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Robert F. Murphy, Ph.D. - Publications

Affiliations: 
2002 Northwestern University, Evanston, IL 
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Year Citation  Score
2020 Brice J, Sylla M, Desire N, Sayon S, Telly F, Bocar-Fofana D, Murphy R, Peytavin G, Diallo S, Nastouli E, Calvez V, Marcelin AG, Issiaka Maiga A, Lambert-Niclot S. Characterization of drug resistance and the defective HIV reservoir in virally suppressed vertically infected children in Mali. The Journal of Antimicrobial Chemotherapy. PMID 32073629 DOI: 10.1093/Jac/Dkaa002  0.357
2020 Adeola J, Badejo OA, Ahonkhai A, Okonkwo P, Aboh Akande P, Evans CT, McHugh M, Pierce L, Ahmed I, Jolayemi T, Ladi Akinyemi B, Onwuatuelo I, Murphy R, Kyriacou D, Musa J, et al. Effect of Baseline Symptom Manifestations on Retention in Care and Treatment among HIV-Infected Patients in Nigeria. Journal of the International Association of Providers of Aids Care. 19: 2325958220903575. PMID 32027211 DOI: 10.1177/2325958220903575  0.36
2019 Jary A, Dienta S, Leducq V, Le Hingrat Q, Cisse M, Diarra AB, Fofana DB, Ba A, Baby M, Achenbach CJ, Murphy R, Calvez V, Marcelin AG, Maiga AI. Seroprevalence and risk factors for HIV, HCV, HBV and syphilis among blood donors in Mali. Bmc Infectious Diseases. 19: 1064. PMID 31856758 DOI: 10.1186/S12879-019-4699-3  0.329
2019 Grant JL, Agaba P, Ugoagwu P, Muazu A, Okpokwu J, Akpa S, Machenry S, Imade G, Agbaji O, Thio CL, Murphy R, Hawkins C. Changes in liver stiffness after ART initiation in HIV-infected Nigerian adults with and without chronic HBV. The Journal of Antimicrobial Chemotherapy. 74: 2003-2008. PMID 31225612 DOI: 10.1093/Jac/Dkz145  0.367
2019 Christian B, Fabian E, Macha I, Mpangala S, Thio CL, Ulenga N, Mugusi F, Ammerman LR, Fawzi W, Green R, Murphy R, Hawkins C. Hepatitis B virus coinfection is associated with high early mortality in HIV-infected Tanzanians on antiretroviral therapy. Aids (London, England). 33: 465-473. PMID 30702515 DOI: 10.1097/Qad.0000000000002073  0.378
2018 Togo J, Maiga AI, Sylla M, Kone B, Dolo O, Traore FT, Sangare SA, Maiga M, Diallo S, Murphy R, Calvez V, Marcelin AG. Evaluation of Two HIV Rapid Diagnostic Tests in a Context of Strains' Genetic Diversity in Mali. Aids Research and Human Retroviruses. PMID 30560678 DOI: 10.1089/Aid.2017.0296  0.355
2018 Robertson KR, Jiang H, Kumwenda J, Supparatpinyo K, Marra CM, Berzins B, Hakim J, Sacktor N, Campbell TB, Schouten J, Mollan K, Tripathy S, Kumarasamy N, La Rosa A, Santos B, ... ... Murphy R, et al. HIV Associated Neurocognitive Impairment in Diverse Resource Limited Settings. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. PMID 30219843 DOI: 10.1093/Cid/Ciy767  0.386
2017 Hawkins C, Christian B, Fabian E, Macha I, Gawile C, Mpangala S, Ulenga N, Thio CL, Ammerman LR, Mugusi F, Fawzi W, Green R, Murphy R. Brief Report: HIV/HBV Coinfection is a Significant Risk Factor for Liver Fibrosis in Tanzanian HIV-Infected Adults. Journal of Acquired Immune Deficiency Syndromes (1999). 76: 298-302. PMID 29016448 DOI: 10.1097/Qai.0000000000001491  0.37
2017 Steens JM, Scherrer D, Gineste P, Barrett PN, Kuanchai S, Winai R, Ruxrungtham K, Tazi J, Murphy R, Ehrlich H. Safety, Pharmacokinetics and_Antiviral Activity of a Novel HIV Antiviral, ABX464, in Treatment- Naïve HIV Infected Subjects: a Phase II Randomized, Controlled Study. Antimicrobial Agents and Chemotherapy. PMID 28507108 DOI: 10.1128/Aac.00545-17  0.384
2017 Grant J, Agbaji O, Kramvis A, Yousif M, Auwal M, Penugonda S, Ugoagwu P, Murphy R, Hawkins C. Hepatitis B Virus Sequencing and Liver Fibrosis Evaluation in HIV/HBV Co-infected Nigerians. Tropical Medicine & International Health : Tm & Ih. PMID 28376292 DOI: 10.1111/Tmi.12873  0.316
2016 Brice J, Sylla M, Sayon S, Telly F, Bocar-Fofana D, Murphy R, Lambert-Niclot S, Todesco E, Grude M, Barin F, Diallo S, Pillay D, Derache A, Calvez V, Marcelin AG, et al. Qualitative and quantitative HIV antibodies and viral reservoir size characterization in vertically infected children with virological suppression. The Journal of Antimicrobial Chemotherapy. PMID 28039275 DOI: 10.1093/Jac/Dkw537  0.361
2016 Scherrer D, Steens J, Kuanchai S, Winai R, Ruxrungtham K, Rouzier R, Tazi J, Gineste P, Ehrlich H, Murphy R. P3 Early evidence of antiviral activity and safety of ABX464 in HIV treatment-naïve patients Journal of Virus Eradication. 2: 4-5. DOI: 10.1016/S2055-6640(20)31090-6  0.38
2013 Brown TT, Chen Y, Currier JS, Ribaudo HJ, Rothenberg J, Dubé MP, Murphy R, Stein JH, McComsey GA. Body composition, soluble markers of inflammation, and bone mineral density in antiretroviral therapy-naive HIV-1-infected individuals. Journal of Acquired Immune Deficiency Syndromes (1999). 63: 323-30. PMID 23591634 DOI: 10.1097/Qai.0B013E318295Eb1D  0.356
2013 Agbaji O, Thio CL, Meloni S, Graham C, Muazu M, Nimzing L, Idoko J, Sankalé JL, Ekong E, Murphy R, Kanki P, Hawkins C. Impact of hepatitis C virus on HIV response to antiretroviral therapy in Nigeria. Journal of Acquired Immune Deficiency Syndromes (1999). 62: 204-7. PMID 23196830 DOI: 10.1097/Qai.0B013E31827Ce536  0.362
2013 Adetunji AA, Achenbach C, Feinglass J, Darin KM, Scarsi KK, Ekong E, Taiwo BO, Adewole IF, Murphy R. Optimizing treatment switch for virologic failure during first-line antiretroviral therapy in resource-limited settings. Journal of the International Association of Providers of Aids Care. 12: 236-40. PMID 23128403 DOI: 10.1177/1545109712463733  0.325
2013 Ghosn J, Slama L, Chermak A, Houssaini A, Lambert-Niclot S, Schneider L, Fourn E, Duvivier C, Simon A, Courbon E, Murphy R, Flandre P, Peytavin G, Katlama C. Switching to darunavir/ritonavir 800/100 mg once-daily containing regimen maintains virological control in fully suppressed pre-treated patients infected with HIV-1. Journal of Medical Virology. 85: 8-15. PMID 23024008 DOI: 10.1002/Jmv.23404  0.384
2013 Maiga AI, Fofana DB, Maiga AC, Diallo F, Ait-Arkoub Z, Daou F, Cisse M, Sarro YDS, Oumar AA, Sylla A, Katlama C, Taiwo B, Murphy R, Tounkara A, Marcelin AG, et al. Transmitted antiretroviral drug resistance in newly HIV-Infected and untreated patients in ségou and bamako, mali Aids Research and Human Retroviruses. 29: 182-186. PMID 22823755 DOI: 10.1089/Aid.2012.0118  0.393
2012 Maiga AI, Fofana DB, Cisse M, Diallo F, Maiga MY, Traore HA, Maiga IA, Sylla A, Fofana D, Taiwo B, Murphy R, Katlama C, Tounkara A, Calvez V, Marcelin AG. Characterization of HIV-1 antiretroviral drug resistance after second-line treatment failure in Mali, a limited-resources setting Journal of Antimicrobial Chemotherapy. 67: 2943-2948. PMID 22888273 DOI: 10.1093/Jac/Dks310  0.377
2012 Robertson K, Jiang H, Kumwenda J, Supparatpinyo K, Evans S, Campbell TB, Price R, Tripathy S, Kumarasamy N, La Rosa A, Santos B, Silva MT, Montano S, Kanyama C, ... ... Murphy R, et al. Improved neuropsychological and neurological functioning across three antiretroviral regimens in diverse resource-limited settings: AIDS Clinical Trials Group study a5199, the International Neurological Study. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. 55: 868-76. PMID 22661489 DOI: 10.1093/Cid/Cis507  0.344
2012 Manion M, Rodriguez B, Medvik K, Hardy G, Harding CV, Schooley RT, Pollard R, Asmuth D, Murphy R, Barker E, Brady KE, Landay A, Funderburg N, Sieg SF, Lederman MM. Interferon-alpha administration enhances CD8+ T cell activation in HIV infection. Plos One. 7: e30306. PMID 22291932 DOI: 10.1371/Journal.Pone.0030306  0.349
2012 Agaba P, Sule H, Ojoh R, Saidu Z, Mua’zu M, Agbaji O, Idoko J, Ekong E, Murphy R, Kanki P. Poor immune status and systemic disease are independently associated with mortality in AIDS-related Kaposi Sarcoma in Nigeria Infectious Agents and Cancer. 7. DOI: 10.1186/1750-9378-7-S1-P7  0.327
2011 Robertson K, Kumwenda J, Supparatpinyo K, Jiang JH, Evans S, Campbell TB, Price RW, Murphy R, Hall C, Marra CM, Marcus C, Berzins B, Masih R, Santos B, Silva MT, et al. A multinational study of neurological performance in antiretroviral therapy-naïve HIV-1-infected persons in diverse resource-constrained settings. Journal of Neurovirology. 17: 438-47. PMID 21786076 DOI: 10.1007/S13365-011-0044-3  0.399
2011 Agaba PA, Digin E, Makai R, Apena L, Agbaji OO, Idoko JA, Murphy R, Kanki P. Clinical characteristics and predictors of mortality in hospitalized HIV-infected Nigerians. Journal of Infection in Developing Countries. 5: 377-82. PMID 21628815 DOI: 10.3855/Jidc.1096  0.371
2011 Otegbayo JA, Akingbola TS, Akinyemi JO, Adedapo KS, Odaibo GN, Óva YAA, Olaleye DO, Adewole IF, Murphy R, Kanki P. Immunovirological and Biochemical Changes in Nigerian Patients with Hepatitis B Coinfection on Antiretroviral Therapy World Journal of Aids. 1: 31-36. DOI: 10.4236/Wja.2011.12006  0.424
2010 Dominguez S, Ghosn J, Peytavin G, Guiguet M, Tubiana R, Valantin MA, Murphy R, Bricaire F, Benhamou Y, Katlama C. Impact of hepatitis C and liver fibrosis on antiretroviral plasma drug concentrations in HIV-HCV co-infected patients: The HEPADOSE study Journal of Antimicrobial Chemotherapy. 65: 2445-2449. PMID 20813809 DOI: 10.1093/Jac/Dkq320  0.388
2010 Taiwo B, Chaplin B, Penugonda S, Meloni S, Akanmu S, Gashau W, Idoko J, Adewole I, Murphy R, Kanki P. Suboptimal etravirine activity is common during failure of nevirapine-based combination antiretroviral therapy in a cohort infected with non-B subtype HIV-1. Current Hiv Research. 8: 194-8. PMID 20163340 DOI: 10.2174/157016210791111098  0.387
2009 Idoko J, Meloni S, Muazu M, Nimzing L, Badung B, Hawkins C, Sankalé JL, Ekong E, Murphy R, Kanki P, Thio CL. Impact of hepatitis B virus infection on human immunodeficiency virus response to antiretroviral therapy in Nigeria. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. 49: 1268-73. PMID 19772386 DOI: 10.1086/605675  0.302
2009 Katlama C, Murphy R. Emerging role of integrase inhibitors in the management of treatment-experienced patients with HIV infection. Therapeutics and Clinical Risk Management. 5: 331-340. PMID 19536321 DOI: 10.2147/Tcrm.S3137  0.41
2009 Soulié C, Tubiana R, Simon A, Lambert-Niclot S, Malet I, Canestri A, Brunet C, Murphy R, Katlama C, Calvez V, Marcelin AG. Presence of HIV-1 R5 viruses in cerebrospinal fluid even in patients harboring R5X4/X4 viruses in plasma. Journal of Acquired Immune Deficiency Syndromes. 51: 60-64. PMID 19390328 DOI: 10.1097/Qai.0B013E31819Fb903  0.346
2009 Tebas P, Zhang J, Hafner R, Tashima K, Shevitz A, Yarasheski K, Berzins B, Owens S, Forand J, Evans S, Murphy R. Peripheral and visceral fat changes following a treatment switch to a non-thymidine analogue or a nucleoside-sparing regimen in HIV-infected subjects with peripheral lipoatrophy: results of ACTG A5110. The Journal of Antimicrobial Chemotherapy. 63: 998-1005. PMID 19299471 DOI: 10.1093/Jac/Dkp071  0.33
2008 Calmy A, Pizzocolo C, Pizarro L, Brücker G, Murphy R, Katlama C, Autran B, Balkan S, Bonnet F, Bradol JH, Calvez V, Carcelain G, Clumeck N, Dabis F, Delaporte E, et al. The marriage of science and optimized HIV care in resource-limited settings Aids. 22: 2227-2230. PMID 18981761 DOI: 10.1097/Qad.0B013E32830F4C4D  0.364
2008 Amellal B, Murphy R, Maiga A, Brucker G, Katlama C, Calvez V, Marcelin AG. Stability of HIV RNA in plasma specimens stored at different temperatures Hiv Medicine. 9: 790-793. PMID 18754803 DOI: 10.1111/J.1468-1293.2008.00632.X  0.338
2008 Ojesina AI, Chaplin B, Sankalé JL, Murphy R, Idigbe E, Adewole I, Ekong E, Idoko J, Kanki PJ. Interplay of reverse transcriptase inhibitor therapy and gag p6 diversity in HIV type 1 subtype G and CRF02_AG. Aids Research and Human Retroviruses. 24: 1167-74. PMID 18729771 DOI: 10.1089/Aid.2007.0308  0.335
2008 Murphy R, Costagliola D. Increased cardiovascular risk in HIV infection: drugs, virus and immunity. Aids. 22: 1625-1627. PMID 18670222 DOI: 10.1097/Qad.0B013E328306A6Db  0.399
2008 Ait-Mohand H, Bonmarchand M, Guiguet M, Slama L, Marguet F, Behin A, Amellal B, Bennai Y, Peytavin G, Calvez V, Pialoux G, Murphy R, Katlama C. Viral efficacy maintained and safety parameters improved with a reduced dose of stavudine: a pilot study. Hiv Medicine. 9: 738-746. PMID 18651858 DOI: 10.1111/J.1468-1293.2008.00616.X  0.325
2007 Rachlis A, Clotet B, Baxter J, Murphy R, Lefebvre E. Safety, tolerability, and efficacy of darunavir (TMC114) with low-dose ritonavir in treatment-experienced, hepatitis B or C co-infected patients in POWER 1 and 3. Hiv Clinical Trials. 8: 213-220. PMID 17720661 DOI: 10.1310/Hct0804-213  0.343
2007 Taiwo BO, Murphy R. Transmitted Resistance: An Overview and Its Potential Relevance to the Management of HIV-Infected Persons in Resource-Limited Settings. Journal of the International Association of Physicians in Aids Care (Jiapac). 6: 188-197. PMID 17473177 DOI: 10.1177/1545109707300683  0.307
2006 Taiwo B, Murphy R. Outcomes for therapeutic vaccines trials. Current Opinion in Hiv and Aids. 1: 502-506. PMID 19372853 DOI: 10.1097/01.Coh.0000250321.50408.0A  0.33
2004 Autran B, Costagliola D, Murphy R, Katlama C. Evaluating therapeutic vaccines in patients infected with HIV. Expert Review of Vaccines. 3. PMID 15285715 DOI: 10.1586/14760584.3.4.S169  0.407
2004 Wood R, Phanuphak P, Cahn P, Pokrovskiy V, Rozenbaum W, Pantaleo G, Sension M, Murphy R, Mancini M, Kelleher T, Giordano M. Long-term efficacy and safety of atazanavir with stavudine and lamivudine in patients previously treated with nelfinavir or atazanavir. Journal of Acquired Immune Deficiency Syndromes (1999). 36: 684-92. PMID 15167287 DOI: 10.1097/00126334-200406010-00005  0.376
2002 Davidson M, Min YI, Holbrook JT, Van Natta ML, Murphy R, Jabs DA, Welch W, Meinert CL. Use of filgrastim as adjuvant therapy in patients with AIDS-related cytomegalovirus retinitis. Aids (London, England). 16: 757-65. PMID 11964532 DOI: 10.1097/00002030-200203290-00011  0.305
2002 Falloon J, Ait-Khaled M, Thomas DA, Brosgart CL, Eron Jr JJ, Feinberg J, Flanigan TP, Hammer SM, Kraus PW, Murphy R, Torres R, Masur H. HIV-1 genotype and phenotype correlate with virological response to abacavir, amprenavir and efavirenz in treatment-experienced patients. Aids (London, England). 16: 387-96. PMID 11834950 DOI: 10.1097/00002030-200202150-00010  0.401
2001 Tebas P, Henry K, Nease R, Murphy R, Phair J, Powderly WG. Timing of antiretroviral therapy. Use of Markov modeling and decision analysis to evaluate the long-term implications of therapy Aids. 15: 591-599. PMID 11316996 DOI: 10.1097/00002030-200103300-00008  0.342
2001 Katzenstein DA, Hughes MD, Albrecht M, Liou SH, Murphy R, Balfour H, Para M, Hammer S. Virologic and CD4 cell response to zidovudine or zidovudine and lamivudine following didanosine treatment of human immunodeficiency virus infection. Aids Research and Human Retroviruses. 17: 203-10. PMID 11177402 DOI: 10.1089/088922201750063115  0.399
2000 Albrecht MA, Hughes MD, Liou SH, Katzenstein DA, Murphy R, Balfour HH, Para MF, Valdez H, Hammer SM. Effect of lamivudine in HIV-infected persons with prior exposure to zidovudine/didanosine or zidovudine/zalcitabine. Aids Research and Human Retroviruses. 16: 1337-44. PMID 11018853 DOI: 10.1089/08892220050140883  0.393
2000 Jabs DA, Freeman WR, Jacobson M, Murphy R, Van Natta ML, Meinert CL. Long-term follow-up of patients with AIDS treated with parenteral cidofovir for cytomegalovirus retinitis: The HPMPC peripheral cytomegalovirus retinitis trial. The studies of ocular complications of AIDS research group in collaboration with the AIDS clinical trials group Aids. 14: 1571-1581. PMID 10983644 DOI: 10.1097/00002030-200007280-00013  0.317
2000 Katzenstein DA, Hughes H, Albrecht M, Hammer S, Para M, Murphy R, Valdez H, Haubrich R, Liou S. Virologic and CD4+ Cell Responses to New Nucleoside Regimens: Switching to Stavudine or Adding Lamivudine after Prolonged Zidovudine Treatment of Human Immunodeficiency Virus Infection Aids Research and Human Retroviruses. 16: 1031-1037. PMID 10933617 DOI: 10.1089/08892220050075282  0.397
1999 Kahn J, Lagakos S, Wulfsohn M, Cherng D, Miller M, Cherrington J, Hardy D, Beall G, Cooper R, Murphy R, Basgoz N, Ng E, Deeks S, Winslow D, Toole JJ, et al. Efficacy and safety of adefovir dipivoxil with antiretroviral therapy: a randomized controlled trial. Jama. 282: 2305-12. PMID 10612317 DOI: 10.1001/Jama.282.24.2305  0.383
1998 Mueller BU, Anderson BD, Farley MQ, Murphy R, Zuckerman J, Jarosinski P, Godwin K, McCully CL, Mitsuya H, Pizzo PA, Balis FM. Pharmacokinetics of the protease inhibitor KNI-272 in plasma and cerebrospinal fluid in nonhuman primates after intravenous dosing and in human immunodeficiency virus-infected children after intravenous and oral dosing. Antimicrobial Agents and Chemotherapy. 42: 1815-8. PMID 9661027 DOI: 10.1128/Aac.42.7.1815  0.339
1997 Beal JE, Olson R, Lefkowitz L, Laubenstein L, Bellman P, Yangco B, Morales JO, Murphy R, Powderly W, Plasse TF, Mosdell KW, Shepard KV. Long-term efficacy and safety of dronabinol for acquired immunodeficiency syndrome-associated anorexia. Journal of Pain and Symptom Management. 14: 7-14. PMID 9223837 DOI: 10.1016/S0885-3924(97)00038-9  0.308
1997 Spruance SL, Pavia AT, Mellors JW, Murphy R, Gathe J, Stool E, Jemsek JG, Dellamonica P, Cross A, Dunkle L. Clinical efficacy of monotherapy with stavudine compared with zidovudine in HIV-infected, zidovudine-experienced patients. A randomized, double- blind, controlled trial Annals of Internal Medicine. 126: 355-363. PMID 9054279 DOI: 10.7326/0003-4819-126-5-199703010-00003  0.422
