Andre Levchenko - Publications

Biomedical Engineering Yale University, New Haven, CT 

112 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Wagner GP, Kshitiz, Levchenko A. Comments on Boddy 2020: Available data suggest positive relationship between placental invasion and malignancy. Evolution, Medicine, and Public Health. 2020: 211-214. PMID 33214901 DOI: 10.1093/emph/eoaa024  0.88
2020 Kshitiz, Afzal J, Maziarz JD, Hamidzadeh A, Liang C, Erkenbrack EM, Kim HN, Haeger JD, Pfarrer C, Hoang T, Ott T, Spencer T, Pavličev M, Antczak DF, Levchenko A, et al. Author Correction: Evolution of placental invasion and cancer metastasis are causally linked. Nature Ecology & Evolution. PMID 31949306 DOI: 10.1038/S41559-020-1100-2  0.88
2019 Raredon MSB, Adams TS, Suhail Y, Schupp JC, Poli S, Neumark N, Leiby KL, Greaney AM, Yuan Y, Horien C, Linderman G, Engler AJ, Boffa DJ, Kluger Y, Rosas IO, ... Levchenko A, et al. Single-cell connectomic analysis of adult mammalian lungs. Science Advances. 5: eaaw3851. PMID 31840053 DOI: 10.1126/Sciadv.Aaw3851  0.4
2019 Kshitiz, Afzal J, Maziarz JD, Hamidzadeh A, Liang C, Erkenbrack EM, Nam H, Haeger JD, Pfarrer C, Hoang T, Ott T, Spencer T, Pavličev M, Antczak DF, Levchenko A, et al. Evolution of placental invasion and cancer metastasis are causally linked. Nature Ecology & Evolution. PMID 31768023 DOI: 10.1038/S41559-019-1046-4  0.88
2019 Suhail Y, Cain MP, Vanaja K, Kurywchak PA, Levchenko A, Kalluri R, Kshitiz. Systems Biology of Cancer Metastasis. Cell Systems. 9: 109-127. PMID 31465728 DOI: 10.1016/J.Cels.2019.07.003  0.88
2019 Park J, Kim DH, Shah SR, Kim HN, Kshitiz, Kim P, Quiñones-Hinojosa A, Levchenko A. Switch-like enhancement of epithelial-mesenchymal transition by YAP through feedback regulation of WT1 and Rho-family GTPases. Nature Communications. 10: 2797. PMID 31243273 DOI: 10.1038/S41467-019-10729-5  1
2019 Kshitiz, Ellison DD, Suhail Y, Afzal J, Woo L, Kilic O, Spees J, Levchenko A. Dynamic secretome of bone marrow-derived stromal cells reveals a cardioprotective biochemical cocktail. Proceedings of the National Academy of Sciences of the United States of America. PMID 31239339 DOI: 10.1073/Pnas.1902598116  0.88
2019 Kang TY, Ellison D, Lee SH, Ewald AJ, Levchenko A. 3D Analysis of Multi-cellular Responses to Chemoattractant Gradients. Journal of Visualized Experiments : Jove. PMID 31180367 DOI: 10.3791/59226  0.4
2019 Kilic O, Yoon A, Shah SR, Yong HM, Ruiz-Valls A, Chang H, Panettieri RA, Liggett SB, Quiñones-Hinojosa A, An SS, Levchenko A. A microphysiological model of the bronchial airways reveals the interplay of mechanical and biochemical signals in bronchospasm. Nature Biomedical Engineering. PMID 31150010 DOI: 10.1038/S41551-019-0366-7  0.6
2019 Kshitiz, Afzal J, Suhail Y, Chang H, Dang CV, Levchenko A. Abstract 4359: Oscillatory HIF-1α induction promotes proliferation of hypoxic cells through a lactate dependent quorum autophagy response Cancer Research. 79: 4359-4359. DOI: 10.1158/1538-7445.Am2019-4359  0.88
2018 Kim DH, Ewald AJ, Park J, Kshitiz, Kwak M, Gray RS, Su CY, Seo J, An SS, Levchenko A. Biomechanical interplay between anisotropic re-organization of cells and the surrounding matrix underlies transition to invasive cancer spread. Scientific Reports. 8: 14210. PMID 30242256 DOI: 10.1038/S41598-018-32010-3  1
2018 Park J, Kim DH, Levchenko A. Topotaxis: A New Mechanism of Directed Cell Migration in Topographic ECM Gradients. Biophysical Journal. 114: 1257-1263. PMID 29590582 DOI: 10.1016/J.Bpj.2017.11.3813  1
2017 Shah SR, David JM, Tippens ND, Mohyeldin A, Martinez-Gutierrez JC, Ganaha S, Schiapparelli P, Hamilton DH, Palena C, Levchenko A, Quiñones-Hinojosa A. Brachyury-YAP Regulatory Axis Drives Stemness and Growth in Cancer. Cell Reports. 21: 495-507. PMID 29020634 DOI: 10.1016/J.Celrep.2017.09.057  0.36
