Antonis Rokas
Affiliations: | Biological Sciences | Vanderbilt University, Nashville, TN |
Area:
evolutionary biology, mycologyWebsite:
http://people.vanderbilt.edu/~antonis.rokas/Google:
"Antonis Rokas"Bio:
Parents
Sign in to add mentor| Eleftherios Zouros | research assistant | 1996-1997 | Vanderbilt (Evolution Tree) |
| Peter W H Holland | research assistant | 1997-1998 | Reading University (DevTree) |
| Graham N. Stone | grad student | 1998-2001 | Edinburgh |
| Sean B. Carroll | post-doc | 2002-2005 | UW Madison |
Children
Sign in to add trainee| Charu Balamurugan | research assistant | 2022- | Vanderbilt (Evolution Tree) |
| Adiyantara Gumilang | research assistant | 2022- | Vanderbilt (Evolution Tree) |
| Matthew A. Campbell | research assistant | 2011-2012 | Vanderbilt (Evolution Tree) |
| Brian Cooper | research assistant | 2013-2015 | Vanderbilt (Evolution Tree) |
| Rebecca Burke-Aguero | research assistant | 2015-2017 | Vanderbilt (Evolution Tree) |
| Kitae Kim | research assistant | 2016-2017 | Vanderbilt (Evolution Tree) |
| Maddison Johnson | research assistant | 2016-2018 | Vanderbilt (Evolution Tree) |
| Megan Phillips | research assistant | 2019-2021 | Vanderbilt (Evolution Tree) |
| Olivia Zheng | research assistant | 2019-2021 | Vanderbilt (Evolution Tree) |
| Miya Hugaboom | research assistant | 2021-2022 | Vanderbilt (Evolution Tree) |
| Alec Brown | grad student | 2018- | Vanderbilt (Evolution Tree) |
| E. Anne Hatmaker | grad student | 2018- | Vanderbilt (Evolution Tree) |
| Christina Chavez | grad student | 2020- | Vanderbilt (Evolution Tree) |
| Marie-Claire Harrison | grad student | 2020- | Vanderbilt (Evolution Tree) |
| Theodoros Danis | grad student | 2021- | Vanderbilt (Evolution Tree) |
| Kyle T. David | grad student | 2022- | Vanderbilt (Evolution Tree) |
| John G. Gibbons | grad student | 2007-2012 | Vanderbilt (Evolution Tree) |
| Leonidas Salichos | grad student | 2008-2014 | Vanderbilt (Evolution Tree) |
| David C. Rinker | grad student | 2010-2015 | Vanderbilt (Evolution Tree) |
| Yuyu Wang | grad student | 2014-2016 | Vanderbilt (Evolution Tree) |
| Abigail L. Lind | grad student | 2013-2017 | Vanderbilt (Evolution Tree) |
| Haley R. Eidem | grad student | 2013-2018 | Vanderbilt (Evolution Tree) |
| Mara Kim | grad student | 2013-2018 | Vanderbilt (Evolution Tree) |
| Michelle Moon | grad student | 2014-2019 | Vanderbilt (Evolution Tree) |
| Juan Felipe Ortiz | grad student | 2014-2019 | Vanderbilt (Evolution Tree) |
| Renato Santos | grad student | 2018-2021 | Vanderbilt (Evolution Tree) |
| Jacob L. Steenwyk | grad student | 2016-2022 | Vanderbilt (Evolution Tree) |
| Jason C. Slot | post-doc | Vanderbilt (Evolution Tree) | |
| Dana Lin | post-doc | 2022- | Vanderbilt (Evolution Tree) |
| Thomas Sauters | post-doc | 2023- | Vanderbilt (Evolution Tree) |
| Karin Steffen | post-doc | 2023- | Vanderbilt (Evolution Tree) |
| Ioannis Stergiopoulos | post-doc | 2011-2011 | Vanderbilt (Evolution Tree) |
| Kriston L. McGary | post-doc | 2009-2016 | Vanderbilt (Chemistry Tree) |
| Xiaofan Zhou | post-doc | 2011-2016 | Vanderbilt (Evolution Tree) |
| Jennifer H. Wisecaver | post-doc | 2013-2017 | Vanderbilt (Evolution Tree) |
