Maria Chikina, Ph.D.

Affiliations: 
2011 Princeton University, Princeton, NJ 
Area:
Bioinformatics Biology, Computer Science, Molecular Biology
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"Maria Chikina"

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Olga G. Troyanskaya grad student 2011 Princeton
 (Devising effective similarity measures and learning algorithms for the study of metazoan gene expression.)
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Publications

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Choi SG, Wang Q, Jia J, et al. (2016) Characterization of gonadotrope secretoproteome identifies neurosecretory protein VGF-derived peptide suppression of follicle-stimulating hormone gene expression. The Journal of Biological Chemistry
Aghaeepour N, Chattopadhyay P, Chikina M, et al. (2015) A benchmark for evaluation of algorithms for identification of cellular correlates of clinical outcomes. Cytometry. Part a : the Journal of the International Society For Analytical Cytology
Hartmann BM, Thakar J, Albrecht RA, et al. (2015) Human Dendritic Cell Response Signatures Distinguish 1918, Pandemic, and Seasonal H1N1 Influenza Viruses. Journal of Virology. 89: 10190-205
Chikina MD, Gerald CP, Li X, et al. (2015) Low-variance RNAs identify Parkinson's disease molecular signature in blood. Movement Disorders : Official Journal of the Movement Disorder Society. 30: 813-21
Chikina M, Zaslavsky E, Sealfon SC. (2015) CellCODE: a robust latent variable approach to differential expression analysis for heterogeneous cell populations. Bioinformatics (Oxford, England). 31: 1584-91
Badgeley MA, Sealfon SC, Chikina MD. (2015) Hybrid Bayesian-rank integration approach improves the predictive power of genomic dataset aggregation. Bioinformatics (Oxford, England). 31: 209-15
Chikina MD, Sealfon SC. (2014) Increasing consistency of disease biomarker prediction across datasets. Plos One. 9: e91272
Wang Q, Chikina MD, Pincas H, et al. (2014) Homer1 alternative splicing is regulated by gonadotropin-releasing hormone and modulates gonadotropin gene expression. Molecular and Cellular Biology. 34: 1747-56
Aghaeepour N, Finak G, et al. (2013) Critical assessment of automated flow cytometry data analysis techniques. Nature Methods. 10: 228-38
Wang Q, Chikina M, Zaslavsky E, et al. (2013) β-catenin regulates GnRH-induced FSHβ gene expression. Molecular Endocrinology (Baltimore, Md.). 27: 224-37
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