Seisuke Kimura - Publications

Affiliations: 
Kyoto Sangyo University, Kyōto-shi, Kyōto-fu, Japan 

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Year Citation  Score
2024 Sakamoto T, Ikematsu S, Nakayama H, Mandáková T, Gohari G, Sakamoto T, Li G, Hou H, Matsunaga S, Lysak MA, Kimura S. A chromosome-level genome assembly for the amphibious plant Rorippa aquatica reveals its allotetraploid origin and mechanisms of heterophylly upon submergence. Communications Biology. 7: 431. PMID 38637665 DOI: 10.1038/s42003-024-06088-7  0.72
2024 Koga H, Ikematsu S, Kimura S. Diving into the Water: Amphibious Plants as a Model for Investigating Plant Adaptations to Aquatic Environments. Annual Review of Plant Biology. PMID 38424069 DOI: 10.1146/annurev-arplant-062923-024919  0.384
2023 Murao M, Kato R, Kusano S, Hisamatsu R, Endo H, Kawabata Y, Kimura S, Sato A, Mori H, Itami K, Torii KU, Hagihara S, Uchida N. A Small Compound, HYGIC, Promotes Hypocotyl Growth Through Ectopic Ethylene Response. Plant & Cell Physiology. PMID 37498972 DOI: 10.1093/pcp/pcad083  0.466
2023 Nakayama H, Ichihashi Y, Kimura S. Diversity of tomato leaf form provides novel insights into breeding. Breeding Science. 73: 76-85. PMID 37168814 DOI: 10.1270/jsbbs.22061  0.784
2023 Nakashima Y, Kobayashi Y, Murao M, Kato R, Endo H, Higo A, Iwasaki R, Kojima M, Takebayashi Y, Sato A, Nomoto M, Sakakibara H, Tada Y, Itami K, Kimura S, et al. Identification of a pluripotency-inducing small compound, PLU, that induces callus formation Heat Shock Protein 90-mediated activation of auxin signaling. Frontiers in Plant Science. 14: 1099587. PMID 36968385 DOI: 10.3389/fpls.2023.1099587  0.482
2023 Hirano T, Okamoto A, Oda Y, Sakamoto T, Takeda S, Matsuura T, Ikeda Y, Higaki T, Kimura S, Sato MH. Ab-GALFA, A bioassay for insect gall formation using the model plant Arabidopsis thaliana. Scientific Reports. 13: 2554. PMID 36781988 DOI: 10.1038/s41598-023-29302-8  0.331
2023 Ikematsu S, Umase T, Shiozaki M, Nakayama S, Noguchi F, Sakamoto T, Hou H, Gohari G, Kimura S, Torii KU. Rewiring of hormones and light response pathways underlies the inhibition of stomatal development in an amphibious plant Rorippa aquatica underwater. Current Biology : Cb. PMID 36696900 DOI: 10.1016/j.cub.2022.12.064  0.323
2022 Choi SW, Kumaishi K, Motohashi R, Enoki H, Chacuttayapong W, Takamizo T, Saika H, Endo M, Yamada T, Hirose A, Koizuka N, Kimura S, Kawakatsu Y, Koga H, Ito E, et al. Oxicam-type nonsteroidal anti-inflammatory drugs enhance -mediated transient transformation in plants. Plant Biotechnology (Tokyo, Japan). 39: 323-327. PMID 36349241 DOI: 10.5511/plantbiotechnology.22.0312a  0.63
2022 Sakamoto T, Ikematsu S, Namie K, Hou H, Li G, Kimura S. Leaf Cell Morphology Alternation in Response to Environmental Signals in . International Journal of Molecular Sciences. 23. PMID 36142311 DOI: 10.3390/ijms231810401  0.306
2022 Suetsugu K, Fukushima K, Makino T, Ikematsu S, Sakamoto T, Kimura S. Transcriptomic heterochrony and completely cleistogamous flower development in the mycoheterotrophic orchid Gastrodia. The New Phytologist. PMID 36110047 DOI: 10.1111/nph.18495  0.363