1996 Wallace MR, Moss RB, Beecham HJ, Grace CJ, Hersh EM, Peterson E, Murphy R, Shepp DH, Siegal FP, Turner JL, Safrin S, Carlo DJ, Levine AM. Early clinical markers and CD4 percentage in subjects with human immunodeficiency virus infection. Journal of Acquired Immune Deficiency Syndromes and Human Retrovirology : Official Publication of the International Retrovirology Association. 12: 358-62. PMID 8673544 DOI: 10.1097/00042560-199608010-00005  0.371
1995 Park LP, Graham NMH, Jacobson LP, Murphy R, Besley D, Zucconi S, Muñoz A. Factors associated with changes in the use of antiretroviral therapy by a cohort of homosexual men infected with human immunodeficiency virus type 1 Clinical Infectious Diseases. 21: 930-937. PMID 8645842 DOI: 10.1093/Clinids/21.4.930  0.353
1995 Murphy R. Clinical aspects of human immunodeficiency virus disease: clinical rationale for treatment. The Journal of Infectious Diseases. 171. PMID 7861022 DOI: 10.1093/Infdis/171.Supplement_2.S81  0.347
1995 Havlir D, Cheeseman SH, Mclaughlin M, Murphy R, Erice A, Spector SA, Greenough TC, Sullivan JL, Hall D, Myers M, Lamson M, Richman DD. High-Dose Nevirapine: Safety, Pharmacokinetics, And Antiviral Effect In Patients With Human Immunodeficiency Virus Infection The Journal of Infectious Diseases. 171: 537-545. PMID 7533197 DOI: 10.1093/Infdis/171.3.537  0.318
1994 Weinberg DV, Murphy R, Naughton K. Combined daily therapy with intravenous ganciclovir and foscarnet for patients with recurrent cytomegalovirus retinitis. American Journal of Ophthalmology. 117: 776-82. PMID 8198162 DOI: 10.1016/S0002-9394(14)70322-8  0.301
1993 Wheat J, Hafner R, Wulfsohn M, Spencer P, Squires K, Powderly W, Wong B, Rinaldi M, Saag M, Hamill R, Murphy R, Connolly-Stringfield P, Briggs N, Owens S. Prevention of relapse of histoplasmosis with itraconazole in patients with the acquired immunodeficiency syndrome Annals of Internal Medicine. 118: 610-616. PMID 8383934 DOI: 10.7326/0003-4819-118-8-199304150-00006  0.301
1992 Hoover DR, Saah A, Bacellar H, Murphy R, Visscher B, Metz S, Anderson R, Kaslow RA. The progression of untreated HIV-1 infection prior to AIDS. American Journal of Public Health. 82: 1538-41. PMID 1359801 DOI: 10.2105/Ajph.82.11.1538  0.367
1991 Hoover DR, Graham NM, Bacellar H, Schrager LK, Kaslow R, Visscher B, Murphy R, Anderson R, Saah A. Epidemiologic patterns of upper respiratory illness and Pneumocystis carinii pneumonia in homosexual men. The American Review of Respiratory Disease. 144: 756-9. PMID 1928944 DOI: 10.1164/Ajrccm/144.4.756  0.341
1990 Landay A, Kessler HA, Benson CA, Pottage JC, Murphy R, Urbanski P, Kucik S, Phair J. Isolation of HIV-1 from monocytes of individuals negative by conventional culture. The Journal of Infectious Diseases. 161: 706-710. PMID 1969456 DOI: 10.1093/Infdis/161.4.706  0.345
Low-probability matches (unlikely to be authored by this person)
1993 Dieterich DT, Poles MA, Lew EA, Mendez PE, Murphy R, Addessi A, Holbrook JT, Naughton K, Friedberg DN. Concurrent use of ganciclovir and foscarnet to treat cytomegalovirus infection in AIDS patients. The Journal of Infectious Diseases. 167: 1184-8. PMID 8387563 DOI: 10.1093/Infdis/167.5.1184  0.299
2008 Soulié C, Malet I, Lambert-Niclot S, Tubiana R, Thévenin M, Simon A, Murphy R, Katlama C, Calvez V, Marcelin AG. Primary genotypic resistance of HIV-1 to CCR5 antagonists in CCR5 antagonist treatment-naive patients. Aids. 22: 2212-2214. PMID 18832886 DOI: 10.1097/Qad.0B013E328313Bf9C  0.296
2009 Wirden M, Tubiana R, Marguet F, Leroy I, Simon A, Bonmarchand M, Ait-Arkoub Z, Murphy R, Marcelin AG, Katlama C, Calvez V. Impact of Discrepancies between the Abbott RealTime and Cobas TaqMan Assays for Quantification of Human Immunodeficiency Virus Type 1 Group M Non-B Subtypes Journal of Clinical Microbiology. 47: 1543-1545. PMID 19297599 DOI: 10.1128/Jcm.02134-08  0.287
2012 Maiga AI, Penugonda S, Katile D, Diallo F, Fofana DB, Berzins B, Maiga MY, Sylla A, Traore HA, Marcelin AG, Calvez V, Tounkara A, Bellosillo N, Murphy R, Taiwo B. Connection domain mutations during antiretroviral treatment failure in Mali: frequencies and impact on reverse transcriptase inhibitor activity Journal of Acquired Immune Deficiency Syndromes (1999). 61: 293-296. PMID 22828721 DOI: 10.1097/Qai.0B013E31826A4B34  0.285
2007 Hawkins C, Achenbach C, Fryda W, Ngare D, Murphy R. Antiretroviral durability and tolerability in HIV-infected adults living in urban Kenya. Journal of Acquired Immune Deficiency Syndromes (1999). 45: 304-10. PMID 17414931 DOI: 10.1097/QAI.0b013e318050d66c  0.277
2013 Maiga M, Ammerman NC, Maiga MC, Tounkara A, Siddiqui S, Polis M, Murphy R, Bishai WR. Adjuvant host-directed therapy with types 3 and 5 but not type 4 phosphodiesterase inhibitors shortens the duration of tuberculosis treatment. The Journal of Infectious Diseases. 208: 512-9. PMID 23641020 DOI: 10.1093/Infdis/Jit187  0.273
1993 Pertel P, Hirschtick R, Phair J, Chmiel J, Poggensee I, Murphy R. Risk of Developing Cytomegalovirus Retinitis in Persons Infected With the Human Immunodeficiency Virus Retina-the Journal of Retinal and Vitreous Diseases. 13: 262-263. DOI: 10.1097/00006982-199313030-00016  0.272
1993 Grem JL, McAtee N, Balis F, Murphy R, Venzon D, Kramer B, Goldspiel B, Begley M, Allegra CJ. A phase II study of continuous infusion 5-fluorouracil and leucovorin with weekly cisplatin in metastatic colorectal carcinoma Cancer. 72: 663-668. PMID 8334622 DOI: 10.1002/1097-0142(19930801)72:3<663::Aid-Cncr2820720307>3.0.Co;2-V  0.271
2003 Murphy R, Gazzard B. Antiretroviral treatment guidelines. Aids. PMID 12870522 DOI: 10.1097/00002030-200306002-00001  0.266
2018 Egesie OJ, Agaba PA, Silas OA, Achenbach C, Zoakah A, Agbaji OO, Madaki JA, Okeke EN, Hou L, Sagay AS, Murphy R. Presentation and survival in patients with hematologic malignancies in Jos, Nigeria: A retrospective cohort analysis. Journal of Medicine in the Tropics. 20: 49-56. PMID 29963503 DOI: 10.4103/Jomt.Jomt_8_18  0.254
2012 Marcus L, Murphy R, Fox E, McCully C, Cruz R, Warren KE, Meyer T, McNiff E, Balis FM, Widemann BC. The plasma and cerebrospinal fluid pharmacokinetics of the platinum analog satraplatin after intravenous administration in non-human primates. Cancer Chemotherapy and Pharmacology. 69: 247-52. PMID 21706317 DOI: 10.1007/S00280-011-1659-Z  0.252
1988 Arndt CA, Balis FM, McCully CL, Jeffries SL, Doherty K, Murphy R, Poplack DG. Bioavailability of low-dose vs high-dose 6-mercaptopurine. Clinical Pharmacology and Therapeutics. 43: 588-91. PMID 3365920 DOI: 10.1038/Clpt.1988.78  0.249
2007 Landay A, da Silva BA, King MS, Albrecht M, Benson C, Eron J, Glesby M, Gulick R, Hicks C, Kessler H, Murphy R, Thompson M, White AC, Wolfe P, McMillan FI, et al. Evidence of ongoing immune reconstitution in subjects with sustained viral suppression following 6 years of lopinavir-ritonavir treatment. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. 44: 749-54. PMID 17278071 DOI: 10.1086/511681  0.247
2012 Katlama C, Murphy R. Dolutegravir for the treatment of HIV. Expert Opinion On Investigational Drugs. 21: 523-30. PMID 22380682 DOI: 10.1517/13543784.2012.661713  0.244
2015 Kelesidis T, Tran TT, Stein JH, Brown TT, Moser C, Ribaudo HJ, Dube MP, Murphy R, Yang OO, Currier JS, McComsey GA. Changes in Inflammation and Immune Activation With Atazanavir-, Raltegravir-, Darunavir-Based Initial Antiviral Therapy: ACTG 5260s. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. PMID 25904376 DOI: 10.1093/Cid/Civ327  0.243
2001 Servoss JC, Sherman KE, Robbins G, Liou S, Reisler R, Polsky B, Murphy R, Theodore D, Miskovsky E, Chung RT. Hepatoxicity in the U.S. Adult AIDS Clinical Trial Group Gastroenterology. 120. DOI: 10.1016/S0016-5085(08)80265-X  0.241
2016 Cadmus SI, Diarra B, Traore B, Maiga M, Siddiqui S, Tounkara A, Falodun O, Lawal W, Adewole IF, Murphy R, van Soolingen D, Taiwo B. Nontuberculous Mycobacteria Isolated from Tuberculosis Suspects in Ibadan, Nigeria. Journal of Pathogens. 2016: 6547363. PMID 27099795 DOI: 10.1155/2016/6547363  0.24
2009 Maïga AI, Malet I, Soulie C, Derache A, Koita V, Amellal B, Tchertanov L, Delelis O, Morand-Joubert L, Mouscadet JF, Murphy R, Cissé M, Katlama C, Calvez V, Marcelin AG. Genetic barriers for integrase inhibitor drug resistance in HIV type-1 B and CRF02_AG subtypes. Antiviral Therapy. 14: 123-9. PMID 19320246  0.239
2005 Blaney SM, Balis FM, Berg S, Arndt CA, Heideman R, Geyer JR, Packer R, Adamson PC, Jaeckle K, Klenke R, Aikin A, Murphy R, McCully C, Poplack DG. Intrathecal mafosfamide: a preclinical pharmacology and phase I trial. Journal of Clinical Oncology : Official Journal of the American Society of Clinical Oncology. 23: 1555-63. PMID 15735131 DOI: 10.1200/Jco.2005.06.053  0.227
2022 Hawkins C, Kang M, Bhattacharya D, Cloherty G, Kuhns M, Matining R, Thio C, Samaneka W, Chinula L, Mulinda N, Badal-Faesen S, Sugandhavesa P, Lama J, Gaseitsiwe S, Holzmayer V, ... ... Murphy R, et al. Hepatitis B surface antigen and Hepatitis B RNA changes in HIV/HBV Co-infected participants receiving HBV-active antiretroviral therapy for 144 weeks. Aids (London, England). PMID 35165216 DOI: 10.1097/QAD.0000000000003193  0.226
1997 Gilpin AMK, Lewis RA, Clogston P, Fainstein V, Gross R, Samo T, Tuttle C, Jabs DA, Apuzzo L, Bartlett J, Coleson L, Dunn JP, Eldred L, Feinberg J, Flynn T, ... ... Murphy R, et al. Foscarnet-ganciclovir cytomegalovirus retinitis trial: 5. Clinical features of cytomegalovirus retinitis at diagnosis American Journal of Ophthalmology. 124: 141-157. DOI: 10.1016/S0002-9394(14)70778-0  0.223
1974 Shepherd BA, Martan J, Murphy R. In Vitro Studies of Guinea Pig Spermatozoa in Rouleaux Biology of Reproduction. 11: 470-474. PMID 4457149 DOI: 10.1095/Biolreprod11.4.470  0.221
1997 Lewis RA, Clogston PS, Fainstein V, Gross R, Samo T, Tuttle C, Jabs DA, Apuzzo L, Bartlett J, Coleson LC, Dunn JP, Eldred L, Flynn T, King R, Leslie J, ... ... Murphy R, et al. Rhegmatogenous retinal detachment in patients with cytomegalovirus retinitis: The foscarnet-ganciclovir cytomegalovirus retinitis trial American Journal of Ophthalmology. 124: 61-70. DOI: 10.1016/S0002-9394(14)71645-9  0.22
2020 Dabitao D, Dembele M, Urbanowski M, Kone B, Wague M, Coulibaly N, Sarro YDS, Baya B, Goita D, Dao S, Belson M, Klein S, Achenbach C, Holl J, Diakite M, ... ... Murphy R, et al. Genetic variation in human IL10 proximal promoter and susceptibility to HIV-1 infection in Mali, West Africa. Aids Research and Human Retroviruses. PMID 33045845 DOI: 10.1089/AID.2020.0140  0.217
2018 B Cadmus SI, Falodun OI, Fagade OE, Murphy R, Taiwo B, Van Soolingen D. The problem of resistance in may be underestimated in Africa. International Journal of Mycobacteriology. 7: 148-151. PMID 29900891 DOI: 10.4103/Ijmy.Ijmy_29_18  0.216
2019 Carleton PF, Schachter S, Lash TB, Chen J, Merchak T, Brand O, Buchholz B, Gaydos C, Lam W, Manabe Y, Martin G, McFall S, McManus D, Murphy R, Parrish J. Point-of-Care Technology Research Network: An evolving model for collaborative translational research in biomedical engineering Current Opinion in Biomedical Engineering. 11: 145-148. DOI: 10.1016/J.Cobme.2019.10.011  0.212
2018 Joyce BT, Zheng Y, Nannini D, Zhang Z, Liu L, Gao T, Kocherginsky M, Murphy R, Yang H, Achenbach CJ, Roberts LR, Hoxha M, Shen J, Vokonas P, Schwartz J, et al. DNA Methylation of Telomere-Related Genes and Cancer Risk. Cancer Prevention Research (Philadelphia, Pa.). PMID 29895583 DOI: 10.1158/1940-6207.Capr-17-0413  0.208
2009 Katlama C, Tubiana R, Murphy R. Les nouvelles molécules anti-VIH : la place du raltégravir Antibiotiques. 11: 11-17. DOI: 10.1016/J.Antib.2008.12.001  0.206
2020 Diakite B, Kassogue Y, Dolo G, Kassogue O, Keita ML, Joyce B, Neuschler E, Wang J, Musa J, Traore CB, Kamate B, Dembele E, Nadifi S, Isichei M, Holl JL, ... Murphy R, et al. Association of PIN3 16-bp duplication polymorphism of TP53 with breast cancer risk in Mali and a meta-analysis. Bmc Medical Genetics. 21: 142. PMID 32620097 DOI: 10.1186/S12881-020-01072-4  0.202
2015 DeVito AK, Hennig N, Murphy R, Bentley S. The Postpartum Health Status of Women in an Urban Clinic in Santiago, Dominican Republic Annals of Global Health. 81: 109-110. DOI: 10.1016/J.Aogh.2015.02.752  0.198
2018 Joyce BT, Zheng Y, Zhang Z, Liu L, Kocherginsky M, Murphy R, Achenbach C, Musa J, Wehbe F, Just A, Shen J, Vokonas P, Schwartz J, Baccarelli A, Hou L. MicroRNA Processing Gene Methylation and Cancer Risk. Cancer Epidemiology, Biomarkers & Prevention : a Publication of the American Association For Cancer Research, Cosponsored by the American Society of Preventive Oncology. PMID 29475968 DOI: 10.1158/1055-9965.Epi-17-0849  0.192
2018 Akanbi MO, Carroll AJ, Achenbach C, O'Dwyer LC, Jordan N, Hitsman B, Bilaver LA, McHugh MC, Murphy R. The efficacy of smoking cessation interventions in low- and middle-income countries: A systematic review and meta-analysis. Addiction (Abingdon, England). PMID 30506845 DOI: 10.1111/Add.14518  0.192
2020 Ogunsola FT, Odukoya OO, Banigbe B, Caleb-Adepoju SO, Folarin O, Afolabi BB, Okubadejo NU, Adeyemo WL, Akanmu AS, Osuntoki A, Okonkwo P, Murphy R, Kanki P. A preprogram appraisal of factors influencing research productivity among faculty at college of medicine, University of Lagos. Annals of African Medicine. 19: 124-130. PMID 32499469 DOI: 10.4103/Aam.Aam_54_19  0.19
2016 Galvin S, Doobay-Persaud A, Peterson C, Young D, Murphy R, Cohen M. A new workforce for a new era: characteristics of Master of Science in Global Health students Annals of Global Health. 82: 356. DOI: 10.1016/J.Aogh.2016.04.070  0.187
2017 Neubauer LC, Doobay-Persaud A, Galvin S, Sheneman N, Murphy R. Developing and Refining the MSGH Degree Program: A Theory and Competency-Driven, Multi-Phase Curriculum Development and Alignment Process Annals of Global Health. 83: 121. DOI: 10.1016/J.Aogh.2017.03.269  0.184
2017 Doobay-Persaud A, Galvin S, Sheneman N, murphy R. Master of Science in Global Health Students: Who Are They and What Jobs Do They Want? Annals of Global Health. 83: 32-33. DOI: 10.1016/J.Aogh.2017.03.070  0.18
2023 Malonga GA, Maiga AI, Moudiongui Mboungou Malanda D, Saliou M, Malanda-Kiminou JP, Dolo O, Boumba ALM, Ba A, Murphy R, Peko JF, Marcelin AG, Calvez V, Marot S. Seroprevalence of Crimean-Congo hemorrhagic fever virus among people living with HIV in Brazzaville, Congo and among blood donors in Bamako, Mali. Ticks and Tick-Borne Diseases. 15: 102276. PMID 37967483 DOI: 10.1016/j.ttbdis.2023.102276  0.166
1983 McDermott BJ, Van den Berg HW, Martin WM, Murphy RF. Pharmacokinetic rationale for the interaction of 5-fluorouracil and misonidazole in humans British Journal of Cancer. 48: 705-710. PMID 6639859 DOI: 10.1038/bjc.1983.253  0.155
2023 Lane G, Zhou G, Hultquist JF, Simons LM, Redondo RL, Ozer EA, McCarthy DM, Ison MG, Achenbach CJ, Wang X, Wai CM, Wyatt E, Aalsburg A, Yang Q, Noto T, ... ... Murphy R, et al. Quantity of SARS-CoV-2 RNA copies exhaled per minute during natural breathing over the course of COVID-19 infection. Medrxiv : the Preprint Server For Health Sciences. PMID 37732212 DOI: 10.1101/2023.09.06.23295138  0.145
2023 Reddin C, Murphy R, Hanrahan C, Loughlin E, Ferguson J, Judge C, Waters R, Canavan M, Kenny RA, O'Donnell M. Randomised controlled trials of antihypertensive therapy: does exclusion of orthostatic hypotension alter treatment effect? A systematic review and meta-analysis. Age and Ageing. 52. PMID 37014001 DOI: 10.1093/ageing/afad044  0.145
2018 Oumar AA, Bagayoko-Maiga K, Bahachimi A, Maiga M, Cere MC, Diarra Z, Chatelut E, Sylla M, Murphy R, Dao S, Gandia P. Efavirenz and Lopinavir Levels in HIV-infected Women and their Nursing Infants, in Mali. The Journal of Pharmacology and Experimental Therapeutics. PMID 29986950 DOI: 10.1124/jpet.118.249938  0.138
2017 Murphy RF, Emans JB, Troy M, Miller PE, Hresko MT, Karlin LI, Hedequist DJ, Glotzbecker MP. Sagittal plane parameters in growing rod patients following final fusion. Journal of Pediatric Orthopedics. Part B. PMID 28328741 DOI: 10.1097/BPB.0000000000000446  0.122
1983 McDermott BJ, van den Berg HW, Murphy RF. Nonlinear pharmacokinetics for the elimination of 5-fluorouracil after intravenous administration in cancer patients. Cancer Chemotherapy and Pharmacology. 9: 173-8. PMID 7160054 DOI: 10.1007/BF00257748  0.121
2007 Hawkins C, Murphy R. Adherence to antiretroviral therapy in resource-limited settings: everything matters. Aids (London, England). 21: 1041-2. PMID 17457099 DOI: 10.1097/QAD.0b013e3281900eb9  0.121
2024 Dennehy K, Lynch A, Reddin C, Daly B, Dukelow T, Canavan M, Costello M, Murphy R. How comprehensive is our comprehensive geriatric assessment in clinical practice? An Irish perspective. European Geriatric Medicine. PMID 38647972 DOI: 10.1007/s41999-024-00973-4  0.12
2000 Bozsó Z, Tóth G, Murphy RF, Lovas S. Letters in Peptide Science. 7: 157-163. DOI: 10.1023/A:1008928404072  0.12
2015 Akshintala S, Marcus L, Warren KE, Murphy RF, Sissung TM, Srivastava A, Goodspeed WJ, Goodwin A, Brewer CC, Zalewski C, King KA, Kim A, Figg WD, Widemann BC. Phase 1 trial and pharmacokinetic study of the oral platinum analog satraplatin in children and young adults with refractory solid tumors including brain tumors. Pediatric Blood & Cancer. 62: 603-10. PMID 25556988 DOI: 10.1002/Pbc.25344  0.12