2017 Park J, Holmes WR, Lee SH, Kim HN, Kim DH, Kwak MK, Wang CJ, Edelstein-Keshet L, Levchenko A. Mechanochemical feedback underlies coexistence of qualitatively distinct cell polarity patterns within diverse cell populations. Proceedings of the National Academy of Sciences of the United States of America. PMID 28655842 DOI: 10.1073/Pnas.1700054114  1
2017 Nishimura S, Mishra-Gorur K, Park J, Surovtseva YV, Sebti SM, Levchenko A, Louvi A, Gunel M. Combined HMG-COA reductase and prenylation inhibition in treatment of CCM. Proceedings of the National Academy of Sciences of the United States of America. PMID 28500274 DOI: 10.1073/Pnas.1702942114  1
2017 Holmes WR, Park J, Levchenko A, Edelstein-Keshet L. A mathematical model coupling polarity signaling to cell adhesion explains diverse cell migration patterns. Plos Computational Biology. 13: e1005524. PMID 28472054 DOI: 10.1371/Journal.Pcbi.1005524  1
2017 Habibi I, Cheong R, Lipniacki T, Levchenko A, Emamian ES, Abdi A. Computation and measurement of cell decision making errors using single cell data. Plos Computational Biology. 13: e1005436. PMID 28379950 DOI: 10.1371/Journal.Pcbi.1005436  0.4
2016 Shah SR, Tippens N, Park J, Mohyeldin A, Vela G, Martinez-Gutierrez JC, Margolis SS, Schmidt S, Levchenko A, Quinones-Hinojosa A. 217 YAP Is Ready to Rac and Rho: Elucidation of a Novel YAP-Driven Network That Potentiates Brain Cancer Cell Dispersal and Confers Poor Survival in Patients. Neurosurgery. 63: 185. PMID 27399496 DOI: 10.1227/01.Neu.0000489786.22041.2D  1
2016 Smith CL, Kilic O, Schiapparelli P, Guerrero-Cazares H, Kim DH, Sedora-Roman NI, Gupta S, O'Donnell T, Chaichana KL, Rodriguez FJ, Abbadi S, Park J, Quiñones-Hinojosa A, Levchenko A. Migration Phenotype of Brain-Cancer Cells Predicts Patient Outcomes. Cell Reports. PMID 27292647 DOI: 10.1016/J.Celrep.2016.05.042  0.92
2016 Smith T, Fancher S, Levchenko A, Nemenman I, Mugler A. Role of spatial averaging in multicellular gradient sensing. Physical Biology. 13: 035004. PMID 27203129 DOI: 10.1088/1478-3975/13/3/035004  0.4
2016 Park J, Kim DH, Kim HN, Wang CJ, Kwak MK, Hur E, Suh KY, An SS, Levchenko A. Directed migration of cancer cells by the graded texture of the underlying matrix. Nature Materials. PMID 26974411 DOI: 10.1038/Nmat4586  0.92
2016 Noren DP, Chou WH, Lee SH, Qutub AA, Warmflash A, Wagner DS, Popel AS, Levchenko A. Endothelial cells decode VEGF-mediated Ca2+ signaling patterns to produce distinct functional responses. Science Signaling. 9: ra20. PMID 26905425 DOI: 10.1126/Scisignal.Aad3188  0.92
2016 Molitoris JM, Paliwal S, Sekar RB, Blake R, Park J, Trayanova NA, Tung L, Levchenko A. Precisely parameterized experimental and computational models of tissue organization. Integrative Biology : Quantitative Biosciences From Nano to Macro. PMID 26822672 DOI: 10.1039/C5Ib00270B  0.92
2016 Ellison D, Mugler A, Brennan MD, Lee SH, Huebner RJ, Shamir ER, Woo LA, Kim J, Amar P, Nemenman I, Ewald AJ, Levchenko A. Cell-cell communication enhances the capacity of cell ensembles to sense shallow gradients during morphogenesis. Proceedings of the National Academy of Sciences of the United States of America. PMID 26792522 DOI: 10.1073/Pnas.1516503113  0.92
2016 Mugler A, Levchenko A, Nemenman I. Limits to the precision of gradient sensing with spatial communication and temporal integration. Proceedings of the National Academy of Sciences of the United States of America. PMID 26792517 DOI: 10.1073/Pnas.1509597112  0.4
2016 Fancher S, Levchenko A, Nemenman I, Mugler A. Fundamental Limits to the Precision of Multicellular Sensing Biophysical Journal. 110. DOI: 10.1016/J.Bpj.2015.11.1884  0.4