2022 Li G, Yang J, Chen Y, Zhao X, Chen Y, Kimura S, Hu S, Hou H. SHOOT MERISTEMLESS participates in the heterophylly of Hygrophila difformis (Acanthaceae). Plant Physiology. PMID 35984299 DOI: 10.1093/plphys/kiac382  0.336
2021 Sakamoto AN, Sakamoto T, Yokota Y, Teranishi M, Yoshiyama KO, Kimura S. SOG1, a plant-specific master regulator of DNA damage responses, originated from nonvascular land plants. Plant Direct. 5: e370. PMID 34988354 DOI: 10.1002/pld3.370  0.384
2021 Kawakatsu Y, Sakamoto T, Nakayama H, Kaminoyama K, Igarashi K, Yasugi M, Kudoh H, Nagano AJ, Yano K, Kubo N, Notaguchi M, Kimura S. Combination of genetic analysis and ancient literature survey reveals the divergence of traditional Brassica rapa varieties from Kyoto, Japan. Horticulture Research. 8: 132. PMID 34059655 DOI: 10.1038/s41438-021-00569-0  0.742
2020 Amano R, Momoi R, Omata E, Nakahara T, Kaminoyama K, Kojima M, Takebayashi Y, Ikematsu S, Okegawa Y, Sakamoto T, Kasahara H, Sakakibara H, Motohashi K, Kimura S. Molecular and Biochemical Differences in Leaf Explants and the Implication for Regeneration Ability in (Brassicaceae). Plants (Basel, Switzerland). 9. PMID 33076473 DOI: 10.3390/plants9101372  0.379
2020 Hirano T, Kimura S, Sakamoto T, Okamoto A, Nakayama T, Matsuura T, Ikeda Y, Takeda S, Suzuki Y, Ohshima I, Sato MH. Reprogramming of the Developmental Program of During Initial Stage of Gall Induction by . Frontiers in Plant Science. 11: 471. PMID 32499792 DOI: 10.3389/Fpls.2020.00471  0.409
2020 Yoshiyama KO, Aoshima N, Takahashi N, Sakamoto T, Hiruma K, Saijo Y, Hidema J, Umeda M, Kimura S. SUPPRESSOR OF GAMMA RESPONSE 1 acts as a regulator coordinating crosstalk between DNA damage response and immune response in Arabidopsis thaliana. Plant Molecular Biology. PMID 32277429 DOI: 10.1007/S11103-020-00994-0  0.38
2020 Ishida T, Suzuki R, Nakagami S, Kuroha T, Sakamoto S, Nakata MT, Yokoyama R, Kimura S, Mitsuda N, Nishitani K, Sawa S. Root-knot nematodes modulate cell walls during root-knot formation in Arabidopsis roots. Journal of Plant Research. PMID 32246281 DOI: 10.1007/S10265-020-01186-Z  0.481
2020 Hanamata S, Sawada J, Ono S, Ogawa K, Fukunaga T, Nonomura KI, Kimura S, Kurusu T, Kuchitsu K. Impact of Autophagy on Gene Expression and Tapetal Programmed Cell Death During Pollen Development in Rice. Frontiers in Plant Science. 11: 172. PMID 32210988 DOI: 10.3389/Fpls.2020.00172  0.384
2020 Li G, Hu S, Yang J, Zhao X, Kimura S, Schultz EA, Hou H. Establishment of an Agrobacterium mediated transformation protocol for the detection of cytokinin in the heterophyllous plant Hygrophila difformis (Acanthaceae). Plant Cell Reports. PMID 32146519 DOI: 10.1007/S00299-020-02527-X  0.383
2020 Yamamoto M, Uji S, Sugiyama T, Sakamoto T, Kimura S, Endo T, Nishikawa SI. ERdj3B-mediated quality control maintains anther development at high temperatures. Plant Physiology. PMID 31980572 DOI: 10.1104/Pp.19.01356  0.3