1980 Van Den Berg HW, Murphy RF, Kennedy DG. Rapid plasma clearance and reduced rate and extent of urinary elimination of parenterally administered methotrexate as a result of severe vomiting and diarrhoea. Cancer Chemotherapy and Pharmacology. 4: 47-8. PMID 7363401 DOI: 10.1007/BF00255458  0.117
1985 Muggia-Sullam M, Bower RH, Murphy RF, Joffe SN, Fischer JE. Postoperative enteral versus parenteral nutritional support in gastrointestinal surgery. A matched prospective study. American Journal of Surgery. 149: 106-12. PMID 3917621 DOI: 10.1016/S0002-9610(85)80018-0  0.113
2022 Murphy RF, Neel GB, Barfield WR, Anari JB, St Hilaire T, Thompson G, Emans J, Akbarnia B, Smith J, Mooney JF. Trends in the Utilization of Implants in Index Procedures for Early Onset Scoliosis From the Pediatric Spine Study Group. Journal of Pediatric Orthopedics. PMID 35941094 DOI: 10.1097/BPO.0000000000002221  0.106
2009 Murphy RF, Caliendo AM. Relative quantity of cerebrospinal fluid herpes simplex virus DNA in adult cases of encephalitis and meningitis. American Journal of Clinical Pathology. 132: 687-90. PMID 19846808 DOI: 10.1309/AJCP0KN1PCHEYSIK  0.105
2008 Stone PC, Murphy RF, Matar HE, Almerie MQ. Measuring the individual quality of life of patients with prostate cancer. Prostate Cancer and Prostatic Diseases. 11: 390-6. PMID 18427572 DOI: 10.1038/pcan.2008.16  0.104
2020 Murphy RF, Sleasman B, Osborn D, Barfield WR, Dow MA, Mooney JF. A Single Sugar-Tong Splint Can Maintain Pediatric Forearm Fractures. Orthopedics. 1-5. PMID 33238016 DOI: 10.3928/01477447-20201119-06  0.103
2012 Murphy RF, Komlodi-Pasztor E, Robey R, Balis FM, Farrell NP, Fojo T. Retained platinum uptake and indifference to p53 status make novel transplatinum agents active in platinum-resistant cells compared to cisplatin and oxaliplatin. Cell Cycle (Georgetown, Tex.). 11: 963-73. PMID 22333583 DOI: 10.4161/Cc.11.5.19447  0.101
2018 Murphy RF, Pacult MA, Barfield WR, Gross RH, Mooney JF. Experience with definitive instrumented final fusion after posterior-based distraction lengthening in patients with early-onset spinal deformity: single center results. Journal of Pediatric Orthopedics. Part B. PMID 30300258 DOI: 10.1097/BPB.0000000000000559  0.101
2017 Johnson GR, Kangas JD, Dovzhenko A, Trojok R, Voigt K, Majarian TD, Palme K, Murphy RF. A method for characterizing phenotypic changes in highly variable cell populations and its application to high content screening of Arabidopsis thaliana protoplasts. Cytometry. Part a : the Journal of the International Society For Analytical Cytology. PMID 28245335 DOI: 10.1002/cyto.a.23067  0.101
2010 Meany H, Balis FM, Aikin A, Whitcomb P, Murphy RF, Steinberg SM, Widemann BC, Fox E. Pediatric phase I trial design using maximum target inhibition as the primary endpoint. Journal of the National Cancer Institute. 102: 909-12. PMID 20460632 DOI: 10.1093/jnci/djq174  0.101
2022 Grace A, Murphy R, Dillon A, Smith D, Cryan SA, Heise A, Fitzgerald-Hughes D. Modified poly(L-lysine)-based structures as novel antimicrobials for diabetic foot infections, an study. Hrb Open Research. 5: 4. PMID 36017374 DOI: 10.12688/hrbopenres.13380.1  0.1
2021 Gibson L, Fahey N, Hafer N, Buchholz B, Dunlap D, Murphy R, Achenbach C, Stone C, Cleeton R, O'Neal J, Frediani J, Vos M, Brand O, Nayee R, Wells L, et al. The RADx Tech Clinical Studies Core: A Model for Academic Based Clinical Studies. Ieee Open Journal of Engineering in Medicine and Biology. 2: 152-157. PMID 34192287 DOI: 10.1109/OJEMB.2021.3070830  0.097
2009 Stone PC, Murphy RF, Matar HE, Almerie MQ. Quality of life in patients with prostate cancer: development and application of a hybrid assessment method. Prostate Cancer and Prostatic Diseases. 12: 72-7. PMID 18475286 DOI: 10.1038/pcan.2008.28  0.095
2020 Hardesty CK, Murphy RF, Pawelek JB, Glotzbecker MP, Hosseini P, Johnston CE, Emans J, Akbarnia BA. An initial effort to define an early onset scoliosis "graduate"-The Pediatric Spine Study Group experience. Spine Deformity. PMID 33258069 DOI: 10.1007/s43390-020-00255-6  0.092
2022 Zhang K, Karanth S, Patel B, Murphy R, Jiang X. A Multi-task Gaussian Process Self-attention Neural Network for Real-time Prediction of the Need for Mechanical Ventilators in COVID-19 Patients. Journal of Biomedical Informatics. 104079. PMID 35489596 DOI: 10.1016/j.jbi.2022.104079  0.091
2022 Quan T, Matsumoto H, Bonsignore-Opp L, Ramo B, Murphy RF, Brooks JT, Welborn MC, Emans JB, Anari JB, Johnston CE, Akbarnia BA, McCarthy R, Flynn J, Sawyer JR, Vitale MG, et al. Definition of Tweener: Consensus Among Experts in Treating Early-onset Scoliosis. Journal of Pediatric Orthopedics. PMID 36729774 DOI: 10.1097/BPO.0000000000002321  0.091
2007 Jiang M, Pabla N, Murphy RF, Yang T, Yin XM, Degenhardt K, White E, Dong Z. Nutlin-3 protects kidney cells during cisplatin therapy by suppressing Bax/Bak activation. The Journal of Biological Chemistry. 282: 2636-45. PMID 17130128 DOI: 10.1074/Jbc.M606928200  0.09
2018 Mooney JF, Murphy RF. Septic arthritis of the pediatric hip: update on diagnosis and treatment. Current Opinion in Pediatrics. PMID 30461509 DOI: 10.1097/MOP.0000000000000703  0.09
2021 Judge C, Murphy R, Reddin C, Cormican S, Smyth A, O'Halloran M, O'Donnell MJ. Trends in Adaptive Design Methods in Dialysis Clinical Trials: A Systematic Review. Kidney Medicine. 3: 925-941. PMID 34939002 DOI: 10.1016/j.xkme.2021.08.001  0.088
2019 Majarian TD, Murphy RF, Lakdawala SS. Learning the sequence of influenza A genome assembly during viral replication using point process models and fluorescence in situ hybridization. Plos Computational Biology. 15: e1006199. PMID 30689627 DOI: 10.1371/journal.pcbi.1006199  0.088
2009 Murphy R, Daugherty J, Houry D. Contraindications to Phenytoin in Emergency Department Patients with Seizures Journal of Emergency Medicine. 37: 355-358. PMID 18325712 DOI: 10.1016/j.jemermed.2007.08.067  0.087
2020 Murphy RF, Barfield WR, Emans JB, Akbarnia B, Thompson G, Sponseller P, Skaggs D, Marks D, Smith JT, Flynn J, Presson A, Sawyer JR, Johnston C. Minimum 5-Year Follow-up on Graduates of Growing Spine Surgery for Early Onset Scoliosis. Journal of Pediatric Orthopedics. PMID 32773654 DOI: 10.1097/Bpo.0000000000001646  0.086
2023 Kitt K, Murphy R, Clarke A, Reddin C, Ferguson J, Bosch J, Whiteley W, Canavan M, Judge C, O'Donnell M. Antiplatelet therapy and incident cognitive impairment or dementia-a systematic review and meta-analysis of randomised clinical trials. Age and Ageing. 52. PMID 37897809 DOI: 10.1093/ageing/afad197  0.086
2015 Murphy RF, Moisan A, Kelly DM, Warner WC, Jones TL, Sawyer JR. Use of Vertical Expandable Prosthetic Titanium Rib (VEPTR) in the Treatment of Congenital Scoliosis Without Fused Ribs. Journal of Pediatric Orthopedics. PMID 25887832 DOI: 10.1097/BPO.0000000000000460  0.086
2022 Clarke A, Reddin C, Murphy R, O'Donnell MJ. Does Prior Use of Antiplatelet Therapy Modify the Effect of Dual Antiplatelet Therapy in Transient Ischaemic Attack/Minor Ischemic Stroke: A Systematic Review and Meta-analysis. European Journal of Neurology. PMID 35652757 DOI: 10.1111/ene.15433  0.085
2022 Soni A, Herbert C, Pretz C, Stamegna P, Filippaios A, Shi Q, Suvarna T, Harman E, Schrader S, Nowak C, Schramm E, Kheterpal V, Behar S, Tarrant S, Ferranto J, ... ... Murphy R, et al. Finding a Needle in the Haystack: Design and Implementation of a Digital Site-less Clinical Study of Serial Rapid Antigen Testing to Identify Asymptomatic SARS-CoV-2 Infection. Medrxiv : the Preprint Server For Health Sciences. PMID 35982663 DOI: 10.1101/2022.08.04.22278274  0.085
2014 Kumar A, Rao A, Bhavani S, Newberg JY, Murphy RF. Automated analysis of immunohistochemistry images identifies candidate location biomarkers for cancers. Proceedings of the National Academy of Sciences of the United States of America. 111: 18249-54. PMID 25489103 DOI: 10.1073/Pnas.1415120112  0.085
2005 Brabec M, Schober D, Wagner E, Bayer N, Murphy RF, Blaas D, Fuchs R. Opening of size-selective pores in endosomes during human rhinovirus serotype 2 in vivo uncoating monitored by single-organelle flow analysis. Journal of Virology. 79: 1008-16. PMID 15613329 DOI: 10.1128/JVI.79.2.1008-1016.2005  0.083
2014 Pretell-Mazzini J, Murphy RF, Sawyer JR, Spence DD, Warner WC, Beaty JH, Moisan A, Kelly DM. Surgical treatment of symptomatic accessory navicular in children and adolescents. American Journal of Orthopedics (Belle Mead, N.J.). 43: 110-3. PMID 24660174  0.083
2022 Paramithiotis E, Sugden S, Papp E, Bonhomme M, Chermak T, Crawford SY, Demetriades SZ, Galdos G, Lambert BL, Mattison J, McDade T, Pillet S, Murphy R. Cellular Immunity Is Critical for Assessing COVID-19 Vaccine Effectiveness in Immunocompromised Individuals. Frontiers in Immunology. 13: 880784. PMID 35693815 DOI: 10.3389/fimmu.2022.880784  0.082
2022 Matsumoto H, Sinha R, Roye BD, Ball JR, Skaggs KF, Brooks JT, Welborn MC, Emans JB, Anari JB, Johnston CE, Akbarnia BA, Vitale MG, Murphy RF. Contraindications to magnetically controlled growing rods: consensus among experts in treating early onset scoliosis. Spine Deformity. PMID 35780448 DOI: 10.1007/s43390-022-00543-3  0.082
2010 Widemann BC, Balis FM, Kim A, Boron M, Jayaprakash N, Shalabi A, O'Brien M, Eby M, Cole DE, Murphy RF, Fox E, Ivy P, Adamson PC. Glucarpidase, leucovorin, and thymidine for high-dose methotrexate-induced renal dysfunction: clinical and pharmacologic factors affecting outcome. Journal of Clinical Oncology : Official Journal of the American Society of Clinical Oncology. 28: 3979-86. PMID 20679598 DOI: 10.1200/JCO.2009.25.4540  0.082
2006 Herédi-Szabó K, Murphy RF, Lovas S. Different signal responses to lamprey GnRH-III in human cancer cells International Journal of Peptide Research and Therapeutics. 12: 359-364. DOI: 10.1007/S10989-006-9039-Y  0.081
2018 Murphy RF, Plumblee L, Barfield WB, Murphy JS, Fuerstenau N, Spence DD, Kelly DM, Dow MA, Mooney JF. Septic Arthritis of the Hip-Risk Factors Associated With Secondary Surgery. The Journal of the American Academy of Orthopaedic Surgeons. PMID 30520802 DOI: 10.5435/JAAOS-D-18-00058  0.08
2015 Shore BJ, Murphy RF, Hogue GD. Quality, Safety, Value: From Theory to Practice Management What Should We Measure? Journal of Pediatric Orthopedics. 35: S61-6. PMID 26049309 DOI: 10.1097/BPO.0000000000000551  0.079
2019 Judge C, Ruttledge S, Costello M, Murphy R, Loughlin E, Alvarez-Iglesias A, Ferguson J, Gorey S, Nolan A, Canavan M, O'Halloran M, O'Donnell MJ. Lipid Lowering Therapy, Low-Density Lipoprotein Level and Risk of Intracerebral Hemorrhage - A Meta-Analysis. Journal of Stroke and Cerebrovascular Diseases : the Official Journal of National Stroke Association. PMID 30878368 DOI: 10.1016/j.jstrokecerebrovasdis.2019.02.018  0.078
2021 Xu AL, Marrache M, Hardesty CK, Groves ML, Erickson MA, Murphy RF, Thompson GH, Sponseller PD. Baclofen Pump Use: Complications After Growth-friendly Instrumentation for Early-onset Scoliosis. Journal of Pediatric Orthopedics. PMID 34882588 DOI: 10.1097/BPO.0000000000002035  0.078
2017 Murphy RF, Mooney JF. The Crankshaft Phenomenon. The Journal of the American Academy of Orthopaedic Surgeons. 25: e185-e193. PMID 28837459 DOI: 10.5435/JAAOS-D-16-00584  0.077
2011 Luchenko VL, Salcido CD, Zhang Y, Agama K, Komlodi-Pasztor E, Murphy RF, Giaccone G, Pommier Y, Bates SE, Varticovski L. Schedule-dependent synergy of histone deacetylase inhibitors with DNA damaging agents in small cell lung cancer. Cell Cycle (Georgetown, Tex.). 10: 3119-28. PMID 21900747 DOI: 10.4161/cc.10.18.17190  0.077
1986 Kennedy DG, Van den Berg HW, Clarke R, Murphy RF. Enhancement of methotrexate cytotoxicity towards the MDA.MB.436 human breast cancer cell line by dipyridamole. The role of methotrexate polyglutamates. Biochemical Pharmacology. 35: 3053-6. PMID 2428377 DOI: 10.1016/0006-2952(86)90385-0  0.077
2000 Kálnay A, Pályi I, Vincze B, Mihalik R, Mezõ I, Pató J, Seprõdi J, Lovas S, Murphy RF. Influence on antiproliferative activity of structural modification and conjugation of gonadotropin-releasing hormone (GnRH) analogues. Cell Proliferation. 33: 275-85. PMID 11063130 DOI: 10.1046/J.1365-2184.2000.00180.X  0.076
2016 Lee JM, Peer CJ, Yu M, Amable L, Gordon N, Annunziata CM, Houston N, Goey AK, Sissung TM, Parker B, Minasian L, Chiou V, Murphy RF, Widemann BC, Figg WD, et al. Sequence-specific pharmacokinetic and pharmacodynamic phase I/Ib study of olaparib tablets and carboplatin in women's cancer. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. PMID 27663600 DOI: 10.1158/1078-0432.Ccr-16-1546  0.076
2002 Price JH, Goodacre A, Hahn K, Hodgson L, Hunter EA, Krajewski S, Murphy RF, Rabinovich A, Reed JC, Heynen S. Advances in molecular labeling, high throughput imaging and machine intelligence portend powerful functional cellular biochemistry tools. Journal of Cellular Biochemistry. Supplement. 39: 194-210. PMID 12552619 DOI: 10.1002/Jcb.10448  0.076
1999 Pályi I, Vincze B, Lovas S, Mezö I, Pató J, Kálnay A, Turi G, Gaál D, Mihalik R, Péter I, Teplán I, Murphy RF. Gonadotropin-releasing hormone analogue conjugates with strong selective antitumor activity. Proceedings of the National Academy of Sciences of the United States of America. 96: 2361-6. PMID 10051647 DOI: 10.1073/Pnas.96.5.2361  0.075
1988 Taylor SR, Blatt J, Costantino JP, Roederer M, Murphy RF. Flow cytometric DNA analysis of neuroblastoma and ganglioneuroma: A 10-year retrospective study Cancer. 62: 749-754. PMID 3395958 DOI: 10.1002/1097-0142(19880815)62:4<749::AID-CNCR2820620418>3.0.CO;2-W  0.075
1985 Kennedy DG, Van den Berg HW, Clarke R, Murphy RF. The effect of leucovorin on the synthesis of methotrexate poly-gamma-glutamates in the MCF-7 human breast cancer cell line. Biochemical Pharmacology. 34: 2897-903. PMID 2411271 DOI: 10.1016/0006-2952(85)90013-9  0.075
2009 Murphy R, Jahnke K, Houry D. Characteristics of patients who present to the emergency department with molar pregnancy. Southern Medical Journal. 101: 797-9. PMID 18622352 DOI: 10.1097/SMJ.0b013e31817bea05  0.074
2022 Guzek RH, Murphy R, Hardesty CK, Emans JB, Garg S, Smith JT, Roye BD, Glotzbecker MP, Sturm PF, Snyder BD, Poon SC, Poe-Kochert C, Anari JB. Mortality in Early-Onset Scoliosis During the Growth-friendly Surgery Era. Journal of Pediatric Orthopedics. 42: 131-137. PMID 35138296 DOI: 10.1097/BPO.0000000000001983  0.074
2007 Zhang M, Murphy RF, Agrawal DK. Decoding IgE Fc receptors Immunologic Research. 37: 1-16. PMID 17496343 DOI: 10.1007/BF02686092  0.074
2016 Li Y, Majarian TD, Naik AW, Johnson GR, Murphy RF. Point process models for localization and interdependence of punctate cellular structures. Cytometry. Part a : the Journal of the International Society For Analytical Cytology. PMID 27327612 DOI: 10.1002/cyto.a.22873  0.074
2016 Murphy RF, Kim YJ. Surgical Management of Pediatric Developmental Dysplasia of the Hip. The Journal of the American Academy of Orthopaedic Surgeons. PMID 27509038 DOI: 10.5435/JAAOS-D-15-00154  0.073
1985 Kennedy DG, Van den Berg HW, Clarke R, Murphy RF. The effect of the rate of cell proliferation on the synthesis of methotrexate poly-gamma-glutamates in two human breast cancer cell lines. Biochemical Pharmacology. 34: 3087-90. PMID 2412561 DOI: 10.1016/0006-2952(85)90151-0  0.073
2020 Dong X, Li J, Soysal E, Bian J, DuVall SL, Hanchrow E, Liu H, Lynch KE, Matheny M, Natarajan K, Ohno-Machado L, Pakhomov S, Reeves RM, Sitapati AM, Abhyankar S, ... ... Murphy R, et al. COVID-19 TestNorm - A tool to normalize COVID-19 testing names to LOINC codes. Journal of the American Medical Informatics Association : Jamia. PMID 32569358 DOI: 10.1093/Jamia/Ocaa145  0.073
2021 Jary A, Teguete I, Sidibé Y, Kodio A, Dolo O, Burrel S, Boutolleau D, Beauvais-Remigereau L, Sayon S, Kampo M, Traoré FT, Sylla M, Achenbach C, Murphy R, Berçot B, et al. Prevalence of cervical HPV infection, sexually transmitted infections and associated antimicrobial resistance in women attending cervical cancer screening in Mali. International Journal of Infectious Diseases : Ijid : Official Publication of the International Society For Infectious Diseases. PMID 34146691 DOI: 10.1016/j.ijid.2021.06.024  0.073
2005 Murphy RF. Location proteomics: A systems approach to subcellular location Biochemical Society Transactions. 33: 535-538. PMID 15916558 DOI: 10.1042/BST0330535  0.072
2006 Chen X, Velliste M, Murphy RF. Automated interpretation of subcellular patterns in fluorescence microscope images for location proteomics. Cytometry. Part a : the Journal of the International Society For Analytical Cytology. 69: 631-40. PMID 16752421 DOI: 10.1002/cyto.a.20280  0.071
2023 Xavier D, Murphy R, Pais P, Pandian J, Gosala SRK, Mathur N, Khurana D, Sundararajan R, Gupta R, Joshi R, Vanchilingam S, Venkatarathanamma PN, Desai S, Reddin C, O'Donnell M, et al. Characteristics, clinical practice patterns and outcomes of strokes in India: INSPIRE - A multicentre prospective study. International Journal of Stroke : Official Journal of the International Stroke Society. 17474930231175584. PMID 37114983 DOI: 10.1177/17474930231175584  0.07
1986 Clarke R, van den Berg H, Murphy R. Response of human breast cancer cells to a combination of cytotoxic drugs and pharmacological concentrations of oestrogens European Journal of Cancer and Clinical Oncology. 22: 750. DOI: 10.1016/0277-5379(86)90305-6  0.07