2016 Kshitiz, Afzal J, Chang H, Goyal R, Levchenko A. Mechanics of Microenvironment as Instructive Cues Guiding Stem Cell Behavior Stem Cell Reports. 2: 62-72. DOI: 10.1007/S40778-016-0033-9  0.88
2015 Yaniv Y, Ganesan A, Yang D, Ziman BD, Lyashkov AE, Levchenko A, Zhang J, Lakatta EG. Real-time relationship between PKA biochemical signal network dynamics and increased action potential firing rate in heart pacemaker cells: Yaniv. Kinetics of PKA activation in heart pacemaker cells. Journal of Molecular and Cellular Cardiology. PMID 26241846 DOI: 10.1016/J.Yjmcc.2015.07.024  0.92
2015 Lin B, Yin T, Wu YI, Inoue T, Levchenko A. Interplay between chemotaxis and contact inhibition of locomotion determines exploratory cell migration. Nature Communications. 6: 6619. PMID 25851023 DOI: 10.1038/Ncomms7619  0.92
2015 Kshitiz, Afzal J, Suhail Y, Ahn EH, Goyal R, Hubbi ME, Hussaini Q, Ellison DD, Goyal J, Nacev B, Kim DH, Lee JH, Frankel S, Gray K, Bankoti R, ... ... Levchenko A, et al. Control of the interface between heterotypic cell populations reveals the mechanism of intercellular transfer of signaling proteins. Integrative Biology : Quantitative Biosciences From Nano to Macro. 7: 364-72. PMID 25784457 DOI: 10.1039/C4Ib00209A  0.92
2015 Smith CL, Chaichana KL, Lee YM, Lin B, Stanko KM, O'Donnell T, Gupta S, Shah SR, Wang J, Wijesekera O, Delannoy M, Levchenko A, Quiñones-Hinojosa A. Pre-exposure of human adipose mesenchymal stem cells to soluble factors enhances their homing to brain cancer. Stem Cells Translational Medicine. 4: 239-51. PMID 25646527 DOI: 10.5966/Sctm.2014-0149  0.4
2014 Feng Y, Zhu M, Dangelmajer S, Lee YM, Wijesekera O, Castellanos CX, Denduluri A, Chaichana KL, Li Q, Zhang H, Levchenko A, Guerrero-Cazares H, Quiñones-Hinojosa A. Hypoxia-cultured human adipose-derived mesenchymal stem cells are non-oncogenic and have enhanced viability, motility, and tropism to brain cancer. Cell Death & Disease. 5: e1567. PMID 25501828 DOI: 10.1038/Cddis.2014.521  0.36
2014 Rhee A, Cheong R, Levchenko A. Noise decomposition of intracellular biochemical signaling networks using nonequivalent reporters. Proceedings of the National Academy of Sciences of the United States of America. 111: 17330-5. PMID 25404303 DOI: 10.1073/Pnas.1411932111  0.4
2014 Luo W, Lin B, Wang Y, Zhong J, O'Meally R, Cole RN, Pandey A, Levchenko A, Semenza GL. PHD3-mediated prolyl hydroxylation of nonmuscle actin impairs polymerization and cell motility. Molecular Biology of the Cell. 25: 2788-96. PMID 25079693 DOI: 10.1091/Mbc.E14-02-0775  0.92
2014 Abbadi S, Rodarte JJ, Abutaleb A, Lavell E, Smith CL, Ruff W, Schiller J, Olivi A, Levchenko A, Guerrero-Cazares H, Quinones-Hinojosa A. Glucose-6-phosphatase is a key metabolic regulator of glioblastoma invasion. Molecular Cancer Research : McR. 12: 1547-59. PMID 25001192 DOI: 10.1158/1541-7786.Mcr-14-0106-T  0.92
2014 Li Q, Wijesekera O, Salas SJ, Wang JY, Zhu M, Aprhys C, Chaichana KL, Chesler DA, Zhang H, Smith CL, Guerrero-Cazares H, Levchenko A, Quinones-Hinojosa A. Mesenchymal stem cells from human fat engineered to secrete BMP4 are nononcogenic, suppress brain cancer, and prolong survival. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. 20: 2375-87. PMID 24789034 DOI: 10.1158/1078-0432.Ccr-13-1415  0.92
2014 Kshitiz, Afzal J, Kim DH, Levchenko A. Concise review: Mechanotransduction via p190RhoGAP regulates a switch between cardiomyogenic and endothelial lineages in adult cardiac progenitors. Stem Cells (Dayton, Ohio). 32: 1999-2007. PMID 24710857 DOI: 10.1002/Stem.1700  1
2014 Ahn EH, Kim Y, Kshitiz, An SS, Afzal J, Lee S, Kwak M, Suh KY, Kim DH, Levchenko A. Spatial control of adult stem cell fate using nanotopographic cues. Biomaterials. 35: 2401-10. PMID 24388388 DOI: 10.1016/J.Biomaterials.2013.11.037  0.92