2020 Gohari G, Mohammadi A, Akbari A, Panahirad S, Dadpour MR, Fotopoulos V, Kimura S. Titanium dioxide nanoparticles (TiO NPs) promote growth and ameliorate salinity stress effects on essential oil profile and biochemical attributes of Dracocephalum moldavica. Scientific Reports. 10: 912. PMID 31969653 DOI: 10.1038/S41598-020-57794-1  0.308
2020 Amano R, Nakayama H, Momoi R, Omata E, Gunji S, Takebayashi Y, Kojima M, Ikematsu S, Ikeuchi M, Iwase A, Sakamoto T, Kasahara H, Sakakibara H, Ferjani A, Kimura S. Molecular Basis for Natural Vegetative Propagation via Regeneration in North American Lake Cress, Rorippa aquatica (Brassicaceae). Plant & Cell Physiology. 61: 353-369. PMID 31651939 DOI: 10.1093/Pcp/Pcz202  0.757
2019 Takeda S, Yoza M, Amano T, Ohshima I, Hirano T, Sato MH, Sakamoto T, Kimura S. Comparative transcriptome analysis of galls from four different host plants suggests the molecular mechanism of gall development. Plos One. 14: e0223686. PMID 31647845 DOI: 10.1371/Journal.Pone.0223686  0.521
2019 Li G, Hu S, Hou H, Kimura S. Heterophylly: Phenotypic Plasticity of Leaf Shape in Aquatic and Amphibious Plants. Plants (Basel, Switzerland). 8. PMID 31623228 DOI: 10.3390/plants8100420  0.382
2019 Miyoshi S, Kimura S, Ootsuki R, Higaki T, Nakamasu A. Developmental analyses of divarications in leaves of an aquatic fern Microsorum pteropus and its varieties. Plos One. 14: e0210141. PMID 30682033 DOI: 10.1371/Journal.Pone.0210141  0.404
2018 Sakamoto T, Kimura S. Plant Temperature Sensors. Sensors (Basel, Switzerland). 18. PMID 30544707 DOI: 10.3390/S18124365  0.423
2018 Tsujimura M, Kaneko T, Sakamoto T, Kimura S, Shigyo M, Yamagishi H, Terachi T. Multichromosomal structure of the onion mitochondrial genome and a transcript analysis. Mitochondrion. PMID 30006008 DOI: 10.1016/J.Mito.2018.05.001  0.349
2018 Yoshiyama KO, Kimura S. Ser-Gln sites of SOG1 are rapidly hyperphosphorylated in response to DNA double-strand breaks. Plant Signaling & Behavior. 1-4. PMID 29939818 DOI: 10.1080/15592324.2018.1477904  0.302
2018 Nakayama H, Sakamoto T, Okegawa Y, Kaminoyama K, Fujie M, Ichihashi Y, Kurata T, Motohashi K, Al-Shehbaz I, Sinha N, Kimura S. Comparative transcriptomics with self-organizing map reveals cryptic photosynthetic differences between two accessions of North American Lake cress. Scientific Reports. 8: 3302. PMID 29459626 DOI: 10.1038/S41598-018-21646-W  0.78
2018 Uchida N, Takahashi K, Iwasaki R, Yamada R, Yoshimura M, Endo TA, Kimura S, Zhang H, Nomoto M, Tada Y, Kinoshita T, Itami K, Hagihara S, Torii KU. Chemical hijacking of auxin signaling with an engineered auxin-TIR1 pair. Nature Chemical Biology. PMID 29355850 DOI: 10.1038/Nchembio.2555  0.519
2017 Yoshiyama KO, Kaminoyama K, Sakamoto T, Kimura S. Increased Phosphorylation of Ser-Gln Sites on SUPPRESSOR OF GAMMA RESPONSE1 Strengthens the DNA Damage Response in . The Plant Cell. 29: 3255-3268. PMID 29208704 DOI: 10.1105/Tpc.17.00267  0.31