2019 Ruan X, Johnson GR, Bierschenk I, Nitschke R, Boerries M, Busch H, Murphy RF. Image-derived models of cell organization changes during differentiation and drug treatments. Molecular Biology of the Cell. mbcE19020080. PMID 31774723 DOI: 10.1091/mbc.E19-02-0080  0.07
1989 Nelson J, Cremin M, Murphy RF. Synthesis of somatostatin by breast cancer cells and their inhibition by exogenous somatostatin and sandostatin. British Journal of Cancer. 59: 739-42. PMID 2567608 DOI: 10.1038/bjc.1989.154  0.07
1982 Gimmon Z, Murphy RF, Chen MH, Nachbauer CA, Fischer JE, Joffe SN. The effect of parenteral and enteral nutrition on portal and systemic immunoreactivities of gastrin, glucagon and vasoactive intestinal polypeptide (VIP). Annals of Surgery. 196: 571-5. PMID 6812513 DOI: 10.1097/00000658-198211000-00010  0.07
2021 Murphy RF, Van Nortwick SS, Jones R, Mooney JF. Evaluation and Management of Common Accessory Ossicles of the Foot and Ankle in Children and Adolescents. The Journal of the American Academy of Orthopaedic Surgeons. PMID 33475303 DOI: 10.5435/JAAOS-D-20-00218  0.069
1997 Mezö I, Lovas S, Pályi I, Vincze B, Kálnay A, Turi G, Vadász Z, Seprödi J, Idei M, Tóth G, Gulyás E, Otvös F, Mák M, Horváth JE, Teplán I, ... Murphy RF, et al. Synthesis of gonadotropin-releasing hormone III analogs. Structure-antitumor activity relationships. Journal of Medicinal Chemistry. 40: 3353-8. PMID 9341910 DOI: 10.1021/Jm9700981  0.069
2005 Herédi-Szabó K, Lubke J, Toth G, Murphy RF, Lovas S. Importance of the central region of lamprey gonadotropin-releasing hormone III in the inhibition of breast cancer cell growth Peptides. 26: 419-422. PMID 15652648 DOI: 10.1016/J.Peptides.2004.10.007  0.069
1985 Clarke R, Van den Berg HW, Kennedy DG, Murphy RF. Oestrogen receptor status and the response of human breast cancer cell lines to a combination of methotrexate and 17-beta oestradiol. British Journal of Cancer. 51: 365-9. PMID 3970812 DOI: 10.1038/bjc.1985.48  0.069
2013 Weber S, Fernández-Cachón ML, Nascimento JM, Knauer S, Offermann B, Murphy RF, Boerries M, Busch H. Label-free detection of neuronal differentiation in cell populations using high-throughput live-cell imaging of PC12 cells. Plos One. 8: e56690. PMID 23451069 DOI: 10.1371/journal.pone.0056690  0.069
2019 Murphy RF, Mooney JF. Current concepts in neuromuscular scoliosis. Current Reviews in Musculoskeletal Medicine. PMID 30941730 DOI: 10.1007/s12178-019-09552-8  0.069
1980 Flanagan RW, Murphy RF, Buchanan KD. Circulating forms of glucagon and related peptides in normal subjects and uraemic patients. Biochemical Society Transactions. 8: 426-7. PMID 7450164 DOI: 10.1042/BST0080426  0.068
2007 Pandey S, Murphy RF, Agrawal DK. Recent advances in the immunobiology of ceramide Experimental and Molecular Pathology. 82: 298-309. PMID 17045585 DOI: 10.1016/j.yexmp.2006.07.009  0.068
2004 Murphy RF. Automated interpretation of protein subcellular location patterns: implications for early cancer detection and assessment. Annals of the New York Academy of Sciences. 1020: 124-31. PMID 15208189 DOI: 10.1196/annals.1310.013  0.068
2006 Chen X, Murphy RF. Automated interpretation of protein subcellular location patterns. International Review of Cytology. 249: 193-227. PMID 16697284 DOI: 10.1016/S0074-7696(06)49004-5  0.067
2020 Murphy RF, Pacult MA, Barfield WR, Mooney JF. Hemiepiphyseodesis for Juvenile and Adolescent Tibia Vara Utilizing Percutaneous Transphyseal Screws. Journal of Pediatric Orthopedics. 40: 17-22. PMID 31815857 DOI: 10.1097/BPO.0000000000001067  0.066
2017 Murphy RF, Pacult MA, Barfield WR, Mooney JF. Hemiepiphyseodesis for Juvenile and Adolescent Tibia Vara Utilizing Percutaneous Transphyseal Screws. Journal of Pediatric Orthopedics. PMID 28891825 DOI: 10.1097/BPO.0000000000001067  0.066
2006 Agrawal A, Yang J, Murphy RF, Agrawal DK. Regulation of the p14ARF-Mdm2-p53 pathway: An overview in breast cancer Experimental and Molecular Pathology. 81: 115-122. PMID 16919268 DOI: 10.1016/j.yexmp.2006.07.001  0.066
2012 O'Donnell K, Murphy R, Ostermann J, Masnick M, Whetten RA, Madden E, Thielman NM, Whetten K. A brief assessment of learning for orphaned and abandoned children in low and middle income countries. Aids and Behavior. 16: 480-90. PMID 21538088 DOI: 10.1007/s10461-011-9940-z  0.066
1990 Clarke R, van den Berg HW, Murphy RF. Reduction of the membrane fluidity of human breast cancer cells by tamoxifen and 17 beta-estradiol. Journal of the National Cancer Institute. 82: 1702-5. PMID 2231758 DOI: 10.1093/JNCI/82.21.1702  0.065
1999 Lovas S, Pályi I, Vincze B, Horváth J, Kovács M, Mezö I, Tóth G, Teplán I, Murphy RF. Direct anticancer activity of gonadotropin-releasing hormone-III. The Journal of Peptide Research : Official Journal of the American Peptide Society. 52: 384-9. PMID 9894843 DOI: 10.1111/J.1399-3011.1998.Tb00662.X  0.065
2012 Buck TE, Li J, Rohde GK, Murphy RF. Toward the virtual cell: automated approaches to building models of subcellular organization "learned" from microscopy images. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 34: 791-9. PMID 22777818 DOI: 10.1002/Bies.201200032  0.065
2008 Glory E, Newberg J, Murphy RF. AUTOMATED COMPARISON OF PROTEIN SUBCELLULAR LOCATION PATTERNS BETWEEN IMAGES OF NORMAL AND CANCEROUS TISSUES. Proceedings / Ieee International Symposium On Biomedical Imaging: From Nano to Macro. Ieee International Symposium On Biomedical Imaging. 4540993: 304-307. PMID 20628549 DOI: 10.1109/ISBI.2008.4540993  0.065
1989 Abramowsky CR, Taylor SR, Anton AH, Berk AI, Roederer M, Murphy RF. Flow cytometry DNA ploidy analysis and catecholamine secretion profiles in neuroblastoma. Cancer. 63: 1752-6. PMID 2702581 DOI: 10.1002/1097-0142(19900501)63:9<1752::AID-CNCR2820630916>3.0.CO;2-7  0.065
2016 Roybal KT, Buck TE, Ruan X, Cho BH, Clark DJ, Ambler R, Tunbridge HM, Zhang J, Verkade P, Wülfing C, Murphy RF. Computational spatiotemporal analysis identifies WAVE2 and cofilin as joint regulators of costimulation-mediated T cell actin dynamics. Science Signaling. 9: rs3. PMID 27095595 DOI: 10.1126/scisignal.aad4149  0.065
2021 Murphy R, Palm M, Mustonen V, Warringer J, Farewell A, Parts L, Moradigaravand D. Genomic Epidemiology and Evolution of in Wild Animals in Mexico. Msphere. 6. PMID 33408222 DOI: 10.1128/mSphere.00738-20  0.065
2012 Li J, Xiong L, Schneider J, Murphy RF. Protein subcellular location pattern classification in cellular images using latent discriminative models. Bioinformatics (Oxford, England). 28: i32-9. PMID 22689776 DOI: 10.1093/Bioinformatics/Bts230  0.065
2006 Wagonfeld JB, Murphy RF. The nonphysician provider in the gastroenterology practice. Gastrointestinal Endoscopy Clinics of North America. 16: 719-25. PMID 17098618 DOI: 10.1016/j.giec.2006.08.002  0.065
2014 Pretell-Mazzini J, Murphy RF, Kushare I, Dormans JP. Unicameral bone cysts: general characteristics and management controversies. The Journal of the American Academy of Orthopaedic Surgeons. 22: 295-303. PMID 24788445 DOI: 10.5435/JAAOS-22-05-295  0.065
2001 Murphy LO, Cluck MW, Lovas S, Otvös F, Murphy RF, Schally AV, Permert J, Larsson J, Knezetic JA, Adrian TE. Pancreatic cancer cells require an EGF receptor-mediated autocrine pathway for proliferation in serum-free conditions. British Journal of Cancer. 84: 926-35. PMID 11286473 DOI: 10.1054/Bjoc.2001.1698  0.064
2020 Morgan J, Galvin S, Goldstein J, Fant C, Murphy R, Doobay-Persaud A. From Creation to Evaluation: A Comprehensive Global Health Scholars Program for Graduate Medical Education Trainees. Journal of Medical Education and Curricular Development. 7: 2382120520951821. PMID 32913894 DOI: 10.1177/2382120520951821  0.064
2015 Johnson GR, Li J, Shariff A, Rohde GK, Murphy RF. Automated Learning of Subcellular Variation among Punctate Protein Patterns and a Generative Model of Their Relation to Microtubules. Plos Computational Biology. 11: e1004614. PMID 26624011 DOI: 10.1371/Journal.Pcbi.1004614  0.064
2005 Baravalle G, Schober D, Huber M, Bayer N, Murphy RF, Fuchs R. Transferrin recycling and dextran transport to lysosomes is differentially affected by bafilomycin, nocodazole, and low temperature. Cell and Tissue Research. 320: 99-113. PMID 15714281 DOI: 10.1007/s00441-004-1060-x  0.064
2019 Carleton PF, Schachter S, Lash TB, Chen J, Merchak T, Brand O, Buchholz B, Gaydos C, Lam W, Manabe Y, Martin G, McFall S, McManus D, Murphy R, Parrish J. Point-of-Care Technology Research Network: An evolving model for collaborative translational research in biomedical engineering. Current Opinion in Biomedical Engineering. 11: 145-148. PMID 33178901 DOI: 10.1016/j.cobme.2019.10.011  0.064
1987 CLARKE R, VAN DEN BERG HW, MURPHY RF. The ability of oestrogen to modulate the effects of cytotoxic drugs in human breast cancer cells: influence of oestrogen receptor status and choice of drug Biochemical Society Transactions. 15: 242-243. DOI: 10.1042/BST0150242  0.064
2010 Spidlen J, Moore W, Parks D, Goldberg M, Bray C, Bierre P, Gorombey P, Hyun B, Hubbard M, Lange S, Lefebvre R, Leif R, Novo D, Ostruszka L, Treister A, ... ... Murphy RF, et al. Data File Standard for Flow Cytometry, version FCS 3.1. Cytometry. Part a : the Journal of the International Society For Analytical Cytology. 77: 97-100. PMID 19937951 DOI: 10.1002/Cyto.A.20825  0.064
2015 Murphy RF. Building cell models and simulations from microscope images. Methods (San Diego, Calif.). PMID 26484733 DOI: 10.1016/j.ymeth.2015.10.011  0.064
1999 Otvös F, Murphy RF, Lovas S. Coupling difficulty following replacement of Tyr with HOTic during synthesis of an analog of an EGF B-loop fragment. The Journal of Peptide Research : Official Journal of the American Peptide Society. 53: 302-7. PMID 10231718 DOI: 10.1034/J.1399-3011.1999.00026.X  0.063
2013 McCully CM, Pastakia D, Bacher J, Thomas ML, Steffen-Smith EA, Saleem K, Murphy RF, Walbridge S, Brinster L, Widemann BC, Warren KE. Model for concomitant microdialysis sampling of the pons and cerebral cortex in rhesus macaques (Macaca mulatta). Comparative Medicine. 63: 355-60. PMID 24209972  0.063
2020 Murphy RF, Barfield WR, St Hilaire T, Smith JT, Emans JB, Samdani A, Garg S, Sawyer JR, Pahys JM. Prospectively collected surgeon indications for discontinuation of a lengthening program for early-onset scoliosis. Spine Deformity. PMID 31981149 DOI: 10.1007/s43390-020-00048-x  0.063
2009 Buck TE, Rao A, Coelho LP, Fuhrman MH, Jarvik JW, Berget PB, Murphy RF. Cell cycle dependence of protein subcellular location inferred from static, asynchronous images. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2009: 1016-9. PMID 19963740 DOI: 10.1109/IEMBS.2009.5332888  0.063
2017 Diedrich B, Rigbolt KT, Röring M, Herr R, Kaeser-Pebernard S, Gretzmeier C, Murphy RF, Brummer T, Dengjel J. Discrete cytosolic macromolecular BRAF complexes exhibit distinct activities and composition. The Embo Journal. PMID 28093501 DOI: 10.15252/embj.201694732  0.063
2012 Murphy RF. CellOrganizer: Image-derived models of subcellular organization and protein distribution. Methods in Cell Biology. 110: 179-93. PMID 22482949 DOI: 10.1016/B978-0-12-388403-9.00007-2  0.063
2022 Sun H, Fu X, Abraham S, Shen J, Murphy RF. Improving and evaluating deep learning models of cellular organization. Bioinformatics (Oxford, England). PMID 36264139 DOI: 10.1093/bioinformatics/btac688  0.063
2009 Newberg JY, Li J, Rao A, Pontén F, Uhlén M, Lundberg E, Murphy RF. Automated Analysis of Human Protein Atlas Immunofluorescence Images. Proceedings / Ieee International Symposium On Biomedical Imaging: From Nano to Macro. Ieee International Symposium On Biomedical Imaging. 5193229: 1023-1026. PMID 20628548 DOI: 10.1109/ISBI.2009.5193229  0.063
1989 Armstrong PE, Foy WL, Johnston CF, Shaw C, Murphy RF, Buchanan KD. Peptide histidine isoleucine (PHI) immunoreactivity in the rat retina: identification and characterisation by radioimmunoassay, immunohistochemistry and high-performance liquid chromatography. Regulatory Peptides. 25: 325-32. PMID 2772267 DOI: 10.1016/0167-0115(89)90180-8  0.062
2006 Chen SC, Murphy RF. A graphical model approach to automated classification of protein subcellular location patterns in multi-cell images. Bmc Bioinformatics. 7: 90. PMID 16504075 DOI: 10.1186/1471-2105-7-90  0.062
2022 Diakite B, Kassogue Y, Maiga M, Dolo G, Kassogue O, Musa J, Morhason-Bello I, Traore B, Traore CB, Kamate B, Coulibaly A, Bah S, Nadifi S, Murphy R, Holl JL, et al. Association of the Polymorphism and Cervical Cancer Risk: A Meta-Analysis. Genetics Research. 2022: 2319161. PMID 35919032 DOI: 10.1155/2022/2319161  0.062
2009 Jackson C, Murphy RF, Kovacević J. Intelligent acquisition and learning of fluorescence microscope data models. Ieee Transactions On Image Processing : a Publication of the Ieee Signal Processing Society. 18: 2071-84. PMID 19502128 DOI: 10.1109/Tip.2009.2024580  0.062
2020 O'Dwyer J, Cullen M, Fattah S, Murphy R, Stefanovic S, Kovarova L, Pravda M, Velebny V, Heise A, Duffy GP, Cryan SA. Development of a Sustained Release Nano-In-Gel Delivery System for the Chemotactic and Angiogenic Growth Factor Stromal-Derived Factor 1α. Pharmaceutics. 12. PMID 32512712 DOI: 10.3390/pharmaceutics12060513  0.062
2005 Kou Z, Cohen WW, Murphy RF. High-recall protein entity recognition using a dictionary. Bioinformatics (Oxford, England). 21: i266-73. PMID 15961466 DOI: 10.1093/bioinformatics/bti1006  0.062
2024 Soetikno AG, Lundberg A, Ozer E, Wu SA, Welch SB, Mason M, Liu Y, Havey RJ, Murphy R, Hawkins C, Moss CB, Post LA. Middle East and North Africa: Updated Surveillance Metrics and History of the COVID-19 Pandemic (2020-2023)This study updates the COVID-19 pandemic surveillance in the Middle East and North Africa we first conducted in 2020 with two additional years of data for the region. Jmir Public Health and Surveillance. PMID 38568184 DOI: 10.2196/53219  0.062
2008 Newberg J, Murphy RF. A framework for the automated analysis of subcellular patterns in human protein atlas images. Journal of Proteome Research. 7: 2300-8. PMID 18435555 DOI: 10.1021/Pr7007626  0.062
2009 Pabla N, Murphy RF, Liu K, Dong Z. The copper transporter Ctr1 contributes to cisplatin uptake by renal tubular cells during cisplatin nephrotoxicity. American Journal of Physiology. Renal Physiology. 296: F505-11. PMID 19144690 DOI: 10.1152/Ajprenal.90545.2008  0.062
2018 Murphy RF, Plumblee L, Sleasman B, Barfield W, Dow MA, Mooney JF. Clinical and radiographic comparison of single-sugar-tong splint to long-arm cast immobilization for pediatric forearm fractures. Journal of Pediatric Orthopedics. Part B. PMID 30531491 DOI: 10.1097/BPB.0000000000000572  0.062
2006 Wang YL, Hahn KM, Murphy RF, Horwitz AF. From imaging to understanding: Frontiers in Live Cell Imaging, Bethesda, MD, April 19-21, 2006. The Journal of Cell Biology. 174: 481-4. PMID 16908666 DOI: 10.1083/Jcb.200607097  0.061
2007 Chebira A, Barbotin Y, Jackson C, Merryman T, Srinivasa G, Murphy RF, Kovacević J. A multiresolution approach to automated classification of protein subcellular location images. Bmc Bioinformatics. 8: 210. PMID 17578580 DOI: 10.1186/1471-2105-8-210  0.061
2013 Wang ZM, Ho JX, Ruble JR, Rose J, Rüker F, Ellenburg M, Murphy R, Click J, Soistman E, Wilkerson L, Carter DC. Structural studies of several clinically important oncology drugs in complex with human serum albumin. Biochimica Et Biophysica Acta. 1830: 5356-74. PMID 23838380 DOI: 10.1016/J.Bbagen.2013.06.032  0.061
2013 Dodge KA, Goodman WB, Murphy R, O'Donnell K, Sato J. Toward Population Impact from Home Visiting. Zero to Three. 33: 17-23. PMID 23526864  0.061
2024 Lundberg A, Wu SA, Soetikno AG, Hawkins C, Murphy R, Havey RJ, Ozer E, Moss C, Welch SB, Mason M, Liu Y, Post LA. European Surveillance and History of the COVID-19 Pandemic: Updated Epidemiological Assessment. Jmir Public Health and Surveillance. PMID 38568186 DOI: 10.2196/53551  0.061
2015 Murphy RF, Naqvi M, Miller PE, Feldman L, Shore BJ. Pediatric orthopaedic lower extremity trauma and venous thromboembolism. Journal of Children's Orthopaedics. 9: 381-4. PMID 26459458 DOI: 10.1007/s11832-015-0697-1  0.061
1984 Chance WT, van Lammeren FM, Chen MH, Chen WJ, Murphy RF, Joffe SN, Fischer JE. Plasma and brain cholecystokinin levels in cancer anorexia. The Journal of Surgical Research. 36: 490-8. PMID 6587166 DOI: 10.1016/0022-4804(84)90131-8  0.061
2017 Spealman P, Naik A, May G, Kuersten S, Freebert L, Murphy R, McManus J. Conserved non-AUG uORFs revealed by a novel regression analysis of ribosome profiling data. Genome Research. PMID 29254944 DOI: 10.1101/gr.221507.117  0.061
2015 Byrne M, Murphy R, Kapetanakis A, Ramsey J, Cryan SA, Heise A. Star-Shaped Polypeptides: Synthesis and Opportunities for Delivery of Therapeutics. Macromolecular Rapid Communications. 36: 1862-1876. PMID 26379113 DOI: 10.1002/marc.201500300  0.061
1983 Munda R, Berlatzky Y, Jonung M, Murphy RF, Brackett K, Joffe SN, Alexander JW. Studies on segmental pancreatic autotransplants in dogs. Archives of Surgery (Chicago, Ill. : 1960). 118: 1310-5. PMID 6357148 DOI: 10.1001/ARCHSURG.1983.01390110058013  0.061
2023 Sun H, Soh AWJ, Mitchell LE, Pearson CG, Murphy RF. Basal body organization and cell geometry during the cell cycle in . Molecular Biology of the Cell. mbcE22110508. PMID 36630324 DOI: 10.1091/mbc.E22-11-0508  0.061