2013 Howard JD, Moriarty WF, Park J, Riedy K, Panova IP, Chung CH, Suh KY, Levchenko A, Alani RM. Notch signaling mediates melanoma-endothelial cell communication and melanoma cell migration. Pigment Cell & Melanoma Research. 26: 697-707. PMID 23773728 DOI: 10.1111/Pcmr.12131  0.92
2013 Kundu A, Micholt L, Friedrich S, Rand DR, Bartic C, Braeken D, Levchenko A. Superimposed topographic and chemical cues synergistically guide neurite outgrowth. Lab On a Chip. 13: 3070-81. PMID 23752939 DOI: 10.1039/C3Lc50174D  0.92
2013 Hubbi ME, Hu H, Kshitiz, Ahmed I, Levchenko A, Semenza GL. Chaperone-mediated autophagy targets hypoxia-inducible factor-1α (HIF-1α) for lysosomal degradation. The Journal of Biological Chemistry. 288: 10703-14. PMID 23457305 DOI: 10.1074/Jbc.M112.414771  0.88
2013 Suhail Y, Kshitiz, Lee J, Walker M, Kim DH, Brennan MD, Bader JS, Levchenko A. Modeling intercellular transfer of biomolecules through tunneling nanotubes. Bulletin of Mathematical Biology. 75: 1400-16. PMID 23417627 DOI: 10.1007/S11538-013-9819-4  0.92
2013 Hubbi ME, Kshitiz, Gilkes DM, Rey S, Wong CC, Luo W, Kim DH, Dang CV, Levchenko A, Semenza GL. A nontranscriptional role for HIF-1α as a direct inhibitor of DNA replication Science Signaling. 6. PMID 23405012 DOI: 10.1126/Scisignal.2003417  0.92
2013 Chaturvedi P, Gilkes DM, Wong CC, Luo W, Zhang H, Wei H, Takano N, Schito L, Levchenko A, Semenza GL. Hypoxia-inducible factor-dependent breast cancer-mesenchymal stem cell bidirectional signaling promotes metastasis. The Journal of Clinical Investigation. 123: 189-205. PMID 23318994 DOI: 10.1172/Jci64993  0.92
2013 Cromer Berman SM, Kshitiz, Wang CJ, Orukari I, Levchenko A, Bulte JW, Walczak P. Cell motility of neural stem cells is reduced after SPIO-labeling, which is mitigated after exocytosis. Magnetic Resonance in Medicine. 69: 255-62. PMID 22374813 DOI: 10.1002/Mrm.24216  0.88
2013 Chaturvedi P, Gilkes DM, Wong CCL, Kshitiz, Luo W, Zhang H, Wei H, Takano N, Schito L, Levchenko A, Semenza GL. Erratum: Hypoxia-inducible factor-dependent breast cancer-mesenchymal stem cell bidirectional signaling promotes metastasis (Journal of Clinical Investigation (2013) 123: 1 (189-205) DOI: 10.1172/JCI64993) Journal of Clinical Investigation. 123. DOI: 10.1172/Jci69244  0.88
2012 Lin B, Holmes WR, Wang CJ, Ueno T, Harwell A, Edelstein-Keshet L, Inoue T, Levchenko A. Synthetic spatially graded Rac activation drives cell polarization and movement. Proceedings of the National Academy of Sciences of the United States of America. 109: E3668-77. PMID 23185021 DOI: 10.1073/Pnas.1210295109  0.92
2012 Brennan MD, Cheong R, Levchenko A. Systems biology. How information theory handles cell signaling and uncertainty. Science (New York, N.Y.). 338: 334-5. PMID 23087235 DOI: 10.1126/Science.1227946  0.92
2012 Kshitiz, Park J, Kim P, Helen W, Engler AJ, Levchenko A, Kim DH. Control of stem cell fate and function by engineering physical microenvironments. Integrative Biology : Quantitative Biosciences From Nano to Macro. 4: 1008-18. PMID 23077731 DOI: 10.1039/C2Ib20080E  0.92
2012 Gorelik M, Orukari I, Wang J, Galpoththawela S, Kim H, Levy M, Gilad AA, Bar-Shir A, Kerr DA, Levchenko A, Bulte JW, Walczak P. Use of MR cell tracking to evaluate targeting of glial precursor cells to inflammatory tissue by exploiting the very late antigen-4 docking receptor. Radiology. 265: 175-85. PMID 22923719 DOI: 10.1148/Radiol.12112212  0.92
2012 Kim DH, Kshitiz, Smith RR, Kim P, Ahn EH, Kim HN, Marbán E, Suh KY, Levchenko A. Nanopatterned cardiac cell patches promote stem cell niche formation and myocardial regeneration. Integrative Biology : Quantitative Biosciences From Nano to Macro. 4: 1019-33. PMID 22890784 DOI: 10.1039/C2Ib20067H  0.92