2017 Nakayama H, Sinha NR, Kimura S. How Do Plants and Phytohormones Accomplish Heterophylly, Leaf Phenotypic Plasticity, in Response to Environmental Cues. Frontiers in Plant Science. 8: 1717. PMID 29046687 DOI: 10.3389/Fpls.2017.01717  0.795
2017 Nakamasu A, Suematsu NJ, Kimura S. Asymmetries in leaf branch are associated with differential speeds along growth axes: A theoretical prediction. Developmental Dynamics : An Official Publication of the American Association of Anatomists. PMID 28865166 DOI: 10.1002/Dvdy.24587  0.366
2017 Kawakatsu Y, Nakayama H, Kaminoyama K, Igarashi K, Yasugi M, Kudoh H, Nagano AJ, Yano K, Kubo N, Kimura S. A GLABRA1 ortholog on LG A9 controls trichome number in the Japanese leafy vegetables Mizuna and Mibuna (Brassica rapa L. subsp. nipposinica L. H. Bailey): evidence from QTL analysis. Journal of Plant Research. PMID 28258381 DOI: 10.1007/S10265-017-0917-5  0.728
2015 Amano R, Nakayama H, Morohoshi Y, Kawakatsu Y, Ferjani A, Kimura S. A Decrease in Ambient Temperature Induces Post-Mitotic Enlargement of Palisade Cells in North American Lake Cress. Plos One. 10: e0141247. PMID 26569502 DOI: 10.1371/Journal.Pone.0141247  0.745
2015 Nakayama H, Kimura S. Leaves may function as temperature sensors in the heterophylly of Rorippa aquatica (Brassicaceae). Plant Signaling & Behavior. 10: e1091909. PMID 26367499 DOI: 10.1080/15592324.2015.1091909  0.757
2015 Aguilar-Martínez JA, Uchida N, Townsley B, West DA, Yanez A, Lynn N, Kimura S, Sinha N. Transcriptional, posttranscriptional, and posttranslational regulation of SHOOT MERISTEMLESS gene expression in Arabidopsis determines gene function in the shoot apex. Plant Physiology. 167: 424-42. PMID 25524441 DOI: 10.1104/Pp.114.248625  0.779
2015 Nakayama H, Kawade K, Tsukaya H, Kimura S. Detection of the Cell Proliferation Zone in Leaves by Using EdU Bio-Protocol. 5. DOI: 10.21769/BIOPROTOC.1600  0.648
2014 Nakayama H, Nakayama N, Seiki S, Kojima M, Sakakibara H, Sinha N, Kimura S. Regulation of the KNOX-GA gene module induces heterophyllic alteration in North American lake cress. The Plant Cell. 26: 4733-48. PMID 25516600 DOI: 10.1105/Tpc.114.130229  0.781
2014 Nakamasu A, Nakayama H, Nakayama N, Suematsu NJ, Kimura S. A developmental model for branching morphogenesis of lake cress compound leaf. Plos One. 9: e111615. PMID 25375102 DOI: 10.1371/Journal.Pone.0111615  0.72
2014 Bolger A, Scossa F, Bolger ME, Lanz C, Maumus F, Tohge T, Quesneville H, Alseekh S, Sørensen I, Lichtenstein G, Fich EA, Conte M, Keller H, Schneeberger K, Schwacke R, ... ... Kimura S, et al. The genome of the stress-tolerant wild tomato species Solanum pennellii. Nature Genetics. 46: 1034-8. PMID 25064008 DOI: 10.1038/Ng.3046  0.746
2014 Yoshiyama KO, Kimura S, Maki H, Britt AB, Umeda M. The role of SOG1, a plant-specific transcriptional regulator, in the DNA damage response Plant Signaling and Behavior. 9: e28889.1-e28889.8. PMID 24736489 DOI: 10.4161/Psb.28889  0.459