2022 Chen H, Murphy RF. Evaluation of cell segmentation methods without reference segmentations. Molecular Biology of the Cell. mbcE22080364. PMID 36515991 DOI: 10.1091/mbc.E22-08-0364  0.061
1979 Conlon JM, Murphy RF, Buchanan KD. Physicochemical and biological properties of glucagon-like polypeptides from porcine colon. Biochimica Et Biophysica Acta. 577: 229-40. PMID 454644 DOI: 10.1016/0005-2795(79)90026-6  0.061
2015 Johnson GR, Buck TE, Sullivan DP, Rohde GK, Murphy RF. Joint modeling of cell and nuclear shape variation. Molecular Biology of the Cell. 26: 4046-56. PMID 26354424 DOI: 10.1091/Mbc.E15-06-0370  0.061
2015 Weinlein JC, Deaderick S, Murphy RF. Morbid obesity increases the risk for systemic complications in patients with femoral shaft fractures. Journal of Orthopaedic Trauma. 29: e91-5. PMID 24978946 DOI: 10.1097/BOT.0000000000000167  0.061
2010 Aggarwal A, Hunter WJ, Aggarwal H, Silva ED, Davey MS, Murphy RF, Agrawal DK. Expression of leukemia/lymphoma-related factor (LRF/POKEMON) in human breast carcinoma and other cancers. Experimental and Molecular Pathology. 89: 140-8. PMID 20471975 DOI: 10.1016/j.yexmp.2010.05.002  0.06
1979 Mason JC, Murphy RF, Henry RW, Buchanan KD. Starvation-induced changes in secretin-like immunoreactivity of human plasma. Biochimica Et Biophysica Acta. 582: 322-31. PMID 760828  0.06
1983 Clarke R, Van den Berg HW, Kennedy DG, Murphy RF. Reduction of the anti-metabolic and anti-proliferative effects of methotrexate by 17 beta-oestradiol in a human breast carcinoma cell line, MDA-MB-436. European Journal of Cancer & Clinical Oncology. 19: 19-24. PMID 6682774 DOI: 10.1016/0277-5379(83)90391-7  0.06
2006 Herédi-Szabó K, Murphy RF, Lovas S. Is IGnRH-III the most potent GnRH analog containing only natural amino acids that specifically inhibits the growth of human breast cancer cells? Journal of Peptide Science. 12: 714-720. PMID 16967433 DOI: 10.1002/Psc.783  0.06
1987 Nelson J, Clarke R, Dickson GR, van den Berg HW, Murphy RF. The effects of Mg2+ ions or EDTA on nuclear integrity and apparent subcellular distribution of unoccupied oestrogen receptors in breast cancer cells. Journal of Steroid Biochemistry. 25: 619-26. PMID 3099086 DOI: 10.1016/0022-4731(86)90003-8  0.06
2014 Murphy RF, LaPorte DM, Wadey VM. Musculoskeletal education in medical school: deficits in knowledge and strategies for improvement. The Journal of Bone and Joint Surgery. American Volume. 96: 2009-14. PMID 25471916 DOI: 10.2106/JBJS.N.00354  0.06
2016 Donovan RM, Tapia JJ, Sullivan DP, Faeder JR, Murphy RF, Dittrich M, Zuckerman DM. Unbiased Rare Event Sampling in Spatial Stochastic Systems Biology Models Using a Weighted Ensemble of Trajectories. Plos Computational Biology. 12: e1004611. PMID 26845334 DOI: 10.1371/Journal.Pcbi.1004611  0.06
2022 Li Y, Swallow J, Gagnier J, Smith JT, Murphy RF, Sponseller PD, Cahill PJ. Pelvic fixation is not always necessary in children with cerebral palsy scoliosis treated with growth-friendly instrumentation. Spine Deformity. PMID 35066795 DOI: 10.1007/s43390-022-00474-z  0.059
2020 Raisaro JL, Marino F, Troncoso-Pastoriza J, Beau-Lejdstrom R, Bellazzi R, Murphy R, Bernstam EV, Wang H, Bucalo M, Chen Y, Gottlieb A, Harmanci A, Kim M, Kim Y, Klann J, et al. SCOR: A secure international informatics infrastructure to investigate COVID-19. Journal of the American Medical Informatics Association : Jamia. PMID 32918447 DOI: 10.1093/Jamia/Ocaa172  0.059
2020 Xu YY, Zhou H, Murphy RF, Shen HB. Consistency and variation of protein subcellular location annotations. Proteins. PMID 32935893 DOI: 10.1002/prot.26010  0.059
2002 Roques EJ, Murphy RF. Objective evaluation of differences in protein subcellular distribution. Traffic (Copenhagen, Denmark). 3: 61-5. PMID 11872143 DOI: 10.1034/j.1600-0854.2002.30108.x  0.059
1990 Nelson J, McGivern M, Walker B, Bailie JR, Murphy RF. Growth-inhibitory and growth-stimulatory effects of epidermal growth factor on human breast cancer cell line, MDA.MB.436: dependence on culture conditions. European Journal of Cancer & Clinical Oncology. 25: 1851-5. PMID 2632266 DOI: 10.1016/0277-5379(89)90358-1  0.059
2021 Reddin C, Judge C, Loughlin E, Murphy R, Costello M, Alvarez A, Ferguson J, Smyth A, Canavan M, O'Donnell MJ. Association of Oral Anticoagulation With Stroke in Atrial Fibrillation or Heart Failure: A Comparative Meta-Analysis. Stroke. STROKEAHA120033910. PMID 34281383 DOI: 10.1161/STROKEAHA.120.033910  0.059
2011 Jackson C, Glory-Afshar E, Murphy RF, Kovacevic J. Model building and intelligent acquisition with application to protein subcellular location classification. Bioinformatics (Oxford, England). 27: 1854-9. PMID 21558154 DOI: 10.1093/bioinformatics/btr286  0.058
1987 Taylor SR, Roederer M, Murphy RF. Flow cytometric DNA analysis of adrenocortical tumors in children. Cancer. 59: 2059-63. PMID 3567866 DOI: 10.1002/1097-0142(19870615)59:12<2059::AID-CNCR2820591216>3.0.CO;2-X  0.058
2013 Naik AW, Kangas JD, Langmead CJ, Murphy RF. Efficient modeling and active learning discovery of biological responses. Plos One. 8: e83996. PMID 24358322 DOI: 10.1371/Journal.Pone.0083996  0.058
1998 Gembitsky DS, Lovas S, Murphy RF. Development of a High Throughput Functional Assay for Structure-Activity Studies of Neurokinin A Analogs Journal of Biomolecular Screening. 3: 183-188. DOI: 10.1177/108705719800300304  0.058
2005 Chen X, Murphy RF. Objective clustering of proteins based on subcellular location patterns. Journal of Biomedicine & Biotechnology. 2005: 87-95. PMID 16046813 DOI: 10.1155/JBB.2005.87  0.058
2009 Ahmed A, Xing EP, Cohen WW, Murphy RF. Structured Correspondence Topic Models for Mining Captioned Figures in Biological Literature. Kdd : Proceedings / International Conference On Knowledge Discovery & Data Mining. International Conference On Knowledge Discovery & Data Mining. 2009: 39-48. PMID 25485170 DOI: 10.1145/1557019.1557031  0.058
2021 Cullen AA, Rajagopal A, Heintz K, Heise A, Murphy R, Sazanovich IV, Greetham GM, Towrie M, Long C, Fitzgerald-Hughes D, Pryce MT. Exploiting a Neutral BODIPY Copolymer as an Effective Agent for Photodynamic Antimicrobial Inactivation. The Journal of Physical Chemistry. B. PMID 33538173 DOI: 10.1021/acs.jpcb.0c09634  0.058
2010 Peng T, Bonamy GM, Glory-Afshar E, Rines DR, Chanda SK, Murphy RF. Determining the distribution of probes between different subcellular locations through automated unmixing of subcellular patterns. Proceedings of the National Academy of Sciences of the United States of America. 107: 2944-9. PMID 20133616 DOI: 10.1073/Pnas.0912090107  0.058
2018 Goldberg IJ, Reue K, Abumrad NA, Bickel PE, Cohen S, Fisher EA, Galis ZS, Granneman JG, Lewandowski ED, Murphy R, Olive M, Schaffer JE, Schwartz-Longacre L, Shulman GI, Walther TC, et al. Deciphering the Role of Lipid Droplets in Cardiovascular Disease: A Report From the 2017 National Heart, Lung, and Blood Institute Workshop. Circulation. 138: 305-315. PMID 30012703 DOI: 10.1161/Circulationaha.118.033704  0.058
2012 Li J, Shariff A, Wiking M, Lundberg E, Rohde GK, Murphy RF. Estimating microtubule distributions from 2D immunofluorescence microscopy images reveals differences among human cultured cell lines. Plos One. 7: e50292. PMID 23209697 DOI: 10.1371/Journal.Pone.0050292  0.058
2019 Walsh DP, Raftery RM, Castaño IM, Murphy R, Cavanagh B, Heise A, O'Brien FJ, Cryan SA. Transfection of autologous host cells in vivo using gene activated scaffolds incorporating star-polypeptides. Journal of Controlled Release : Official Journal of the Controlled Release Society. PMID 31075346 DOI: 10.1016/j.jconrel.2019.05.009  0.058
2008 Murphy RF. Automated Proteome-Wide Determination of Subcellular Location Using High Throughput Microscopy. Proceedings / Ieee International Symposium On Biomedical Imaging: From Nano to Macro. Ieee International Symposium On Biomedical Imaging. 2008: 308-311. PMID 20622996 DOI: 10.1109/ISBI.2008.4540994  0.058
2014 Kangas JD, Naik AW, Murphy RF. Efficient discovery of responses of proteins to compounds using active learning. Bmc Bioinformatics. 15: 143. PMID 24884564 DOI: 10.1186/1471-2105-15-143  0.058
2019 O'Callaghan PK, Freeman K, Davis LC, Murphy RF. A rare case of type 2 entrapment of the median nerve after posterior elbow dislocation with MRI and ultrasound correlation. Skeletal Radiology. PMID 30868233 DOI: 10.1007/s00256-019-03201-4  0.058
2010 Jacobs S, McCully CL, Murphy RF, Bacher J, Balis FM, Fox E. Extracellular fluid concentrations of cisplatin, carboplatin, and oxaliplatin in brain, muscle, and blood measured using microdialysis in nonhuman primates. Cancer Chemotherapy and Pharmacology. 65: 817-24. PMID 19662415 DOI: 10.1007/s00280-009-1085-7  0.058
2011 Peng T, Murphy RF. Image-derived, three-dimensional generative models of cellular organization. Cytometry. Part a : the Journal of the International Society For Analytical Cytology. 79: 383-91. PMID 21472848 DOI: 10.1002/cyto.a.21066  0.057
2007 García Osuna E, Hua J, Bateman NW, Zhao T, Berget PB, Murphy RF. Large-scale automated analysis of location patterns in randomly tagged 3T3 cells. Annals of Biomedical Engineering. 35: 1081-7. PMID 17285363 DOI: 10.1007/S10439-007-9254-5  0.057
1982 Van den Berg HW, Clarke R, Murphy RF. Failure of 5-fluorouracil and methotrexate to destroy the reproductive integrity of a human breast cancer cell line (MCF-7) growing in vitro. European Journal of Cancer & Clinical Oncology. 17: 1275-81. PMID 7200028 DOI: 10.1016/0014-2964(81)90008-6  0.057
2012 Palermo NY, Thomas P, Murphy RF, Lovas S. Hexapeptide fragment of carcinoembryonic antigen which acts as an agonist of heterogeneous ribonucleoprotein M. Journal of Peptide Science : An Official Publication of the European Peptide Society. 18: 252-60. PMID 22392880 DOI: 10.1002/Psc.2393  0.057
2009 Newberg J, Hua J, Murphy RF. Location proteomics: systematic determination of protein subcellular location. Methods in Molecular Biology (Clifton, N.J.). 500: 313-32. PMID 19399439 DOI: 10.1007/978-1-59745-525-1_11  0.057
2020 Shaw KA, Murphy RF, Devito DP, Mooney JF, Murphy JS. Diagnosis and Management of Common Conditions of the Pediatric Spine. Instructional Course Lectures. 69: 349-362. PMID 32017737  0.057
2007 Zhao T, Murphy RF. Automated learning of generative models for subcellular location: building blocks for systems biology. Cytometry. Part a : the Journal of the International Society For Analytical Cytology. 71: 978-90. PMID 17972315 DOI: 10.1002/cyto.a.20487  0.057
2014 Watters O, Pickering M, Murphy R, Murphy KJ, O'Connor JJ. Automated analysis of intracellular calcium fluorescence in rat organotypic hippocampal cultures: comparison to a manual, observer based method. Journal of Neuroscience Methods. 223: 20-9. PMID 24325985 DOI: 10.1016/J.Jneumeth.2013.11.021  0.056
1991 Nelson J, Stewart R, McGivern M, Bailie JR, Walker B, Murphy RF, Wilson DJ. Synthetic murine epidermal growth factor sequence 20-31 is mitogenic and angiogenic. Carcinogenesis. 12: 1823-9. PMID 1718617 DOI: 10.1093/CARCIN/12.10.1823  0.056
1990 Yasui A, Douglas AJ, Walker B, Magee DF, Murphy RF. Novel C-terminal gastrin antagonists. Synthesis and biological activity. International Journal of Peptide and Protein Research. 35: 301-5. PMID 2345051  0.056
2021 Sun H, Murphy RF. Evaluation of Categorical Matrix Completion Algorithms: Towards Improved Active Learning for Drug Discovery. Bioinformatics (Oxford, England). PMID 33983377 DOI: 10.1093/bioinformatics/btab322  0.056
2008 Rohde GK, Ribeiro AJ, Dahl KN, Murphy RF. Deformation-based nuclear morphometry: capturing nuclear shape variation in HeLa cells. Cytometry. Part a : the Journal of the International Society For Analytical Cytology. 73: 341-50. PMID 18163487 DOI: 10.1002/Cyto.A.20506  0.056
1990 Donnelly M, Nelson J, Walker B, Gray J, Murphy RF. Mitogenic activity of GRP18-27 analogues on the ZR-75-1 human breast cancer cell line. Biochemical Society Transactions. 18: 354. PMID 2379755 DOI: 10.1042/BST0180354  0.056
1999 Gembitsky DS, Murnin M, Otvös FL, Allen J, Murphy RF, Lovas S. Importance of the aromatic residue at position 6 of [Nle(10)]neurokinin A(4-10) for binding to the NK-2 receptor and receptor activation. Journal of Medicinal Chemistry. 42: 3004-7. PMID 10425111 DOI: 10.1021/Jm9807151  0.055
2019 Lugo-Martinez J, Bar-Joseph Z, Dengjel J, Murphy RF. Integration of Heterogeneous Experimental Data Improves Global Map of Human Protein Complexes. Acm-Bcb ... ... : the ... Acm Conference On Bioinformatics, Computational Biology and Biomedicine. Acm Conference On Bioinformatics, Computational Biology and Biomedicine. 2019: 144-153. PMID 32457940 DOI: 10.1145/3307339.3342150  0.055
2016 Murphy RF, Mooney JF. Complications following spine fusion for adolescent idiopathic scoliosis. Current Reviews in Musculoskeletal Medicine. PMID 27639726 DOI: 10.1007/s12178-016-9372-5  0.055
2007 Kou Z, Cohen WW, Murphy RF. A stacked graphical model for associating sub-images with sub-captions. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 257-68. PMID 17990497  0.055
2018 Ruan X, Murphy RF. Evaluation of methods for generative modeling of cell and nuclear shape. Bioinformatics (Oxford, England). PMID 30535313 DOI: 10.1093/bioinformatics/bty983  0.055
2010 Glory-Afshar E, Osuna-Highley E, Granger B, Murphy RF. A Graphical Model to Determine the Subcellular Protein Location in Artificial Tissues. Proceedings / Ieee International Symposium On Biomedical Imaging: From Nano to Macro. Ieee International Symposium On Biomedical Imaging. 2010: 1037-1040. PMID 21625289 DOI: 10.1109/ISBI.2010.5490167  0.055
2018 Thanacharoenpanich S, Boyle MJ, Murphy RF, Miller PE, Millis MB, Kim YJ, Yen YM. Periacetabular osteotomy for developmental hip dysplasia with labral tears: is arthrotomy or arthroscopy required? Journal of Hip Preservation Surgery. 5: 23-33. PMID 29423247 DOI: 10.1093/jhps/hnx048  0.054
1983 Chen MH, Joffe SN, Magee DF, Murphy RF, Naruse S. Cyclic changes of plasma pancreatic polypeptide and pancreatic secretion in fasting dogs. The Journal of Physiology. 341: 453-61. PMID 6620187  0.054
1985 Murphy RF, Chen MH, Herlin PM, Gallavan RH, Joffe SN, Fischer JE. Glucagon, secretin and vasoactive intestinal polypeptide immunoreactivities in rat gut after jejuno-ileal bypass and resection. Digestion. 32: 106-13. PMID 4043560 DOI: 10.1159/000199226  0.054
2019 Majarian TD, Cao-Berg I, Ruan X, Murphy RF. CellOrganizer: Learning and Using Cell Geometries for Spatial Cell Simulations. Methods in Molecular Biology (Clifton, N.J.). 1945: 251-264. PMID 30945250 DOI: 10.1007/978-1-4939-9102-0_11  0.054
2011 Shariff A, Murphy RF, Rohde GK. AUTOMATED ESTIMATION OF MICROTUBULE MODEL PARAMETERS FROM 3-D LIVE CELL MICROSCOPY IMAGES. Proceedings / Ieee International Symposium On Biomedical Imaging: From Nano to Macro. Ieee International Symposium On Biomedical Imaging. 2011: 1330-1333. PMID 21804927 DOI: 10.1109/ISBI.2011.5872646  0.054
2017 Ruan X, Wülfing C, Murphy RF. Image-based spatiotemporal causality inference for protein signaling networks. Bioinformatics (Oxford, England). 33: i217-i224. PMID 28881992 DOI: 10.1093/bioinformatics/btx258  0.054
1994 Smith DD, Conlon JM, Petzel J, Chen L, Murphy RF, Morley BJ. Solid-phase peptide synthesis and biological activity of bovine thymopoietin II (bTP-II). International Journal of Peptide and Protein Research. 44: 183-91. PMID 7982762  0.054
2022 Herbert C, Broach J, Heetderks W, Qashu F, Gibson L, Pretz C, Woods K, Kheterpal V, Suvarna T, Nowak C, Lazar P, Ayturk D, Barton B, Achenbach C, Murphy R, et al. At-Home Serial Testing Using Over-the-Counter SARS-CoV-2 Tests with a Digital Smartphone App for Assistance: Findings of feasibility from a longitudinal cohort study. Jmir Formative Research. PMID 36041004 DOI: 10.2196/35426  0.054
2007 Chen X, Murphy R. Robust classification of subcellular location patterns in high resolution 3D fluorescence microscope images. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2004: 1632-5. PMID 17272014 DOI: 10.1109/IEMBS.2004.1403494  0.054
2021 Kimmins SD, Hanay SB, Murphy R, O'Dwyer J, Ramalho J, Ryan EJ, Kearney CJ, O'Brien FJ, Cryan SA, Fitzgerald-Hughes D, Heise A. Antimicrobial and degradable triazolinedione (TAD) crosslinked polypeptide hydrogels. Journal of Materials Chemistry. B. PMID 34048521 DOI: 10.1039/d1tb00776a  0.054
2010 Murphy RF. Communicating subcellular distributions. Cytometry. Part a : the Journal of the International Society For Analytical Cytology. 77: 686-92. PMID 20552685 DOI: 10.1002/cyto.a.20933  0.054
2023 Diakite B, Kassogue Y, Maiga M, Dolo G, Kassogue O, Holl JL, Joyce B, Wang J, Cisse K, Diarra F, Keita ML, Traore CB, Kamate B, Sissoko SB, Coulibaly B, ... ... Murphy R, et al. Lack of Association of Methylenetetrahydrofolate Reductase Polymorphism with Breast Cancer Risk in Mali. Genetics Research. 2023: 4683831. PMID 36721432 DOI: 10.1155/2023/4683831  0.053
2023 Lu J, Veler A, Simonetti B, Raj T, Chou PH, Cross SJ, Phillips AM, Ruan X, Huynh L, Dowsey AW, Ye D, Murphy RF, Verkade P, Cullen PJ, Wülfing C. Five Inhibitory Receptors Display Distinct Vesicular Distributions in Murine T Cells. Cells. 12. PMID 37947636 DOI: 10.3390/cells12212558  0.053
2021 Aminpour P, Gray SA, Singer A, Scyphers SB, Jetter AJ, Jordan R, Murphy R, Grabowski JH. The diversity bonus in pooling local knowledge about complex problems. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 33495329 DOI: 10.1073/pnas.2016887118  0.053