2012 Rhee A, Cheong R, Levchenko A. The application of information theory to biochemical signaling systems. Physical Biology. 9: 045011. PMID 22872091 DOI: 10.1088/1478-3975/9/4/045011  0.4
2012 Gelin-Licht R, Paliwal S, Conlon P, Levchenko A, Gerst JE. Scp160-dependent mRNA trafficking mediates pheromone gradient sensing and chemotropism in yeast. Cell Reports. 1: 483-94. PMID 22832273 DOI: 10.1016/J.Celrep.2012.03.004  0.92
2012 Holmes WR, Lin B, Levchenko A, Edelstein-Keshet L. Modelling cell polarization driven by synthetic spatially graded Rac activation. Plos Computational Biology. 8: e1002366. PMID 22737059 DOI: 10.1371/Journal.Pcbi.1002366  0.92
2012 Kshitiz, Hubbi ME, Ahn EH, Downey J, Afzal J, Kim DH, Rey S, Chang C, Kundu A, Semenza GL, Abraham RM, Levchenko A. Matrix rigidity controls endothelial differentiation and morphogenesis of cardiac precursors. Science Signaling. 5: ra41. PMID 22669846 DOI: 10.1126/Scisignal.2003002  0.92
2012 Garzon-Muvdi T, Schiapparelli P, ap Rhys C, Guerrero-Cazares H, Smith C, Kim DH, Kone L, Farber H, Lee DY, An SS, Levchenko A, Quiñones-Hinojosa A. Regulation of brain tumor dispersal by NKCC1 through a novel role in focal adhesion regulation. Plos Biology. 10: e1001320. PMID 22570591 DOI: 10.1371/Journal.Pbio.1001320  0.92
2012 Kim DH, Provenzano PP, Smith CL, Levchenko A. Matrix nanotopography as a regulator of cell function. The Journal of Cell Biology. 197: 351-60. PMID 22547406 DOI: 10.1083/Jcb.201108062  1
2012 Bankoti R, Gupta K, Levchenko A, Stäger S. Marginal zone B cells regulate antigen-specific T cell responses during infection. Journal of Immunology (Baltimore, Md. : 1950). 188: 3961-71. PMID 22412197 DOI: 10.4049/Jimmunol.1102880  0.48
2012 Wang CJ, Bergmann A, Lin B, Kim K, Levchenko A. Diverse sensitivity thresholds in dynamic signaling responses by social amoebae. Science Signaling. 5: ra17. PMID 22375055 DOI: 10.1126/Scisignal.2002449  0.6
2012 Vanaja KG, Feinberg AP, Levchenko A. Stem cell differentiation as a renewal-reward process: predictions and validation in the colonic crypt. Advances in Experimental Medicine and Biology. 736: 199-209. PMID 22161330 DOI: 10.1007/978-1-4419-7210-1_11  0.92
2012 Park J, Kim HN, Kim DH, Levchenko A, Suh KY. Quantitative analysis of the combined effect of substrate rigidity and topographic guidance on cell morphology. Ieee Transactions On Nanobioscience. 11: 28-36. PMID 21908261 DOI: 10.1109/Tnb.2011.2165728  1
2012 Kshitiz, Hubbi ME, Ahn EH, Downey J, Afzal J, Kim DH, Rey S, Chang C, Kundu A, Semenza GL, Abraham RM, Levchenko A. Matrix rigidity controls endothelial differentiation and morphogenesis of cardiac precursors (Science Signaling (2012) 5) Science Signaling. 5. DOI: 10.1126/Scisignal.5245Er6  0.92
2011 Cheong R, Rhee A, Wang CJ, Nemenman I, Levchenko A. Information transduction capacity of noisy biochemical signaling networks. Science (New York, N.Y.). 334: 354-8. PMID 21921160 DOI: 10.1126/Science.1204553  0.6
2011 Kshitiz, Kim DH, Beebe DJ, Levchenko A. Micro- and nanoengineering for stem cell biology: the promise with a caution. Trends in Biotechnology. 29: 399-408. PMID 21549437 DOI: 10.1016/J.Tibtech.2011.03.006  0.92
2011 Hur EM, Yang IH, Kim DH, Byun J, Saijilafu, Xu WL, Nicovich PR, Cheong R, Levchenko A, Thakor N, Zhou FQ. Engineering neuronal growth cones to promote axon regeneration over inhibitory molecules. Proceedings of the National Academy of Sciences of the United States of America. 108: 5057-62. PMID 21383151 DOI: 10.1073/Pnas.1011258108  0.92
2011 Stine MJ, Wang CJ, Moriarty WF, Ryu B, Cheong R, Westra WH, Levchenko A, Alani RM. Integration of genotypic and phenotypic screening reveals molecular mediators of melanoma-stromal interaction. Cancer Research. 71: 2433-44. PMID 21324919 DOI: 10.1158/0008-5472.Can-10-1875  0.6