2014 Nakayama H, Fukushima K, Fukuda T, Yokoyama J, Kimura S. Molecular Phylogeny Determined Using Chloroplast DNA Inferred a New Phylogenetic Relationship of Rorippa aquatica (Eaton) EJ Palmer & Steyermark (Brassicaceae)—Lake Cress American Journal of Plant Sciences. 5: 48-54. DOI: 10.4236/Ajps.2014.51008  0.724
2013 Yoshiyama KO, Sakaguchi K, Kimura S. DNA damage response in plants: conserved and variable response compared to animals. Biology. 2: 1338-56. PMID 24833228 DOI: 10.3390/Biology2041338  0.37
2013 Yoshiyama KO, Kobayashi J, Ogita N, Ueda M, Kimura S, Maki H, Umeda M. ATM-mediated phosphorylation of SOG1 is essential for the DNA damage response in Arabidopsis. Embo Reports. 14: 817-22. PMID 23907539 DOI: 10.1038/Embor.2013.112  0.342
2013 Koenig D, Jiménez-Gómez JM, Kimura S, Fulop D, Chitwood DH, Headland LR, Kumar R, Covington MF, Devisetty UK, Tat AV, Tohge T, Bolger A, Schneeberger K, Ossowski S, Lanz C, et al. Comparative transcriptomics reveals patterns of selection in domesticated and wild tomato. Proceedings of the National Academy of Sciences of the United States of America. 110: E2655-62. PMID 23803858 DOI: 10.1073/Pnas.1309606110  0.774
2013 Sharlach M, Dahlbeck D, Liu L, Chiu J, Jiménez-Gómez JM, Kimura S, Koenig D, Maloof JN, Sinha N, Minsavage GV, Jones JB, Stall RE, Staskawicz BJ. Fine genetic mapping of RXopJ4, a bacterial spot disease resistance locus from Solanum pennellii LA716. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 126: 601-9. PMID 23117718 DOI: 10.1007/S00122-012-2004-6  0.714
2012 Kumar R, Ichihashi Y, Kimura S, Chitwood DH, Headland LR, Peng J, Maloof JN, Sinha NR. A High-Throughput Method for Illumina RNA-Seq Library Preparation. Frontiers in Plant Science. 3: 202. PMID 22973283 DOI: 10.3389/Fpls.2012.00202  0.725
2012 Alakonya A, Kumar R, Koenig D, Kimura S, Townsley B, Runo S, Garces HM, Kang J, Yanez A, David-Schwartz R, Machuka J, Sinha N. Interspecific RNA interference of SHOOT MERISTEMLESS-like disrupts Cuscuta pentagona plant parasitism. The Plant Cell. 24: 3153-66. PMID 22822208 DOI: 10.1105/Tpc.112.099994  0.762
2012 Nakayama N, Smith RS, Mandel T, Robinson S, Kimura S, Boudaoud A, Kuhlemeier C. Mechanical regulation of auxin-mediated growth. Current Biology : Cb. 22: 1468-76. PMID 22818916 DOI: 10.1016/J.Cub.2012.06.050  0.324
2012 Nakayama H, Nakayama N, Nakamasu A, Sinha N, Kimura S. Toward elucidating the mechanisms that regulate heterophylly Plant Morphology. 24: 57-63. DOI: 10.5685/Plmorphol.24.57  0.75
2010 Uchida N, Kimura S, Koenig D, Sinha N. Coordination of leaf development via regulation of KNOX1 genes. Journal of Plant Research. 123: 7-14. PMID 19506991 DOI: 10.1007/S10265-009-0248-2  0.787
2008 Kimura S, Sinha N. Tomato transformation. Csh Protocols. 2008: pdb.prot5084. PMID 21356724  0.441
2008 Kimura S, Sinha N. Grafting tomato plants. Csh Protocols. 2008: pdb.prot5083. PMID 21356723 DOI: 10.1101/Pdb.Prot5083  0.557
2008 Kimura S, Sinha N. Crossing tomato plants. Csh Protocols. 2008: pdb.prot5082. PMID 21356722 DOI: 10.1101/Pdb.Prot5082  0.59
2008 Kimura S, Sinha N. How to grow tomatoes. Csh Protocols. 2008: pdb.prot5081. PMID 21356721 DOI: 10.1101/Pdb.Prot5081  0.571