| Julie B. Phillips | post-doc | 2014-2017 | Vanderbilt (Evolution Tree) |
| Youhuang Bai | post-doc | 2017-2018 | Vanderbilt (Evolution Tree) |
| Mingshuang Wang | post-doc | 2017-2018 | Vanderbilt (Evolution Tree) |
| Xing-Xing Shen | post-doc | 2014-2019 | (Evolution Tree) |
| Yuanning Li | post-doc | 2019-2021 | Vanderbilt (Evolution Tree) |
| Matthew E. Mead | post-doc | 2015-2022 | Vanderbilt (Evolution Tree) |
| Abigail Leavitt LaBella | post-doc | 2017-2022 | Vanderbilt (Marine Ecology Tree) |
| Carla Goncalves | post-doc | 2022-2022 | Vanderbilt (Evolution Tree) |
| Holly Elmore | research scientist | 2011-2013 | Vanderbilt (Evolution Tree) |
| George Greene | research scientist | 2012-2014 | Vanderbilt (Evolution Tree) |
| Sean B. King | research scientist | 2014-2015 | Vanderbilt (Evolution Tree) |
| Samuel P. Smith | research scientist | 2015-2017 | Vanderbilt (Evolution Tree) |
| Alexander T. Borowsky | research scientist | 2015-2018 | Vanderbilt (Evolution Tree) |
| Zackery Ely | research scientist | 2016-2018 | Vanderbilt (Evolution Tree) |
Collaborators
Sign in to add collaborator| Nicholas H. Oberlies | collaborator | Vanderbilt (Chemistry Tree) | |
| Aaron Louis Fidler | collaborator | 2013- | (Chemistry Tree) |
BETA: Related publications
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Publications
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| Zavala B, Dineen L, Fisher KJ, et al. (2024) Genomic factors shaping codon usage across the Saccharomycotina subphylum. Biorxiv : the Preprint Server For Biology |
| Brown A, Steenwyk JL, Rokas A. (2024) Genome-wide patterns of non-coding and protein-coding sequence variation in the major fungal pathogen Aspergillus fumigatus. G3 (Bethesda, Md.) |
| Harrison MC, Ubbelohde EJ, LaBella AL, et al. (2024) Machine learning enables identification of an alternative yeast galactose utilization pathway. Proceedings of the National Academy of Sciences of the United States of America. 121: e2315314121 |
| Opulente DA, LaBella AL, Harrison MC, et al. (2024) Genomic factors shape carbon and nitrogen metabolic niche breadth across Saccharomycotina yeasts. Science (New York, N.Y.). 384: eadj4503 |
| Balamurugan C, Steenwyk JL, Goldman GH, et al. (2024) The evolution of the gliotoxin biosynthetic gene cluster in Penicillium fungi. G3 (Bethesda, Md.) |
| Rinker DC, Sauters TJC, Steffen K, et al. (2024) Strain heterogeneity in a non-pathogenic fungus highlights factors contributing to virulence. Biorxiv : the Preprint Server For Biology |
| Steenwyk JL, Balamurugan C, Raja HA, et al. (2024) Phylogenomics reveals extensive misidentification of fungal strains from the genus . Microbiology Spectrum. e0398023 |
| Sun L, David KT, Wolters JF, et al. (2024) Functional and evolutionary integration of a fungal gene with a bacterial operon. Molecular Biology and Evolution |
| David KT, Harrison MC, Opulente DA, et al. (2024) Saccharomycotina yeasts defy long-standing macroecological patterns. Proceedings of the National Academy of Sciences of the United States of America. 121: e2316031121 |
| Pontes A, Paraíso F, Liu YC, et al. (2024) Tracking alternative versions of the galactose gene network in the genus and their expansion after domestication. Iscience. 27: 108987 |