2011 Ni Q, Ganesan A, Aye-Han NN, Gao X, Allen MD, Levchenko A, Zhang J. Signaling diversity of PKA achieved via a Ca2+-cAMP-PKA oscillatory circuit. Nature Chemical Biology. 7: 34-40. PMID 21102470 DOI: 10.1038/Nchembio.478  0.92
2010 Cheong R, Paliwal S, Levchenko A. High-content screening in microfluidic devices. Expert Opinion On Drug Discovery. 5: 715-20. PMID 21852997 DOI: 10.1517/17460441.2010.495116  0.92
2010 Cheong R, Levchenko A. Oscillatory signaling processes: the how, the why and the where. Current Opinion in Genetics & Development. 20: 665-9. PMID 20971631 DOI: 10.1016/J.Gde.2010.08.007  0.4
2010 Compani B, Su T, Chang I, Cheng J, Shah KH, Whisenant T, Dou Y, Bergmann A, Cheong R, Wold B, Bardwell L, Levchenko A, Baldi P, Mjolsness E. A scalable and integrative system for pathway bioinformatics and systems biology. Advances in Experimental Medicine and Biology. 680: 523-34. PMID 20865537 DOI: 10.1007/978-1-4419-5913-3_58  0.92
2010 Cheong R, Paliwal S, Levchenko A. Models at the single cell level. Wiley Interdisciplinary Reviews. Systems Biology and Medicine. 2: 34-48. PMID 20836009 DOI: 10.1002/Wsbm.49  0.92
2010 Kim DH, Lee H, Lee YK, Nam JM, Levchenko A. Biomimetic nanopatterns as enabling tools for analysis and control of live cells. Advanced Materials (Deerfield Beach, Fla.). 22: 4551-66. PMID 20803528 DOI: 10.1002/Adma.201000468  0.92
2010 Yin Z, Tao SC, Cheong R, Zhu H, Levchenko A. An integrated micro-electro-fluidic and protein arraying system for parallel analysis of cell responses to controlled microenvironments. Integrative Biology : Quantitative Biosciences From Nano to Macro. 2: 416-23. PMID 20714638 DOI: 10.1039/C0Ib00017E  0.4
2010 You MH, Kwak MK, Kim DH, Kim K, Levchenko A, Kim DY, Suh KY. Synergistically enhanced osteogenic differentiation of human mesenchymal stem cells by culture on nanostructured surfaces with induction media. Biomacromolecules. 11: 1856-62. PMID 20568737 DOI: 10.1021/Bm100374N  1
2010 Gupta K, Kim DH, Ellison D, Smith C, Kundu A, Tuan J, Suh KY, Levchenko A. Lab-on-a-chip devices as an emerging platform for stem cell biology. Lab On a Chip. 10: 2019-31. PMID 20556297 DOI: 10.1039/C004689B  1
2010 Fan D, Yin Z, Cheong R, Zhu FQ, Cammarata RC, Chien CL, Levchenko A. Subcellular-resolution delivery of a cytokine through precisely manipulated nanowires. Nature Nanotechnology. 5: 545-51. PMID 20543835 DOI: 10.1038/Nnano.2010.104  0.92
2010 Park J, Kim DH, Kim G, Kim Y, Choi E, Levchenko A. Simple haptotactic gradient generation within a triangular microfluidic channel. Lab On a Chip. 10: 2130-8. PMID 20532357 DOI: 10.1039/B924222H  1
2010 Fosbrink M, Aye-Han NN, Cheong R, Levchenko A, Zhang J. Visualization of JNK activity dynamics with a genetically encoded fluorescent biosensor. Proceedings of the National Academy of Sciences of the United States of America. 107: 5459-64. PMID 20212108 DOI: 10.1073/Pnas.0909671107  0.92
2010 Kim DH, Lipke EA, Kim P, Cheong R, Thompson S, Delannoy M, Suh KY, Tung L, Levchenko A. Nanoscale cues regulate the structure and function of macroscopic cardiac tissue constructs. Proceedings of the National Academy of Sciences of the United States of America. 107: 565-70. PMID 20018748 DOI: 10.1073/Pnas.0906504107  1
2009 Kim DH, Seo CH, Han K, Kwon KW, Levchenko A, Suh KY. Guided Cell Migration on Microtextured Substrates with Variable Local Density and Anisotropy. Advanced Functional Materials. 19: 1579-1586. PMID 20046799 DOI: 10.1002/Adfm.200990041  1
2009 Rey S, Lee K, Wang CJ, Gupta K, Chen S, McMillan A, Bhise N, Levchenko A, Semenza GL. Synergistic effect of HIF-1alpha gene therapy and HIF-1-activated bone marrow-derived angiogenic cells in a mouse model of limb ischemia. Proceedings of the National Academy of Sciences of the United States of America. 106: 20399-404. PMID 19948968 DOI: 10.1073/Pnas.0911921106  0.92