2008 Kimura S, Sinha N. Tomato (Solanum lycopersicum): A Model Fruit-Bearing Crop. Csh Protocols. 2008: pdb.emo105. PMID 21356708 DOI: 10.1101/Pdb.Emo105  0.637
2008 Kimura S, Koenig D, Kang J, Yoong FY, Sinha N. Natural variation in leaf morphology results from mutation of a novel KNOX gene. Current Biology : Cb. 18: 672-7. PMID 18424140 DOI: 10.1016/J.Cub.2008.04.008  0.763
2007 Takeuchi R, Kimura S, Saotome A, Sakaguchi K. Biochemical properties of a plastidial DNA polymerase of rice. Plant Molecular Biology. 64: 601-11. PMID 17522954 DOI: 10.1007/S11103-007-9179-2  0.309
2006 Koga A, Ishibashi T, Kimura S, Uchiyama Y, Sakaguchi K. Characterization of T-DNA insertion mutants and RNAi silenced plants of Arabidopsis thaliana UV-damaged DNA binding protein 2 (AtUV-DDB2). Plant Molecular Biology. 61: 227-40. PMID 16786303 DOI: 10.1007/S11103-006-6408-Z  0.422
2006 Saotome A, Kimura S, Mori Y, Uchiyama Y, Morohashi K, Sakaguchi K. Characterization of four RecQ homologues from rice (Oryza sativa L. cv. Nipponbare). Biochemical and Biophysical Research Communications. 345: 1283-91. PMID 16730655 DOI: 10.1016/J.Bbrc.2006.04.134  0.33
2006 Kimura S, Sakaguchi K. DNA repair in plants. Chemical Reviews. 106: 753-66. PMID 16464023 DOI: 10.1021/Cr040482N  0.384
2006 Ishibashi T, Kimura S, Sakaguchi K. A higher plant has three different types of RPA heterotrimeric complex. Journal of Biochemistry. 139: 99-104. PMID 16428324 DOI: 10.1093/Jb/Mvj014  0.34
2006 Ishibashi T, Isogai M, Kiyohara H, Hosaka M, Chiku H, Koga A, Yamamoto T, Uchiyama Y, Mori Y, Hashimoto J, Ausió J, Kimura S, Sakaguchi K. Higher plant RecA-like protein is homologous to RadA. Dna Repair. 5: 80-8. PMID 16140596 DOI: 10.1016/J.Dnarep.2005.07.010  0.412
2006 Ishibashi T, Kimura S, Furukawa T, Sakaguchi K. DNA Repair Mechanisms in UV-B Tolerant Plants Jarq-Japan Agricultural Research Quarterly. 40: 107-113. DOI: 10.6090/Jarq.40.107  0.407
2005 Mori Y, Kimura S, Saotome A, Kasai N, Sakaguchi N, Uchiyama Y, Ishibashi T, Yamamoto T, Chiku H, Sakaguchi K. Plastid DNA polymerases from higher plants, Arabidopsis thaliana. Biochemical and Biophysical Research Communications. 334: 43-50. PMID 15993837 DOI: 10.1016/J.Bbrc.2005.06.052  0.374
2005 Ishibashi T, Koga A, Yamamoto T, Uchiyama Y, Mori Y, Hashimoto J, Kimura S, Sakaguchi K. Two types of replication protein A in seed plants. The Febs Journal. 272: 3270-81. PMID 15978034 DOI: 10.1111/J.1742-4658.2005.04719.X  0.406
2005 Mori Y, Yamamoto T, Sakaguchi N, Ishibashi T, Furukawa T, Kadota Y, Kuchitsu K, Hashimoto J, Kimura S, Sakaguchi K. Characterization of the origin recognition complex (ORC) from a higher plant, rice (Oryza sativa L.). Gene. 353: 23-30. PMID 15939553 DOI: 10.1016/J.Gene.2005.03.047  0.457
2005 Yamamoto T, Mori Y, Ishibashi T, Uchiyama Y, Ueda T, Ando T, Hashimoto J, Kimura S, Sakaguchi K. Interaction between proliferating cell nuclear antigen (PCNA) and a DnaJ induced by DNA damage. Journal of Plant Research. 118: 91-7. PMID 15806324 DOI: 10.1007/S10265-005-0197-3  0.306