2017 Ambler R, Ruan X, Murphy RF, Wülfing C. Systems Imaging of the Immune Synapse. Methods in Molecular Biology (Clifton, N.J.). 1584: 409-421. PMID 28255716 DOI: 10.1007/978-1-4939-6881-7_25  0.053
2023 Lu J, Veler A, Simonetti B, Raj T, Chou PH, Cross SJ, Phillips AM, Ruan X, Huynh L, Dowsey AW, Ye D, Murphy RF, Verkade P, Cullen PJ, Wülfing C. Five inhibitory receptors display distinct vesicular distributions in T cells. Biorxiv : the Preprint Server For Biology. PMID 37503045 DOI: 10.1101/2023.07.21.550019  0.053
1984 Jonung M, Berlatzky Y, Chen MH, Munda R, Banks IG, Brackett K, Murphy RF, Joffe SN. Appraisal of endocrine function of segmental autotransplanted pancreas in dogs. Acta Endocrinologica. 105: 72-7. PMID 6364668 DOI: 10.1530/ACTA.0.1050072  0.053
1987 Nelson J, Walker B, McGivern M, Murphy R. Cytotoxic effects of native epidermal growth factor (EGF) and a synthetic agonist on a human breast cancer cell line (MDA-MB-436). Regulatory Peptides. 18: 356. DOI: 10.1016/0167-0115(87)90220-5  0.052
2023 Reddin C, Ferguson J, Murphy R, Clarke A, Judge C, Griffith V, Alvarez A, Smyth A, Mente A, Yusuf S, O'Donnell MJ. Global mean potassium intake: a systematic review and Bayesian meta-analysis. European Journal of Nutrition. PMID 36882596 DOI: 10.1007/s00394-023-03128-6  0.052
1986 CLARKE R, MORWOOD J, NELSON J, VAN DEN BERG HW, MURPHY RF. The influence of vincristine on the oestrogen-binding capacity of two human breast cancer cell lines in vitro Biochemical Society Transactions. 14: 449-450. DOI: 10.1042/BST0140449  0.052
2007 García Osuna E, Murphy RF. Automated, systematic determination of protein subcellular location using fluorescence microscopy. Sub-Cellular Biochemistry. 43: 263-76. PMID 17953398  0.052
2021 Um S, Guo H, Thiengmag S, Benndorf R, Murphy R, Rischer M, Braga D, Poulsen M, de Beer ZW, Lackner G, Beemelmanns C. Comparative Genomic and Metabolic Analysis of sp. RB110 Morphotypes Illuminates Genomic Rearrangements and Formation of a New 46-Membered Antimicrobial Macrolide. Acs Chemical Biology. PMID 34275291 DOI: 10.1021/acschembio.1c00357  0.052
1988 Tenmoku S, Ottesen B, O'Hare MM, Sheikh S, Bardrum B, Hansen B, Walker B, Murphy RF, Schwartz TW. Interaction of NPY and VIP in regulation of myometrial blood flow and mechanical activity. Peptides. 9: 269-75. PMID 3375135 DOI: 10.1016/0196-9781(88)90259-8  0.052
2008 Qian Y, Murphy RF. Improved recognition of figures containing fluorescence microscope images in online journal articles using graphical models. Bioinformatics (Oxford, England). 24: 569-76. PMID 18033795 DOI: 10.1093/bioinformatics/btm561  0.052
1995 Walker B, Gray J, Burns DM, Wang Q, Adrian TE, Nichols DH, Murphy RF, Nelson J. Carboxyfluorescein and biotin neuromedin C analogues: synthesis and applications. Peptides. 16: 255-61. PMID 7540292 DOI: 10.1016/0196-9781(94)00174-X  0.052
1984 Murphy RF, Balasubramaniam A, Chen MH, Cardin AD, Rayford PL, Jackson RL, Joffe SN. Specificity of cholecystokinin antibody may influence choice of tracer for radioimmunoassay. Journal of Immunological Methods. 74: 199-203. PMID 6501886 DOI: 10.1016/0022-1759(84)90381-8  0.052
2005 Zhao T, Velliste M, Boland MV, Murphy RF. Object type recognition for automated analysis of protein subcellular location. Ieee Transactions On Image Processing : a Publication of the Ieee Signal Processing Society. 14: 1351-9. PMID 16190470 DOI: 10.1109/TIP.2005.852456  0.051
1988 McKillop JM, Foy WL, Johnston CF, Shaw C, Murphy RF, Buchanan KD. Gastrin-releasing peptide (GRP) immunoreactivity in the rat retina: a radioimmunoassay, immunohistochemical and chromatographic study. Brain Research. 447: 239-45. PMID 3390695 DOI: 10.1016/0006-8993(88)91125-0  0.051
2009 Huh S, Lee D, Murphy RF. Efficient framework for automated classification of subcellular patterns in budding yeast. Cytometry. Part a : the Journal of the International Society For Analytical Cytology. 75: 934-40. PMID 19753630 DOI: 10.1002/Cyto.A.20793  0.051
2007 Ötvös F, Gembitsky DS, Murphy RF, Lovas S. Synthesis and structure-activity relationship of [Nle10] neurokinin A (4-10) analogs with constraint in the backbone and at position six International Journal of Peptide Research and Therapeutics. 13: 329-336. DOI: 10.1007/S10989-007-9087-Y  0.051
2018 Barbier M, Bottelbergs A, Nuydens R, Ebneth A, De Vos WH, Murphy R. SliceMap: an algorithm for automated brain region annotation. Bioinformatics (Oxford, England). 34: 718-720. PMID 29048461 DOI: 10.1093/bioinformatics/btx658  0.051
2014 Shanahan M, Fleming P, Nocera M, Sullivan K, Murphy R, Zolotor A. Process evaluation of a statewide abusive head trauma prevention program. Evaluation and Program Planning. 47: 18-25. PMID 25084513 DOI: 10.1016/J.Evalprogplan.2014.07.002  0.051
2021 McDonald TC, Heffernan MJ, Ramo B, Haber L, Sheffer B, Murphy J, Murphy R, Fletcher N, Coyne K, Lubicky J, Bumpass DB, Crawford C, Carreon L, Toner S, Stafford WH, et al. Surgical Outcomes of Obese Patients With Adolescent Idiopathic Scoliosis From Endemic Areas of Obesity in the United States. Journal of Pediatric Orthopedics. PMID 34469396 DOI: 10.1097/BPO.0000000000001958  0.051
2020 Ramírez-Reyes T, Blair C, Flores-Villela O, Piñero D, Lathrop A, Murphy R. Phylogenomics and molecular species delimitation reveals great cryptic diversity of leaf-toed geckos (Phyllodactylidae: Phyllodactylus), ancient origins, and diversification in Mexico. Molecular Phylogenetics and Evolution. 106880. PMID 32512192 DOI: 10.1016/J.Ympev.2020.106880  0.05
2019 Murphy RF, Heyworth B, Kramer D, Naqvi M, Miller PE, Yen YM, Kocher MS, Shore BJ. Symptomatic Venous Thromboembolism After Adolescent Knee Arthroscopy. Journal of Pediatric Orthopedics. 39: 125-129. PMID 30730416 DOI: 10.1097/BPO.0000000000000894  0.05
2016 Murphy RF, Heyworth B, Kramer D, Naqvi M, Miller PE, Yen YM, Kocher MS, Shore BJ. Symptomatic Venous Thromboembolism After Adolescent Knee Arthroscopy. Journal of Pediatric Orthopedics. PMID 27861210 DOI: 10.1097/BPO.0000000000000894  0.05
2009 Copps J, Murphy RF, Lovas S. The structure of bioactive analogs of the N-terminal region of gastrin-17. Peptides. 30: 2250-62. PMID 19766682 DOI: 10.1016/j.peptides.2009.09.016  0.05
2008 Hendee WR, Cleary K, Ehman RL, Fullerton GD, Grundfest WS, Haller J, Kelley C, Meyer AE, Murphy RF, Phillips W, Torchilin VP. Bioengineering and imaging research opportunities workshop V: a summary. Annals of Biomedical Engineering. 36: 1315-21. PMID 18612827 DOI: 10.1007/S10439-008-9529-5  0.05
2010 Shariff A, Murphy RF, Rohde GK. A generative model of microtubule distributions, and indirect estimation of its parameters from fluorescence microscopy images. Cytometry. Part a : the Journal of the International Society For Analytical Cytology. 77: 457-66. PMID 20104579 DOI: 10.1002/Cyto.A.20854  0.05
2020 Ambler R, Edmunds GL, Tan SL, Cirillo S, Pernes JI, Ruan X, Huete-Carrasco J, Wong CCW, Lu J, Ward J, Toti G, Hedges AJ, Dovedi SJ, Murphy RF, Morgan DJ, et al. PD-1 suppresses the maintenance of cell couples between cytotoxic T cells and target tumor cells within the tumor. Science Signaling. 13. PMID 32934075 DOI: 10.1126/scisignal.aau4518  0.05
2004 Singh B, Roginsky A, Ding X, Murphy R, Talamonti M, Bell R, Adrian T. CHANGES IN EXPRESSION OF CELL CYCLE-ASSOCIATED GENES ACCOMPANY RETINOIC ACID-INDUCED GROWTH ARREST IN PANCREATIC CANCER CELLS. Pancreas. 29: 334. DOI: 10.1097/00006676-200411000-00044  0.05
2015 Murphy RF, Vuillermin C, Naqvi M, Miller PE, Bae DS, Shore B. Early Outcomes of Pediatric Elbow Dislocation-Risk Factors Associated With Morbidity. Journal of Pediatric Orthopedics. PMID 26536011 DOI: 10.1097/BPO.0000000000000676  0.05
1987 Roederer M, Murphy RF. Cell-by-cell autofluorescence correction for low signal-to-noise systems: application to epidermal growth factor endocytosis by 3T3 fibroblasts. Cytometry. 7: 558-65. PMID 3096673 DOI: 10.1002/CYTO.990070610  0.05
2010 Shariff A, Kangas J, Coelho LP, Quinn S, Murphy RF. Automated image analysis for high-content screening and analysis. Journal of Biomolecular Screening. 15: 726-34. PMID 20488979 DOI: 10.1177/1087057110370894  0.05
2013 Stadler C, Rexhepaj E, Singan VR, Murphy RF, Pepperkok R, Uhlén M, Simpson JC, Lundberg E. Immunofluorescence and fluorescent-protein tagging show high correlation for protein localization in mammalian cells. Nature Methods. 10: 315-23. PMID 23435261 DOI: 10.1038/nmeth.2377  0.05
2006 Copps J, Murphy RF, Lovas S. Avian pancreatic polypeptide fragments refold to native aPP conformation when combined in solution: A CD and VCD study Biopolymers. 83: 32-38. PMID 16628551 DOI: 10.1002/bip.20524  0.049
2009 Peng T, Wang W, Rohde GK, Murphy RF. Instance-Based Generative Biological Shape Modeling. Proceedings / Ieee International Symposium On Biomedical Imaging: From Nano to Macro. Ieee International Symposium On Biomedical Imaging. 5193141: 690-693. PMID 20628550 DOI: 10.1109/ISBI.2009.5193141  0.049
2019 O'Dwyer J, Murphy R, Dolan EB, Kovarova L, Pravda M, Velebny V, Heise A, Duffy GP, Cryan SA. Development of a nanomedicine-loaded hydrogel for sustained delivery of an angiogenic growth factor to the ischaemic myocardium. Drug Delivery and Translational Research. PMID 31691161 DOI: 10.1007/s13346-019-00684-5  0.049
2004 Hu Y, Murphy RF. Automated interpretation of subcellular patterns from immunofluorescence microscopy. Journal of Immunological Methods. 290: 93-105. PMID 15261574 DOI: 10.1016/j.jim.2004.04.011  0.049
2015 Temerinac-Ott M, Naik AW, Murphy RF. Deciding when to stop: efficient experimentation to learn to predict drug-target interactions. Bmc Bioinformatics. 16: 213. PMID 26153434 DOI: 10.1186/s12859-015-0650-9  0.049
2005 Ahmed S, Murphy RF, Lovas S. Importance of N- and C-terminal regions of gastrin-Gly for preferential binding to high and low affinity gastrin-Gly receptors. Peptides. 26: 1207-12. PMID 15949639 DOI: 10.1016/J.Peptides.2005.02.001  0.049
2021 Murphy R, Benndorf R, de Beer ZW, Vollmers J, Kaster AK, Beemelmanns C, Poulsen M. Comparative Genomics Reveals Prophylactic and Catabolic Capabilities of within the Fungus-Farming Termite Symbiosis. Msphere. 6. PMID 33658277 DOI: 10.1128/mSphere.01233-20  0.049
1987 CREMIN M, CLARKE R, NELSON J, MURPHY RF. The response of human breast cancer cells to glucagon Biochemical Society Transactions. 15: 241-242. DOI: 10.1042/BST0150241  0.049
2002 Chass GA, Lovas S, Murphy RF, Csizmadia IG. The role of enhanced aromatic π-electron donating aptitude of the tyrosyl sidechain with respect to that of phenylalanyl in intramolecular interactions European Physical Journal D. 20: 481-497. DOI: 10.1140/Epjd/E2002-00155-6  0.049
2024 Shahzad V, McDonald K, Murphy R, O'Meara Y. Unilateral renal cortical necrosis. Radiology Case Reports. 19: 2483-2486. PMID 38577129 DOI: 10.1016/j.radcr.2024.02.108  0.049
1993 Pete MJ, Conlon JM, Murphy RF. Isolation and primary structure of a potent toxin from the venom of the scorpion Centruroides sculpturatus Ewing. International Journal of Peptide and Protein Research. 40: 582-6. PMID 1286943 DOI: 10.1111/J.1399-3011.1992.TB00444.X  0.049
1983 Kennedy DG, Clarke R, van den Berg HW, Murphy RF. The kinetics of methotrexate polyglutamate formation and efflux in a human breast cancer cell line (MDA.MB.436): the effect of insulin. Biochemical Pharmacology. 32: 41-6. PMID 6187348 DOI: 10.1016/0006-2952(83)90649-4  0.049
2020 Murphy RF, Williams D, Hogue GD, Spence DD, Epps H, Chambers HG, Shore BJ. Prophylaxis for Pediatric Venous Thromboembolism: Current Status and Changes Across Pediatric Orthopaedic Society of North America From 2011. The Journal of the American Academy of Orthopaedic Surgeons. PMID 32011545 DOI: 10.5435/JAAOS-D-19-00578  0.049
2008 Csontos J, Kálmán P, Tasi G, Kálmán M, Murphy RF, Lovas S. The effect of electron correlation on the conformational space of melatonin. Journal of Computational Chemistry. 29: 1466-71. PMID 18270961 DOI: 10.1002/jcc.20907  0.049
2011 Lin TH, Murphy RF, Bar-Joseph Z. Discriminative motif finding for predicting protein subcellular localization. Ieee/Acm Transactions On Computational Biology and Bioinformatics / Ieee, Acm. 8: 441-51. PMID 21233524 DOI: 10.1109/Tcbb.2009.82  0.048
1999 Körtvélyesi T, Murphy RF, Lovas S. Secondary structures and intramolecular interactions in fragments of the B-loops of naturally occurring analogs of epidermal growth factor. Journal of Biomolecular Structure & Dynamics. 17: 393-407. PMID 10563587 DOI: 10.1080/07391102.1999.10508370  0.048
2003 Borics A, Murphy RF, Lovas S. Fourier transform vibrational circular dichroism as a decisive tool for conformational studies of peptides containing tyrosyl residues. Biopolymers. 72: 21-4. PMID 12400088 DOI: 10.1002/Bip.10247  0.048
2024 Post LA, Wu SA, Soetikno AG, Ozer E, Liu Y, Welch SB, Hawkins C, Moss C, Murphy R, Mason M, Havey RJ, Lundberg A. Latin America and the Caribbean: Updated Surveillance Metrics and History of the COVID-19 Pandemic (2020-2023). Jmir Public Health and Surveillance. PMID 38568194 DOI: 10.2196/44398  0.048
2015 Murphy RF, Glotzbecker MP, Hresko MT, Hedequist D. Allograft Bone Use in Pediatric Subaxial Cervical Spine Fusions. Journal of Pediatric Orthopedics. PMID 26600298 DOI: 10.1097/BPO.0000000000000691  0.048
2021 O'Dwyer J, Murphy R, González-Vázquez A, Kovarova L, Pravda M, Velebny V, Heise A, Duffy GP, Cryan SA. Translational Studies on the Potential of a VEGF Nanoparticle-Loaded Hyaluronic Acid Hydrogel. Pharmaceutics. 13. PMID 34067451 DOI: 10.3390/pharmaceutics13060779  0.048
1986 Gallavan RH, Shaw C, Murphy RF, Buchanan KD, Joffe SN, Jacobson ED. Effects of micellar oleic acid on canine jejunal blood flow and neurotensin release. The American Journal of Physiology. 251: G649-55. PMID 3777170 DOI: 10.1152/AJPGI.1986.251.5.G649  0.048
2018 Reyes JD, Sharkey AT, Morrison L, Costello M, Crowe C, Murphy R, O'Keeffe ST, Mulkerrin EC. Effectiveness of a multifaceted intervention to reduce night-time sedative use in a rehabilitation unit: a pre-post intervention study. Age and Ageing. PMID 29757346 DOI: 10.1093/ageing/afy075  0.048
2024 Chen H, Murphy RF. 3DCellComposer - A Versatile Pipeline Utilizing 2D Cell Segmentation Methods for 3D Cell Segmentation. Biorxiv : the Preprint Server For Biology. PMID 38559093 DOI: 10.1101/2024.03.08.584082  0.048
2007 Singh B, Murphy RF, Ding XZ, Roginsky AB, Bell RH, Adrian TE. On the role of transforming growth factor-beta in the growth inhibitory effects of retinoic acid in human pancreatic cancer cells. Molecular Cancer. 6: 82. PMID 18157915 DOI: 10.1186/1476-4598-6-82  0.048
2021 Kim JJ, Bax DV, Murphy R, Best SM, Cameron RE. Collagen Film Activation with Nanoscale IKVAV-Capped Dendrimers for Selective Neural Cell Response. Nanomaterials (Basel, Switzerland). 11. PMID 33925197 DOI: 10.3390/nano11051157  0.048
2004 Huang K, Murphy RF. From quantitative microscopy to automated image understanding. Journal of Biomedical Optics. 9: 893-912. PMID 15447010 DOI: 10.1117/1.1779233  0.048
2009 Boysen JH, Fanning S, Newberg J, Murphy RF, Mitchell AP. Detection of protein-protein interactions through vesicle targeting. Genetics. 182: 33-9. PMID 19307607 DOI: 10.1534/Genetics.109.101162  0.048
2007 Copps J, Ahmed S, Murphy RF, Lovas S. Gastrin 1-6 promotes growth of colon cancer cells through non-CCK receptors. Peptides. 28: 632-5. PMID 17126952 DOI: 10.1016/j.peptides.2006.10.008  0.048
2015 Murphy RF, Hedequist D. Excision of Symptomatic Spinous Process Nonunion in Adolescent Athletes. American Journal of Orthopedics (Belle Mead, N.J.). 44: 515-7. PMID 26566552  0.047
2001 Boland MV, Murphy RF. Multivariate analysis. Current Protocols in Cytometry / Editorial Board, J. Paul Robinson, Managing Editor ... [Et Al.]. Unit 10.8. PMID 18770682 DOI: 10.1002/0471142956.cy1008s03  0.047
2009 Coelho LP, Shariff A, Murphy RF. NUCLEAR SEGMENTATION IN MICROSCOPE CELL IMAGES: A HAND-SEGMENTED DATASET AND COMPARISON OF ALGORITHMS. Proceedings / Ieee International Symposium On Biomedical Imaging: From Nano to Macro. Ieee International Symposium On Biomedical Imaging. 5193098: 518-521. PMID 20628545 DOI: 10.1109/ISBI.2009.5193098  0.047
1987 Werther GA, Sperling MA, Joffe S, Murphy RF. The regulation of basal pancreatic polypeptide levels in dogs. Regulatory Peptides. 17: 191-8. PMID 2884699 DOI: 10.1016/0167-0115(87)90062-0  0.047
2023 Duffy M, Lynch A, Reddin C, Judge C, O'Donnell M, Murphy R. Comparing functional and quality of life outcomes in transcatheter aortic valve implantation and surgical aortic valve replacement for aortic stenosis: a systematic review and meta-analysis. Bmc Cardiovascular Disorders. 23: 519. PMID 37880616 DOI: 10.1186/s12872-023-03445-y  0.047
2016 Naik AW, Kangas JD, Sullivan DP, Murphy RF. Active machine learning-driven experimentation to determine compound effects on protein patterns. Elife. 5. PMID 26840049 DOI: 10.7554/eLife.10047  0.047
2008 Hendee WR, Cleary K, Ehman RL, Fullerton GD, Grundfest WS, Haller J, Kelley CA, Meyer AE, Murphy RF, Phillips W, Torchilin VP. Bioengineering and Imaging Research Opportunities Workshop V: a summary on Imaging and Characterizing Structure and Function in Native and Engineered Tissues. Cytometry. Part a : the Journal of the International Society For Analytical Cytology. 73: 779-84. PMID 18677767 DOI: 10.1002/Cyto.A.20568  0.047