2009 Kim DH, Han K, Gupta K, Kwon KW, Suh KY, Levchenko A. Mechanosensitivity of fibroblast cell shape and movement to anisotropic substratum topography gradients. Biomaterials. 30: 5433-44. PMID 19595452 DOI: 10.1016/J.Biomaterials.2009.06.042  1
2009 Cheong R, Wang CJ, Levchenko A. Using a microfluidic device for high-content analysis of cell signaling. Science Signaling. 2: pl2. PMID 19531802 DOI: 10.1126/Scisignal.275Pl2  0.6
2009 Kim DH, Wong PK, Park J, Levchenko A, Sun Y. Microengineered platforms for cell mechanobiology. Annual Review of Biomedical Engineering. 11: 203-33. PMID 19400708 DOI: 10.1146/Annurev-Bioeng-061008-124915  1
2009 Wang CJ, Levchenko A. Microfluidics technology for systems biology research. Methods in Molecular Biology (Clifton, N.J.). 500: 203-19. PMID 19399428 DOI: 10.1007/978-1-59745-525-1_7  0.6
2009 Polinkovsky M, Gutierrez E, Levchenko A, Groisman A. Fine temporal control of the medium gas content and acidity and on-chip generation of series of oxygen concentrations for cell cultures. Lab On a Chip. 9: 1073-84. PMID 19350089 DOI: 10.1039/B816191G  0.92
2009 Niu X, Gupta K, Yang JT, Shamblott MJ, Levchenko A. Physical transfer of membrane and cytoplasmic components as a general mechanism of cell-cell communication. Journal of Cell Science. 122: 600-10. PMID 19208767 DOI: 10.1242/Jcs.031427  0.92
2009 Cheong R, Wang CJ, Levchenko A. High content cell screening in a microfluidic device. Molecular & Cellular Proteomics : McP. 8: 433-42. PMID 18953019 DOI: 10.1074/Mcp.M800291-Mcp200  0.6
2009 Kim DH, Seo CH, Han K, Kwon KW, Levchenko A, Suh KY. Guided cell migration on microtextured substrates with variable local density and anisotropy Advanced Functional Materials. 19: 1579-1586. DOI: 10.1002/adfm.200801174  0.92
2008 Paliwal S, Wang CJ, Levchenko A. Pulsing cells: how fast is too fast? Hfsp Journal. 2: 251-6. PMID 19404435 DOI: 10.2976/1.2969901  0.92
2008 Yin Z, Noren D, Wang CJ, Hang R, Levchenko A. Analysis of pairwise cell interactions using an integrated dielectrophoretic-microfluidic system. Molecular Systems Biology. 4: 232. PMID 19096359 DOI: 10.1038/Msb.2008.69  0.6
2008 Hilioti Z, Sabbagh W, Paliwal S, Bergmann A, Goncalves MD, Bardwell L, Levchenko A. Oscillatory phosphorylation of yeast Fus3 MAP kinase controls periodic gene expression and morphogenesis. Current Biology : Cb. 18: 1700-6. PMID 18976914 DOI: 10.1016/J.Cub.2008.09.027  0.92
2008 Gupta K, Sehgal V, Levchenko A. A method for probabilistic mapping between protein structure and function taxonomies through cross training. Bmc Structural Biology. 8: 40. PMID 18834528 DOI: 10.1186/1472-6807-8-40  0.48
2008 Cheong R, Hoffmann A, Levchenko A. Understanding NF-kappaB signaling via mathematical modeling. Molecular Systems Biology. 4: 192. PMID 18463616 DOI: 10.1038/Msb.2008.30  0.4
2008 Cheong R, Levchenko A. Wires in the soup: quantitative models of cell signaling. Trends in Cell Biology. 18: 112-8. PMID 18291655 DOI: 10.1016/J.Tcb.2008.01.005  0.4
2008 Joanne Wang C, Li X, Lin B, Shim S, Ming GL, Levchenko A. A microfluidics-based turning assay reveals complex growth cone responses to integrated gradients of substrate-bound ECM molecules and diffusible guidance cues. Lab On a Chip. 8: 227-37. PMID 18231660 DOI: 10.1039/B713945D  0.92
2007 Kaneda A, Wang CJ, Cheong R, Timp W, Onyango P, Wen B, Iacobuzio-Donahue CA, Ohlsson R, Andraos R, Pearson MA, Sharov AA, Longo DL, Ko MS, Levchenko A, Feinberg AP. Enhanced sensitivity to IGF-II signaling links loss of imprinting of IGF2 to increased cell proliferation and tumor risk. Proceedings of the National Academy of Sciences of the United States of America. 104: 20926-31. PMID 18087038 DOI: 10.1073/Pnas.0710359105  0.92