2005 Kimura S, Saotome A, Uchiyama Y, Mori Y, Tahira Y, Sakaguchi K. The expression of the rice (Oryza sativa L.) homologue of Snm1 is induced by DNA damages. Biochemical and Biophysical Research Communications. 329: 668-72. PMID 15737637 DOI: 10.1016/J.Bbrc.2005.01.161  0.326
2005 Yanagawa Y, Kimura S. Cell Cycle Regulation through Ubiquitin/Proteasome- Mediated Proteolysis in Plants Jarq-Japan Agricultural Research Quarterly. 39: 1-4. DOI: 10.6090/Jarq.39.1  0.353
2004 Ishikawa G, Kanai Y, Takata K, Takeuchi R, Shimanouchi K, Ruike T, Furukawa T, Kimura S, Sakaguchi K. DmGEN, a novel RAD2 family endo-exonuclease from Drosophila melanogaster. Nucleic Acids Research. 32: 6251-9. PMID 15576351 DOI: 10.1093/Nar/Gkh962  0.347
2004 Uchiyama Y, Kimura S, Yamamoto T, Ishibashi T, Sakaguchi K. Plant DNA polymerase lambda, a DNA repair enzyme that functions in plant meristematic and meiotic tissues. European Journal of Biochemistry. 271: 2799-807. PMID 15206945 DOI: 10.1111/J.1432-1033.2004.04214.X  0.431
2004 Kimura S, Tahira Y, Ishibashi T, Mori Y, Mori T, Hashimoto J, Sakaguchi K. DNA repair in higher plants; photoreactivation is the major DNA repair pathway in non-proliferating cells while excision repair (nucleotide excision repair and base excision repair) is active in proliferating cells. Nucleic Acids Research. 32: 2760-7. PMID 15150342 DOI: 10.1093/Nar/Gkh591  0.377
2004 Yamamoto T, Mori Y, Ishibashi T, Uchiyama Y, Sakaguchi N, Furukawa T, Hashimoto J, Kimura S, Sakaguchi K. Characterization of Rad6 from a higher plant, rice (Oryza sativa L.) and its interaction with Sgt1, a subunit of the SCF ubiquitin ligase complex. Biochemical and Biophysical Research Communications. 314: 434-9. PMID 14733924 DOI: 10.1016/J.Bbrc.2003.12.144  0.357
2004 Yamamoto T, Kimura S, Mori Y, Oka M, Ishibashi T, Yanagawa Y, Nara T, Nakagawa H, Hashimoto J, Sakaguchi K. Degradation of proliferating cell nuclear antigen by 26S proteasome in rice (Oryza sativa L.). Planta. 218: 640-6. PMID 14618323 DOI: 10.1007/S00425-003-1140-2  0.33
2003 Furukawa T, Ishibashi T, Kimura S, Tanaka H, Hashimoto J, Sakaguchi K. Characterization of all the subunits of replication factor C from a higher plant, rice (Oryza sativa L.), and their relation to development. Plant Molecular Biology. 53: 15-25. PMID 14756303 DOI: 10.1023/B:Plan.0000009258.04711.62  0.406
2003 Kimura S, Furukawa T, Kasai N, Mori Y, Kitamoto HK, Sugawara F, Hashimoto J, Sakaguchi K. Functional characterization of two flap endonuclease-1 homologues in rice. Gene. 314: 63-71. PMID 14527718 DOI: 10.1016/S0378-1119(03)00694-2  0.305
2003 Yamamoto T, Kimura S, Mori Y, Uchiyama Y, Ishibashi T, Hashimoto J, Sakaguchi K. Interaction between proliferating cell nuclear antigen and JUN-activation-domain-binding protein 1 in the meristem of rice, Oryza sativa L. Planta. 217: 175-83. PMID 12783325 DOI: 10.1007/S00425-003-0981-Z  0.389
