting photoactivated phytochrome signaling to specific basic helix-loop-helix transcription factors. The Plant Cell. 16: 3033-44. PMID 15486100 DOI: 10.1105/Tpc.104.025643  0.766
2004 Huq E, Al-Sady B, Hudson M, Kim C, Apel K, Quail PH. Phytochrome-interacting factor 1 is a critical bHLH regulator of chlorophyll biosynthesis. Science (New York, N.Y.). 305: 1937-41. PMID 15448264 DOI: 10.1126/Science.1099728  0.812
2003 Huq E, Al-Sady B, Quail PH. Nuclear translocation of the photoreceptor phytochrome B is necessary for its biological function in seedling photomorphogenesis. The Plant Journal : For Cell and Molecular Biology. 35: 660-4. PMID 12940958 DOI: 10.1046/J.1365-313X.2003.01836.X  0.799
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