2007 Socolovsky M, Murrell M, Liu Y, Pop R, Porpiglia E, Levchenko A. Negative autoregulation by FAS mediates robust fetal erythropoiesis. Plos Biology. 5: e252. PMID 17896863 DOI: 10.1371/Journal.Pbio.0050252  0.92
2007 O'Dea EL, Barken D, Peralta RQ, Tran KT, Werner SL, Kearns JD, Levchenko A, Hoffmann A. A homeostatic model of IkappaB metabolism to control constitutive NF-kappaB activity. Molecular Systems Biology. 3: 111. PMID 17486138 DOI: 10.1038/Msb4100148  0.92
2007 Paliwal S, Iglesias PA, Campbell K, Hilioti Z, Groisman A, Levchenko A. MAPK-mediated bimodal gene expression and adaptive gradient sensing in yeast. Nature. 446: 46-51. PMID 17310144 DOI: 10.1038/Nature05561  0.92
2006 Zhang NN, Dudgeon DD, Paliwal S, Levchenko A, Grote E, Cunningham KW. Multiple signaling pathways regulate yeast cell death during the response to mating pheromones. Molecular Biology of the Cell. 17: 3409-22. PMID 16738305 DOI: 10.1091/Mbc.E06-03-0177  0.92
2006 Cheong R, Bergmann A, Werner SL, Regal J, Hoffmann A, Levchenko A. Transient IkappaB kinase activity mediates temporal NF-kappaB dynamics in response to a wide range of tumor necrosis factor-alpha doses. The Journal of Biological Chemistry. 281: 2945-50. PMID 16321974 DOI: 10.1074/Jbc.M510085200  0.92
2006 Cheong R, Levchenko A. Transcription Factor NF-κ B: Function, Structure, Regulation, Pathways, and Applications Reviews in Cell Biology and Molecular Medicine. DOI: 10.1002/3527600906.Mcb.200500006  0.4
2005 Barken D, Wang CJ, Kearns J, Cheong R, Hoffmann A, Levchenko A. Comment on "Oscillations in NF-kappaB signaling control the dynamics of gene expression". Science (New York, N.Y.). 308: 52; author reply 52. PMID 15802586 DOI: 10.1126/Science.1107904  0.92
2005 Levchenko A, Mehta BM, Niu X, Kang G, Villafania L, Way D, Polycarpe D, Sadelain M, Larson SM. Intercellular transfer of P-glycoprotein mediates acquired multidrug resistance in tumor cells. Proceedings of the National Academy of Sciences of the United States of America. 102: 1933-8. PMID 15671173 DOI: 10.1073/Pnas.0401851102  0.92
2004 Levchenko A, Bruck J, Sternberg PW. Regulatory modules that generate biphasic signal response in biological systems. Systems Biology. 1: 139-48. PMID 17052124 DOI: 10.1049/sb:20045014  0.92
2004 Murrell MP, Yarema KJ, Levchenko A. The systems biology of glycosylation. Chembiochem : a European Journal of Chemical Biology. 5: 1334-47. PMID 15457533 DOI: 10.1002/Cbic.200400143  0.92
2004 Hilioti Z, Gallagher DA, Low-Nam ST, Ramaswamy P, Gajer P, Kingsbury TJ, Birchwood CJ, Levchenko A, Cunningham KW. GSK-3 kinases enhance calcineurin signaling by phosphorylation of RCNs. Genes & Development. 18: 35-47. PMID 14701880 DOI: 10.1101/Gad.1159204  0.92
2004 Paliwal S, Ma L, Krishnan J, Levchenko A, Iglesias PA. Responding to directional cues: A tale of two cells Ieee Control Systems Magazine. 24: 77-90. DOI: 10.1109/Mcs.2004.1316655  0.92
2003 Shapiro BE, Levchenko A, Meyerowitz EM, Wold BJ, Mjolsness ED. Cellerator: extending a computer algebra system to include biochemical arrows for signal transduction simulations. Bioinformatics (Oxford, England). 19: 677-8. PMID 12651737 DOI: 10.1093/Bioinformatics/Btg042  0.92
2002 Hoffmann A, Levchenko A, Scott ML, Baltimore D. The IkappaB-NF-kappaB signaling module: temporal control and selective gene activation. Science (New York, N.Y.). 298: 1241-5. PMID 12424381 DOI: 10.1126/Science.1071914  0.92
2000 Levchenko A, Bruck J, Sternberg PW. Scaffold proteins may biphasically affect the levels of mitogen-activated protein kinase signaling and reduce its threshold properties. Proceedings of the National Academy of Sciences of the United States of America. 97: 5818-23. PMID 10823939 DOI: 10.1073/Pnas.97.11.5818  0.92
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