2003 Ishibashi T, Kimura S, Yamamoto T, Furukawa T, Takata K, Uchiyama Y, Hashimoto J, Sakaguchi K. Rice UV-damaged DNA binding protein homologues are most abundant in proliferating tissues. Gene. 308: 79-87. PMID 12711392 DOI: 10.1016/S0378-1119(03)00447-5  0.382
2003 Furukawa T, Kimura S, Ishibashi T, Mori Y, Hashimoto J, Sakaguchi K. OsSEND-1: a new RAD2 nuclease family member in higher plants. Plant Molecular Biology. 51: 59-70. PMID 12602891 DOI: 10.1023/A:1020789314722  0.362
2002 Uchiyama Y, Hatanaka M, Kimura S, Ishibashi T, Ueda T, Sakakibara Y, Matsumoto T, Furukawa T, Hashimoto J, Sakaguchi K. Characterization of DNA polymerase delta from a higher plant, rice (Oryza sativa L.). Gene. 295: 19-26. PMID 12242007 DOI: 10.1016/S0378-1119(02)00822-3  0.408
2002 Kimura S, Uchiyama Y, Kasai N, Namekawa S, Saotome A, Ueda T, Ando T, Ishibashi T, Oshige M, Furukawa T, Yamamoto T, Hashimoto J, Sakaguchi K. A novel DNA polymerase homologous to Escherichia coli DNA polymerase I from a higher plant, rice (Oryza sativa L.). Nucleic Acids Research. 30: 1585-92. PMID 11917019 DOI: 10.1093/Nar/30.7.1585  0.417
2002 Yanagawa Y, Kimura S, Takase T, Sakaguchi K, Umeda M, Komamine A, Tanaka K, Hashimoto J, Sato T, Nakagawa H. Spatial distribution of the 26S proteasome in meristematic tissues and primordia of rice (Oryza sativa L.). Planta. 214: 703-7. PMID 11882938 DOI: 10.1007/S00425-001-0676-2  0.4
2002 Kimura S, Suzuki T, Yanagawa Y, Yamamoto T, Nakagawa H, Tanaka I, Hashimoto J, Sakaguchi K. Characterization of plant proliferating cell nuclear antigen (PCNA) and flap endonuclease‐1 (FEN‐1), and their distribution in mitotic and meiotic cell cycles Plant Journal. 28: 643-653. PMID 11851910 DOI: 10.1046/J.1365-313X.2001.01184.X  0.365
2001 Ishibashi T, Kimura S, Furukawa T, Hatanaka M, Hashimoto J, Sakaguchi K. Two types of replication protein A 70 kDa subunit in rice, Oryza sativa: molecular cloning, characterization, and cellular & tissue distribution. Gene. 272: 335-343. PMID 11470540 DOI: 10.1016/S0378-1119(01)00555-8  0.387
2001 Furukawa T, Kimura S, Ishibashi T, Hashimoto J, Sakaguchi K. A plant homologue of 36 kDa subunit of replication factor C: molecular cloning and characterization Plant Science. 161: 99-106. DOI: 10.1016/S0168-9452(01)00384-3  0.453
2000 Kimura S, Ishibashi T, Hatanaka M, Sakakibara Y, Hashimoto J, Sakaguchi K. Molecular cloning and characterization of a plant homologue of the origin recognition complex 1 (ORC1) Plant Science. 158: 33-39. PMID 10996242 DOI: 10.1016/S0168-9452(00)00297-1  0.433
2000 Kimura S, Ueda T, Hatanaka M, Takenouchi M, Hashimoto J, Sakaguchi K. Plant homologue of flap endonuclease-1: molecular cloning, characterization, and evidence of expression in meristematic tissues. Plant Molecular Biology. 42: 415-427. PMID 10798612 DOI: 10.1023/A:1006349511964  0.433
1997 Kimura S, Kai M, Kobayashi H, Suzuki A, Morioka H, Otsuka E, Sakaguchi K. A Structure-Specific Endonuclease from Cauliflower (Brassica Oleracea var. Botrytis) Inflorescence Nucleic Acids Research. 25: 4970-4976. PMID 9396804 DOI: 10.1093/Nar/25.24.4970  0.313
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