1986 NELSON J, CLARKE R, DICKSON GR, VAN DEN BERG HW, MURPHY RF. The effects of Mg2+ or EDTA on the subcellular distribution of unoccupied oestrogen receptor in ZR-75-1 and MCF-7 cells Biochemical Society Transactions. 14: 447-447. DOI: 10.1042/BST0140447  0.047
2005 Banks JL, Beard HS, Cao Y, Cho AE, Damm W, Farid R, Felts AK, Halgren TA, Mainz DT, Maple JR, Murphy R, Philipp DM, Repasky MP, Zhang LY, Berne BJ, et al. Integrated Modeling Program, Applied Chemical Theory (IMPACT). Journal of Computational Chemistry. 26: 1752-80. PMID 16211539 DOI: 10.1002/Jcc.20292  0.046
2008 Hendee W, Cleary K, Ehman R, Fullerton G, Grundfest W, Haller J, Kelley C, Meyer A, Murphy RF, Phillips W, Torchilin V. Bioengineering and Imaging Research Opportunities Workshop V: a white paper on imaging and characterizing structure and function in native and engineered tissues. Medical Physics. 35: 3428-35. PMID 18777902 DOI: 10.1118/1.2948317  0.046
2023 Mulligan MD, Murphy R, Reddin C, Judge C, Ferguson J, Alvarez-Iglesias A, McGrath ER, O'Donnell MJ. Population attributable fraction of hypertension for dementia: global, regional, and national estimates for 186 countries. Eclinicalmedicine. 60: 102012. PMID 37261323 DOI: 10.1016/j.eclinm.2023.102012  0.046
1986 Jackson RL, Balasubramaniam A, Murphy RF, Demel RA. Interaction of synthetic peptides of apolipoprotein C-II and lipoprotein lipase at monomolecular lipid films. Biochimica Et Biophysica Acta. 875: 203-10. PMID 3942762 DOI: 10.1016/0005-2760(86)90169-4  0.046
2010 Coelho LP, Peng T, Murphy RF. Quantifying the distribution of probes between subcellular locations using unsupervised pattern unmixing. Bioinformatics (Oxford, England). 26: i7-12. PMID 20529939 DOI: 10.1093/bioinformatics/btq220  0.046
2019 Clark DJ, McMillan LE, Tan SL, Bellomo G, Massoue C, Thompson H, Mykhaylechko L, Alibhai D, Ruan X, Singleton KL, Du M, Hedges A, Schwartzberg PL, Verkade P, Murphy RF, et al. Transient protein accumulation at the center of the T cell antigen-presenting cell interface drives efficient IL-2 secretion. Elife. 8. PMID 31663508 DOI: 10.7554/eLife.45789  0.046
2023 Herbert C, Wang B, Lin H, Hafer N, Pretz C, Stamegna P, Tarrant S, Hartin P, Ferranto J, Behar S, Wright C, Orwig T, Suvarna T, Harman E, Schrader S, ... ... Murphy R, et al. Performance of Rapid Antigen Tests Based on Symptom Onset and Close Contact Exposure: A secondary analysis from the Test Us At Home prospective cohort study. Medrxiv : the Preprint Server For Health Sciences. PMID 36865199 DOI: 10.1101/2023.02.21.23286239  0.046
2008 Kendrick D, Stewart J, Coupland C, Hayes M, Hopkins N, McCabe D, Murphy R, O'Donnell G, Phillips C, Radford D, Ryan J, Smith S, Groom L, Towner E. Randomised controlled trial of thermostatic mixer valves in reducing bath hot tap water temperature in families with young children in social housing: a protocol. Trials. 9: 14. PMID 18348736 DOI: 10.1186/1745-6215-9-14  0.046
2021 Walsh DP, Raftery RM, Murphy R, Chen G, Heise A, O'Brien FJ, Cryan SA. Gene activated scaffolds incorporating star-shaped polypeptide-pDNA nanomedicines accelerate bone tissue regeneration . Biomaterials Science. PMID 34086016 DOI: 10.1039/d1bm00094b  0.046
2024 Sun H, Li J, Murphy RF. Expanding the coverage of spatial proteomics: a machine learning approach. Bioinformatics (Oxford, England). PMID 38310340 DOI: 10.1093/bioinformatics/btae062  0.046
2004 Ahmed S, Budai B, Herédi-Szabó K, Farkas J, Tóth G, Murphy RF, Lovas S. High and low affinity receptors mediate growth effects of gastrin and gastrin-Gly on DLD-1 human colonic carcinoma cells. Febs Letters. 556: 199-203. PMID 14706850 DOI: 10.1016/S0014-5793(03)01408-X  0.046
2022 Diakité MT, Diakité B, Koné A, Balam S, Fofana D, Diallo D, Kassogué Y, Traoré CB, Kamaté B, Ba D, Ly M, Ba M, Koné B, Maiga AI, Achenbach C, ... ... Murphy R, et al. Relationships between gut microbiota, red meat consumption and colorectal cancer. Journal of Carcinogenesis & Mutagenesis. 13. PMID 37206892  0.046
2007 Chen SC, Zhao T, Gordon GJ, Murphy RF. Automated image analysis of protein localization in budding yeast. Bioinformatics (Oxford, England). 23: i66-71. PMID 17646347 DOI: 10.1093/bioinformatics/btm206  0.046
1988 Magee DF, Murphy RF, Naruse S. The relationship between blood gastrin levels and gastric secretion in conscious dogs. Journal of Autonomic Pharmacology. 8: 311-8. PMID 3075611  0.046
1989 Conlon JM, Deacon CF, Grimelius L, Cedermark B, Murphy RF, Thim L, Creutzfeldt W. Neuropeptide K-(1-24)-peptide: storage and release by carcinoid tumors. Peptides. 9: 859-66. PMID 3226960 DOI: 10.1016/0196-9781(88)90134-9  0.045
2023 Fares N, Levey ST, Ashy C, McFadden R, Barfield W, Murphy RF, Dow MA, Van Nortwick SS. Intraoperative Radiation Exposure in Adolescent Idiopathic and Neuromuscular Scoliosis. Journal of Pediatric Orthopedics. PMID 37822208 DOI: 10.1097/BPO.0000000000002547  0.045
1987 McCann SR, Farrell D, McDonnell S, Neenan S, Moriarty M, Lynch V, Kelehan P, Clynes M, O’Boyle C, Herity B, Hilliard N, Houston RF, Cremin M, Clarke R, Nelson J, ... Murphy RF, et al. Irish association for cancer research Proceedings of 23rd Annual Meeting held in Cork, May, 1966 Irish Journal of Medical Science. 156: 253-256. DOI: 10.1007/BF02954059  0.045
2012 Eliceiri KW, Berthold MR, Goldberg IG, Ibáñez L, Manjunath BS, Martone ME, Murphy RF, Peng H, Plant AL, Roysam B, Stuurman N, Stuurmann N, Swedlow JR, Tomancak P, Carpenter AE. Biological imaging software tools. Nature Methods. 9: 697-710. PMID 22743775 DOI: 10.1038/Nmeth.2084  0.045
2006 Chen SC, Gordon GJ, Murphy RF. A novel approximate inference approach to automated classification of protein subcellular location patterns in multi-cell images 2006 3rd Ieee International Symposium On Biomedical Imaging: From Nano to Macro - Proceedings. 2006: 558-561.  0.045
2015 Goldfeld DA, Murphy R, Kim B, Wang L, Beuming T, Abel R, Friesner RA. Docking and free energy perturbation studies of ligand binding in the kappa opioid receptor. The Journal of Physical Chemistry. B. 119: 824-35. PMID 25395044 DOI: 10.1021/Jp5053612  0.045
1982 Kulneff-Herlin A, Herlin P, Chen MH, Gimmon Z, Murphy RF, Joffe SN. Circulating immunoreactivities of gastrin, glucagon and VIP after jejuno-ileal bypass. Peptides. 3: 91-3. PMID 7079193 DOI: 10.1016/0196-9781(82)90148-6  0.045
2006 Chaudhari BR, Murphy RF, Agrawal DK. Following the TRAIL to apoptosis Immunologic Research. 35: 249-262. PMID 17172650 DOI: 10.1385/IR:35:3:249  0.044
2010 Hu Y, Osuna-Highley E, Hua J, Nowicki TS, Stolz R, McKayle C, Murphy RF. Automated analysis of protein subcellular location in time series images. Bioinformatics (Oxford, England). 26: 1630-6. PMID 20484328 DOI: 10.1093/bioinformatics/btq239  0.044
2017 Gretzmeier C, Eiselein S, Johnson GR, Engelke R, Nowag H, Zarei M, Küttner V, Becker AC, Rigbolt KTG, Høyer-Hansen M, Andersen JS, Münz C, Murphy RF, Dengjel J. Degradation of protein translation machinery by amino acid starvation-induced macroautophagy. Autophagy. 0. PMID 28453381 DOI: 10.1080/15548627.2016.1274485  0.044
2019 Bapputty R, Talahalli R, Zarini S, Samuels I, Murphy R, Gubitosi-Klug R. Montelukast Prevents Early Diabetic Retinopathy in Mice. Diabetes. PMID 31350303 DOI: 10.2337/Db19-0026  0.044
2023 Sinha NJ, Cunha KC, Murphy R, Hawker CJ, Shea JE, Helgeson ME. Competition between β-Sheet and Coacervate Domains Yields Diverse Morphologies in Mixtures of Oppositely Charged Homochiral Polypeptides. Biomacromolecules. PMID 37486022 DOI: 10.1021/acs.biomac.3c00361  0.044
2001 Watts CR, Mezei M, Murphy RF, Lovas S. Conformational space comparison of GnRH and lGnRH-III using molecular dynamics, cluster analysis and Monte Carlo thermodynamic integration. Journal of Biomolecular Structure & Dynamics. 18: 733-48. PMID 11334110 DOI: 10.1080/07391102.2001.10506703  0.044
2021 Murphy R, Kordbacheh S, Skoulas D, Ng S, Suthiwanich K, Kasko AM, Cryan SA, Fitzgerald-Hughes D, Khademhosseini A, Sheikhi A, Heise A. Three-dimensionally printable shear-thinning triblock copolypeptide hydrogels with antimicrobial potency. Biomaterials Science. PMID 34236349 DOI: 10.1039/d1bm00275a  0.044
1988 Magee DF, Murphy RF, Naruse S. Relationship of periodic pancreatic secretion and gallbladder contraction to plasma cholecystokinin in dogs. Irish Journal of Medical Science. 157: 261-4. PMID 3170154 DOI: 10.1007/BF02948283  0.044
2012 Li J, Newberg JY, Uhlén M, Lundberg E, Murphy RF. Automated analysis and reannotation of subcellular locations in confocal images from the Human Protein Atlas. Plos One. 7: e50514. PMID 23226299 DOI: 10.1371/Journal.Pone.0050514  0.044
2022 Soni A, Herbert C, Filippaios A, Broach J, Colubri A, Fahey N, Woods K, Nanavati J, Wright C, Orwig T, Gilliam K, Kheterpal V, Suvarna T, Nowak C, Schrader S, ... ... Murphy R, et al. Comparison of Rapid Antigen Tests' Performance between Delta (B.1.61.7; AY.X) and Omicron (B.1.1.529; BA1) Variants of SARS-CoV-2: Secondary Analysis from a Serial Home Self-Testing Study. Medrxiv : the Preprint Server For Health Sciences. PMID 35262091 DOI: 10.1101/2022.02.27.22271090  0.044
1991 Nelson J, Donnelly M, Walker B, Gray J, Shaw C, Murphy RF. Bombesin stimulates proliferation of human breast cancer cells in culture. British Journal of Cancer. 63: 933-6. PMID 2069848 DOI: 10.1038/bjc.1991.204  0.043
1986 Balasubramaniam A, Demel RA, Murphy RF, Sparrow JT, Jackson RL. Substitution of Ser61----Gly61 in human apolipoprotein C-II does not alter its activation of lipoprotein lipase. Chemistry and Physics of Lipids. 39: 341-6. PMID 3089635 DOI: 10.1016/0009-3084(86)90115-5  0.043
1991 Shaw C, Murphy R, Thim L, Furness JB, Buchanan KD. Marsupial possum neurotensin: a unique mammalian regulatory peptide exhibiting structural homology to the avian analogue. Regulatory Peptides. 35: 49-57. PMID 1924896 DOI: 10.1016/0167-0115(91)90253-D  0.043
2010 Ahmed A, Arnold A, Coelho LP, Kangas J, Sheikh AS, Xing E, Cohen W, Murphy RF. Structured Literature Image Finder: Parsing Text and Figures in Biomedical Literature. Web Semantics (Online). 8: 151-154. PMID 24991197 DOI: 10.1016/J.Websem.2010.04.002  0.043
2013 Roybal KT, Sinai P, Verkade P, Murphy RF, Wülfing C. The actin-driven spatiotemporal organization of T-cell signaling at the system scale. Immunological Reviews. 256: 133-47. PMID 24117818 DOI: 10.1111/imr.12103  0.043
2016 Murphy RF, Nunez L, Barfield WR, Mooney JF. Evaluation of Pediatric Questions on the Orthopaedic In-Training Examination-An Update. Journal of Pediatric Orthopedics. PMID 27977498 DOI: 10.1097/BPO.0000000000000913  0.043
2013 Coelho LP, Kangas JD, Naik AW, Osuna-Highley E, Glory-Afshar E, Fuhrman M, Simha R, Berget PB, Jarvik JW, Murphy RF. Determining the subcellular location of new proteins from microscope images using local features. Bioinformatics (Oxford, England). 29: 2343-9. PMID 23836142 DOI: 10.1093/Bioinformatics/Btt392  0.043
1994 Bailie JR, Walker B, Nelson J, Murphy RF. Synthesis of a cyclic analogue of the C-loop region of epidermal growth factor, containing 1-aminocyclopropane-1-carboxylic acid. International Journal of Peptide and Protein Research. 43: 225-9. PMID 8005744 DOI: 10.1111/J.1399-3011.1994.TB00384.X  0.043
2023 Prior A, Hardesty CK, Emans JB, Thompson GH, Sponseller PD, Smith JT, Skaggs DL, Vaughan M, Barfield WR, Murphy RF. A Comparative Analysis of Revision Surgery Before or After 2 Years After Graduation From Growth-friendly Surgery for Early Onset Scoliosis. Journal of Pediatric Orthopedics. PMID 37400093 DOI: 10.1097/BPO.0000000000002467  0.043
2023 McCarthy CE, McAteer CA, Murphy R, McDermott C, Costello M, O'Donnell M. Behavioral Sleep Interventions and Cardiovascular Risk Factors: Systematic Review and Meta-analysis of Randomized Controlled Trials. The Journal of Cardiovascular Nursing. PMID 37556345 DOI: 10.1097/JCN.0000000000001018  0.043
2018 Murphy R, Walsh DP, Hamilton CA, Cryan SA, In Het Panhuis M, Heise A. Degradable 3D Printed Hydrogels Based on Star Shaped Copolypeptides. Biomacromolecules. PMID 29665336 DOI: 10.1021/acs.biomac.8b00299  0.042
1987 CLARKE R, VAN DEN BERG HW, NELSON J, MURPHY RF. Pharmacological and suprapharmacological concentrations of both 17β-oestradiol and tamoxifen reduce the membrane fluidity of MCF-7 and MDA-MB-436 human breast cancer cells Biochemical Society Transactions. 15: 243-244. DOI: 10.1042/BST0150243  0.042
1987 Murphy R. Comparative endocrinology: developments and directions Febs Letters. 210: 110-110. DOI: 10.1016/0014-5793(87)81313-3  0.042
2022 Soni A, Herbert C, Filippaios A, Broach J, Colubri A, Fahey N, Woods K, Nanavati J, Wright C, Orwig T, Gilliam K, Kheterpal V, Suvarna T, Nowak C, Schrader S, ... ... Murphy R, et al. Comparison of Rapid Antigen Tests' Performance Between Delta and Omicron Variants of SARS-CoV-2 : A Secondary Analysis From a Serial Home Self-testing Study. Annals of Internal Medicine. PMID 36215709 DOI: 10.7326/M22-0760  0.042
1986 Doyle CT, McCann JP, Ardill JES, Johnston CF, McKee CM, Stevenson HM, Gibbons JR, Buchanan KD, Collins PB, Johnson AH, Duignan JP, Brady K, Bouchier-Hayes D, Reynolds M, McCann SR, ... ... Murphy RF, et al. Proceedings of meeting of Irish Association for Cancer Research May 16/17, 1985 Irish Journal of Medical Science. 155: 170-177. DOI: 10.1007/BF02939855  0.042
2019 Xu YY, Shen HB, Murphy RF. Learning complex subcellular distribution patterns of proteins via analysis of immunohistochemistry images. Bioinformatics (Oxford, England). PMID 31722369 DOI: 10.1093/bioinformatics/btz844  0.042
1992 Abu Shanab AA, Allen JM, Guthrie DJ, Irvine GB, Murphy RF, Walker B. Effects of some neurokinin A analogues on tachykinin-induced contraction of guinea pig trachea. Peptides. 12: 1069-75. PMID 1666182 DOI: 10.1016/0196-9781(91)90062-T  0.042
2009 Murphy R, Doerger KM, Nathan MA, Lowe VJ. Pretreatment with diphenoxylate hydrochloride/atropine sulfate (Lomotil) does not decrease physiologic bowel FDG activity on PET/CT scans of the abdomen and pelvis Molecular Imaging and Biology. 11: 114-117. PMID 19037613 DOI: 10.1007/s11307-008-0178-8  0.042
2009 Copps J, Ahmed S, Murphy RF, Lovas S. Bioactivity of analogs of the N-terminal region of gastrin-17. Peptides. 30: 2263-7. PMID 19761808 DOI: 10.1016/j.peptides.2009.09.012  0.042
2023 Murphy R, Strube ML. RibDif2: expanding amplicon analysis to full genomes. Bioinformatics Advances. 3: vbad111. PMID 37655178 DOI: 10.1093/bioadv/vbad111  0.042
1983 Naruse S, Murphy R, Joffe S, Magee D. Cyclic changes of plasma pancreatic polypeptide and pancreatic secretion in fasting dogs Regulatory Peptides. 5: 169. DOI: 10.1016/0167-0115(83)90879-0  0.042
2021 Loving BA, Tang M, Neal MC, Gorkhali S, Murphy R, Eckel RH, Bruce KD. Lipoprotein Lipase Regulates Microglial Lipid Droplet Accumulation. Cells. 10. PMID 33498265 DOI: 10.3390/cells10020198  0.042
2011 Lin TH, Bar-Joseph Z, Murphy RF. Learning cellular sorting pathways using protein interactions and sequence motifs. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 18: 1709-22. PMID 21999284 DOI: 10.1089/Cmb.2011.0193  0.041
1995 Boman BM, Lovas S, Abraham C, Adrian TE, Murphy RF, Marbello R, Bhattacharya G. Radioimmunoassay of the APC Gene Product Using Antibodies against Its Middle and Carboxyl Regions Biochemical and Biophysical Research Communications. 206: 909-915. PMID 7832804 DOI: 10.1006/Bbrc.1995.1129  0.041
1987 NELSON J, CLARKE R, McFERRAN NV, MURPHY RF. Morpho-functional effects of Phenol Red on oestrogen-sensitive breast cancer cells Biochemical Society Transactions. 15: 244-244. DOI: 10.1042/BST0150244  0.041
2009 Copps J, Murphy RF, Lovas S. The production and role of gastrin-17 and gastrin-17-gly in gastrointestinal cancers. Protein and Peptide Letters. 16: 1504-18. PMID 20001914 DOI: 10.2174/092986609789839269  0.041
2020 Walsh DP, Raftery RM, Castaño IM, Murphy R, Cavanagh B, Heise A, O'Brien FJ, Cryan SA. Corrigendum to "Transfection of autologous host cells in vivo using gene activated collagen scaffolds incorporating star-polypeptides" [J. Control. Release 304(2019) 191-203]. Journal of Controlled Release : Official Journal of the Controlled Release Society. 320: 179. PMID 31986312 DOI: 10.1016/j.jconrel.2020.01.025  0.041
2004 Huang K, Murphy RF. Automated classification of subcellular patterns in multicell images without segmentation into single cells 2004 2nd Ieee International Symposium On Biomedical Imaging: Macro to Nano. 2: 1139-1142.  0.041
2021 McGettigan S, Farrell A, Murphy R, MacGearailt C, O'Keeffe ST, Mulkerrin EC. Improved outcomes with delayed admission to post-acute care: results of a natural experiment. European Geriatric Medicine. PMID 34313975 DOI: 10.1007/s41999-021-00545-w  0.041
2021 Levey ST, Goodloe JB, Murphy RF, Van Nortwick S. Mechanical Failure of 2 Cannulated Screw Fixation for Unstable SCFE: A Case Report. Jbjs Case Connector. 11. PMID 34910713 DOI: 10.2106/jbjs.cc.21.00501  0.04
2000 Bozsó Z, Tóth G, Murphy RF, Lovas S. Difficulties in coupling to conformationally constrained aromatic amino acids Letters in Peptide Science. 7: 157-163. DOI: 10.1023/A:1008928404072  0.04
1998 Watts CR, Lovas S, Murphy RF. Molecular dynamics simulations of epidermal growth factor and transforming growth factor-α structures in water Proteins. 33: 396-407. PMID 9829698 DOI: 10.1002/(Sici)1097-0134(19981115)33:3<396::Aid-Prot8>3.0.Co;2-I  0.04
1994 Lovas S, Murphy RF. Solvated structure analysis of a conformationally restricted analogue of phenylalanine in a dipeptide model by the AM1-SM2 method Journal of Molecular Structure. 311: 297-304. DOI: 10.1016/S0022-2860(10)80039-0  0.04
2014 Gough A, Lezon T, Faeder JR, Chennubhotla C, Murphy RF, Critchley-Thorne R, Taylor DL. High-Content Analysis with Cellular and Tissue Systems Biology: A Bridge between Cancer Cell Biology and Tissue-Based Diagnostics The Molecular Basis of Cancer: Fourth Edition. 369-392.e7. DOI: 10.1016/B978-1-4557-4066-6.00025-1  0.04
1989 Kondo T, Magee DF, Murphy RF, Naruse S, Pap A. Action of amino acids on stomach, pancreas, and gallbladder in dogs. International Journal of Pancreatology : Official Journal of the International Association of Pancreatology. 4: 41-9. PMID 2494274 DOI: 10.1007/BF02924146  0.04
2004 Huang K, Murphy RF. Boosting accuracy of automated classification of fluorescence microscope images for location proteomics. Bmc Bioinformatics. 5: 78. PMID 15207009 DOI: 10.1186/1471-2105-5-78  0.04
2008 Moore B, Murphy RF, Agrawal DK. Interaction of tgf-beta with immune cells in airway disease. Current Molecular Medicine. 8: 427-36. PMID 18691070 DOI: 10.2174/156652408785160943  0.04
1990 Douglas AJ, Walker B, Johnston CF, Murphy RF. Visualisation of the gastrin receptor within rat mucosa using a biotinylated gastrin antagonist. International Journal of Peptide and Protein Research. 35: 306-9. PMID 2345052 DOI: 10.1111/J.1399-3011.1990.TB00054.X  0.04
1978 Henry RW, Mason JC, Murphy RF, Buchanan KD. PLASMA-SECRETIN DURING FASTING The Lancet. 311: 510. PMID 76063 DOI: 10.1016/S0140-6736(78)90182-4  0.039
2020 Larrew T, Alshareef M, Murphy RF, Eskandari R, Kosnik Infinger L. Interactions between programmable shunt valves and magnetically controlled growing rods for scoliosis. Journal of Neurosurgery. Pediatrics. 1-4. PMID 33007746 DOI: 10.3171/2020.6.PEDS20299  0.039
2021 Goodloe JB, Bailey EP, Luce LT, Corrigan CS, Dow MA, Barfield WR, Murphy RF. A Standardized Order-Set Improves Variability in Opioid Discharge Prescribing Patterns After Surgical Fixation of Pediatric Supracondylar Humerus Fractures. Journal of Surgical Education. PMID 33839079 DOI: 10.1016/j.jsurg.2021.03.005  0.039
2003 Borics A, Chass GA, Csizmadia IG, Murphy RF, Lovas S. The benefits of a pre-computed amino acid structure database in quantum chemical geometry optimizations of β-turns of peptides Journal of Molecular Structure: Theochem. 666: 355-359. DOI: 10.1016/J.Theochem.2003.08.046  0.039
1984 Abram WP, Jones F, McGuigan M, Corbally N, Malone JF, Mothersill C, Seymour C, Martin WMC, Mulgrew S, Moriarty M, Bailey D, Duignan JP, Morrissey B, Crowe J, Lennon J, ... ... Murphy RF, ... ... Murphy RF, et al. Irish association for cancer research Irish Journal of Medical Science. 153: 184-193. DOI: 10.1007/BF02939824  0.039
1982 O’Hare MMT, Sloan JM, Buchanan D, Herity B, Murphy J, Moriarty M, Bourke GJ, Daly L, Atkinson RJ, Lowry WS, Dunne J, Darragh A, Brick I, McCann SR, Whelan CA, ... ... Murphy RF, et al. Irish Association for Cancer Research Irish Journal of Medical Science. 151: 128-134. DOI: 10.1007/BF02940162  0.039
1988 Kennedy DG, Nelson J, van den Berg HW, Murphy RF. A modified spectrofluorometric assay for DNA using adriamycin. Analytical Biochemistry. 167: 124-7. PMID 3434789 DOI: 10.1016/0003-2697(87)90141-2  0.039
2005 Borics A, Murphy RF, Lovas S. Molecular dynamics simulations of beta-turn forming tetra- and hexapeptides. Journal of Biomolecular Structure & Dynamics. 21: 761-70. PMID 15106998 DOI: 10.1080/07391102.2004.10506966  0.039
2005 Nair P, Schaub BE, Huang K, Chen X, Murphy RF, Griffith JM, Geuze HJ, Rohrer J. Characterization of the TGN exit signal of the human mannose 6-phosphate uncovering enzyme. Journal of Cell Science. 118: 2949-56. PMID 15976452 DOI: 10.1242/jcs.02434  0.039
1989 Haugen SE, Douglas AJ, Rønning B, Walker B, Sandvik AK, Murphy RF, Elmore DT, Waldum HL. Bioactivity studies on new gastrin analogues. Scandinavian Journal of Gastroenterology. 24: 577-80. PMID 2762757 DOI: 10.3109/00365528909093092  0.039
1979 O'Connor FA, Conlon JM, Buchanan KD, Murphy RF. The use of perfused rat intestine to characterise the glucagon-like immunoreactivity released into serosal secretions following stimulation by glucose. Hormone and Metabolic Research = Hormon- Und Stoffwechselforschung = Hormones Et Metabolisme. 11: 19-23. PMID 428905 DOI: 10.1055/S-0028-1092674  0.038
2002 Ahmed SI, Wibowo F, Gembitsky DS, Bozsó Z, Murphy RF, Lovas S. Importance of the C-terminal phenylalanine of gastrin for binding to the human CCK(2) receptor. The Journal of Peptide Research : Official Journal of the American Peptide Society. 58: 332-7. PMID 11606218 DOI: 10.1034/J.1399-3011.2001.00942.X  0.038
2011 Murphy RF. An active role for machine learning in drug development. Nature Chemical Biology. 7: 327-30. PMID 21587249 DOI: 10.1038/nchembio.576  0.038
2006 Chen SC, Zhao T, Gordon GJ, Murphy RF. A novel graphical model approach to segmenting cell images Proceedings of the 2006 Ieee Symposium On Computational Intelligence in Bioinformatics and Computational Biology, Cibcb'06. 482-489. DOI: 10.1109/CIBCB.2006.330975  0.038
2007 Agrawal A, Murphy RF, Agrawal DK. DNA methylation in breast and colorectal cancers Modern Pathology. 20: 711-721. PMID 17464311 DOI: 10.1038/modpathol.3800822  0.038
2008 Hendee WR, Cleary K, Ehman RL, Fullerton GD, Grundfest WS, Haller J, Kelley CA, Meyer AE, Murphy RF, Phillips W, Torchilin VP. Bioengineering and imaging research opportunities workshop V: summary of findings on imaging and characterizing structure and function in native and engineered tissues. Radiology. 248: 342-7. PMID 18641242 DOI: 10.1148/Radiol.2482080456  0.038
2007 Copps J, Murphy RF, Lovas S. VCD spectroscopic and molecular dynamics analysis of the Trp-cage miniprotein TC5b Biopolymers - Peptide Science Section. 88: 427-437. PMID 17326200 DOI: 10.1002/Bip.20709  0.038
2017 Murphy RF, Mooney JF. Orthobiologics in Pediatric Orthopedics. The Orthopedic Clinics of North America. 48: 323-331. PMID 28577781 DOI: 10.1016/j.ocl.2017.03.007  0.038
2015 Power BJ, O'reilly G, Murphy R, Murphy KJ, Pickering M, Jones JF. Normal nerve striations are altered in the trembler-J mouse, a model of Charcot-Marie-Tooth disease. Muscle & Nerve. 51: 246-52. PMID 24890015 DOI: 10.1002/Mus.24303  0.038
2001 Körtvélyesi T, Kiss G, Murphy RF, Penke B, Lovas S. Effect of Ala-substitution, N- and C-terminal modification and the presence of counter ions on the structure of amyloid peptide fragment 25–35 Journal of Molecular Structure: Theochem. 545: 215-223. DOI: 10.1016/S0166-1280(01)00422-5  0.038
2008 Hatfield MP, Palermo NY, Csontos J, Murphy RF, Lovas S. Evaluation of methods to cap molecular fragments in calculating energies of interaction in avian pancreatic polypeptide. International Journal of Quantum Chemistry. 108: 1017-1021. PMID 18985167 DOI: 10.1002/Qua.21553  0.038
2007 Chen X, Murphy RF. Interpretation of protein subcellular location patterns in 3D images across cell types and resolutions Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 4414: 328-342.  0.038
2004 Puri S, Telfer H, Velliste M, Murphy RF, Linstedt AD. Dispersal of Golgi matrix proteins during mitotic Golgi disassembly. Journal of Cell Science. 117: 451-6. PMID 14679306 DOI: 10.1242/Jcs.00863  0.038
1986 Balasubramaniam A, Murphy RF, Blumenthal KM. Synthesis of sequences 1-16 and 63-95 of Cerebratulus lacteus toxin AIII. Hemolytic activity in a toxin fragment. International Journal of Peptide and Protein Research. 27: 508-13. PMID 2874118 DOI: 10.1111/j.1399-3011.1986.tb01049.x  0.038
2023 Olivier SA, Bull MK, Strube ML, Murphy R, Ross T, Bowman JP, Chapman B. Long-read MinION™ sequencing of 16S and 16S-ITS-23S rRNA genes provides species-level resolution of in mixed communities. Frontiers in Microbiology. 14: 1290756. PMID 38143859 DOI: 10.3389/fmicb.2023.1290756  0.038
1985 Weesner RE, Ruffolo JJ, Murphy RF, Dincsoy HP, Mendenhall CL. Effect of chronic ethanol consumption on the pancreas of the hamster Digestive Diseases and Sciences. 30: 168-177. PMID 2578345 DOI: 10.1007/BF01308205  0.038
2015 Murphy RF, Davidson AR, Kelly DM, Warner WC, Sawyer JR. Subaxial cervical spine injuries in children and adolescents. Journal of Pediatric Orthopedics. 35: 136-9. PMID 25379826 DOI: 10.1097/BPO.0000000000000341  0.037
1994 Lovas S, Smith DD, Murnin M, Allen J, Murphy RF. Structure-activity relationships of para-substituted Phe analogues of [Nle10]NKA(4-10). Biochemical Society Transactions. 22: 5S. PMID 8206276 DOI: 10.1042/Bst022005S  0.037
2013 Talahalli R, Zarini S, Tang J, Li G, Murphy R, Kern TS, Gubitosi-Klug RA. Leukocytes regulate retinal capillary degeneration in the diabetic mouse via generation of leukotrienes. Journal of Leukocyte Biology. 93: 135-43. PMID 23108096 DOI: 10.1189/Jlb.0112025  0.037
2011 Rao A, Murphy RF. Determination of protein location diversity via analysis of immunohistochemical images from the Human Protein Atlas Proceedings - International Symposium On Biomedical Imaging. 1727-1729. DOI: 10.1109/ISBI.2011.5872738  0.037
2006 Keil C, Murphy R. An application of exposure modeling in exposure assessments for a university chemistry teaching laboratory. Journal of Occupational and Environmental Hygiene. 3: 99-106. PMID 16418083 DOI: 10.1080/15459620500498109  0.037
2013 Fraser JG, Lloyd S, Murphy R, Crowson M, Zolotor AJ, Coker-Schwimmer E, Viswanathan M. A comparative effectiveness review of parenting and trauma-focused interventions for children exposed to maltreatment. Journal of Developmental and Behavioral Pediatrics : Jdbp. 34: 353-68. PMID 23588113 DOI: 10.1097/Dbp.0B013E31828A7Dfc  0.037
1978 van den Berg HW, Murphy RF, Hunter R, Elmore DT. An improved gas--liquid chromatographic assay for 5-fluorouracil in plasma. Journal of Chromatography. 145: 311-4. PMID 649725 DOI: 10.1016/S0378-4347(00)81354-7  0.037
2014 Murphy RF, Cibulas AM, Sawyer JR, Spence DD, Kelly DM. Levels of Evidence in the Journal of Pediatric Orthopaedics: Update and Comparison to the Journal of Bone and Joint Surgery. Journal of Pediatric Orthopedics. PMID 25412071 DOI: 10.1097/BPO.0000000000000362  0.036
1997 Lovas S, Murphy RF. Molecular dynamics simulation of EGF and TGF-α: conformation and receptor binding properties☆ Journal of Molecular Structure-Theochem. 543-550. DOI: 10.1016/S0166-1280(97)00035-3  0.036
2007 Palermo NY, Csontos J, Owen MC, Murphy RF, Lovas S. Aromatic-backbone interactions in model α-helical peptides Journal of Computational Chemistry. 28: 1208-1214. PMID 17299770 DOI: 10.1002/Jcc.20578  0.036
1999 Mező I, Pató J, Kálnay A, Pályi I, Kremmer T, Tóth G, Gulyás É, Lovas S, Murphy RF, Kovács M, Horváth J, Seprődi J, Teplán I, Vincze B. Novel GnRH analogs and conjugates of high antitumor selectivity. A minireview Collection of Czechoslovak Chemical Communications. 3: 37-40. DOI: 10.1135/Css199903037  0.036
2010 Rosanbalm KD, Dodge KA, Murphy R, O'Donnell K, Christopoulos C, Gibbs SW, Appleyard K, Daro D. Evaluation of a Collaborative Community-Based Child Maltreatment Prevention Initiative. Protecting Children. 25: 8-23. PMID 25309036  0.036
2004 Chen X, Murphy RF. Location proteomics: Determining the optimal grouping of proteins according to their subcellular location patterns as determined from fluorescence microscope images Conference Record - Asilomar Conference On Signals, Systems and Computers. 1: 50-54.  0.036
2001 Vincze B, Pato J, Kremmer T, Boldizsar M, Csuka O, Gaal D, Toth G, Seprodi J, Lovas S, Murphy R. Enzyme inhibitor derivative of targeted nonbiodegradable GnRH analogue conjugate with high anticancer selectivity European Journal of Cancer. 37: S79. DOI: 10.1016/S0959-8049(01)80775-9  0.036
2006 Makinde T, Murphy RF, Agrawal DK. Immunomodulatory role of vascular endothelial growth factor and angiopoietin-1 in airway remodeling Current Molecular Medicine. 6: 831-841. PMID 17168735 DOI: 10.2174/156652406779010795  0.036
1987 Walker B, Douglas A, Debass H, Murphy R. Preparation and biological activity of two des-Phe analogues of the C-terminal region of gastrin Regulatory Peptides. 18: 368. DOI: 10.1016/0167-0115(87)90245-X  0.036
2019 Judge C, Ruttledge S, Murphy R, Loughlin E, Gorey S, Costello M, Nolan A, Ferguson J, Halloran MO, O'Canavan M, O'Donnell MJ. Aspirin for primary prevention of stroke in individuals without cardiovascular disease-A meta-analysis. International Journal of Stroke : Official Journal of the International Stroke Society. 1747493019858780. PMID 31237833 DOI: 10.1177/1747493019858780  0.035
2015 Temerinac-Ott M, Naik AW, Murphy RF. Deciding when to stop: Efficient experimentation to learn to predict drug-target interactions (Extended abstract) Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 9029: 323-325. DOI: 10.1007/978-3-319-16706-0_32  0.035
2005 Merryman TE, Kovačević J, Osuna EG, Murphy RF. Adaptive multirate data acquisition of 3D cell images Icassp, Ieee International Conference On Acoustics, Speech and Signal Processing - Proceedings. II133-II136. DOI: 10.1109/ICASSP.2005.1415359  0.035
2007 Masman MF, Lovas S, Murphy RF, Enriz RD, Rodríguez AM. Conformational preferences of N-acetyl-L-leucine-N'-methylamide. Gas-phase and solution calculations on the model dipeptide. The Journal of Physical Chemistry. A. 111: 10682-91. PMID 17887655 DOI: 10.1021/Jp0716886  0.035
1973 Murphy RF, Buchanan KD, Elmore DT. Isolation of glucagon-like immunoreactivity of gut by affinity chromatography on anti-glucagon antibodies coupled to sepharose 4 B. Biochimica Et Biophysica Acta. 303: 118-27. PMID 4701999 DOI: 10.1016/0005-2795(73)90153-0  0.035
2011 Hatfield MP, Murphy RF, Lovas S. The CLN025 decapeptide retains a β-hairpin conformation in urea and guanidinium chloride. The Journal of Physical Chemistry. B. 115: 4971-81. PMID 21480621 DOI: 10.1021/Jp111076J  0.034
1987 Magee R, Fairweather I, Johnston C, Halton D, Buchanan K, O'Neill A, Murphy R. Immunocytochemical demonstration of pancreatic polypeptide-like immunoreactivity in the liver fluke, Regulatory Peptides. 18: 371. DOI: 10.1016/0167-0115(87)90251-5  0.034
1987 Douglas A, Haugen S, Rønning B, Walker B, Sandvik A, Waldum H, Murphy R. Preparation and biological activity of a C-terminal gastrin sequence containing a ketomethylene amino bond replacement Regulatory Peptides. 18: 368. DOI: 10.1016/0167-0115(87)90244-8  0.034
2007 Glory E, Murphy RF. Automated subcellular location determination and high-throughput microscopy. Developmental Cell. 12: 7-16. PMID 17199037 DOI: 10.1016/j.devcel.2006.12.007  0.034
2007 Murphy R. Built brand tough. A strong internal rollout takes just five steps. Marketing Health Services. 27: 29-31. PMID 17619513  0.034
2022 Reddin C, Murphy R, Hankey GJ, Judge C, Xavier D, Rosengren A, Ferguson J, Alvarez-Iglesias A, Oveisgharan S, Iversen HK, Lanas F, Al-Hussein F, Czlonkowska A, Oguz A, McDermott C, et al. Association of Psychosocial Stress With Risk of Acute Stroke. Jama Network Open. 5: e2244836. PMID 36484991 DOI: 10.1001/jamanetworkopen.2022.44836  0.034
2004 Singh B, Roginsky A, Ding X, Murphy R, Talamonti M, Bell R, Adrian T. REGULATION OF P21WAF1 TURNOVER BY RETINOIC ACID IN PANCREATIC CANCER CELLS. Pancreas. 29: 334. DOI: 10.1097/00006676-200411000-00045  0.034
2008 Chen SC, Gordon GJ, Murphy RF. Graphical models for structured classification, with an application to interpreting images of protein subcellular location patterns Journal of Machine Learning Research. 9: 651-682.  0.034
2007 Borics A, Murphy RF, Lovas S. Conformational analysis of Ac-NPGQ-NH2 and Ac-VPaH-NH 2 by vibrational circular dichroism spectroscopy combined with molecular dynamics and quantum chemical calculations Protein and Peptide Letters. 14: 353-359. PMID 17504093 DOI: 10.2174/092986607780363907  0.034
2006 Owen MC, Komáromi I, Murphy RF, Lovas S. The conformational preference of Cα-centered radicals in proteins Journal of Molecular Structure: Theochem. 759: 117-124. DOI: 10.1016/J.Theochem.2005.10.047  0.034
1976 Murphy RF, Imam A, Hughes AE, McGucken MJ, Buchanan KD, Conlon JM, Elmore DT. Avoidance of strongly chaotropic eluents for immunoaffinity chromatography by chemical modification of immobilized ligand. Biochimica Et Biophysica Acta. 420: 87-96. PMID 2298 DOI: 10.1016/0005-2795(76)90347-0  0.034
1985 Tranberg KG, Tabata K, Chen MH, Murphy RF, Fischer JE, Joffe SN. Release of secretin immunoreactivity from the ileum. Annals of Surgery. 201: 300-4. PMID 3977429 DOI: 10.1097/00000658-198503000-00007  0.033
2007 Borics A, Murphy RF, Lovas S. Optical spectroscopic elucidation of β-turns in disulfide bridged cyclic tetrapeptides Biopolymers. 85: 1-11. PMID 16948119 DOI: 10.1002/bip.20593  0.033
1977 Murphy RF, Conlon JM, Imam A, Kelly GJC. Comparison of non-biospecific effects in immunoaffinity chromatography using cyanogen bromide and bifunctional oxirane as immobilising agents Journal of Chromatography A. 135: 427-433. PMID 874026 DOI: 10.1016/S0021-9673(00)88384-3  0.033
2007 Makinde T, Murphy RF, Agrawal DK. The regulatory role of TGF-β in airway remodeling in asthma Immunology and Cell Biology. 85: 348-356. PMID 17325694 DOI: 10.1038/sj.icb.7100044  0.033
2006 Hu Y, Carmona J, Murphy RF. Application of temporal texture features to automated analysis of protein subcellular locations in time series fluorescence microscope images 2006 3rd Ieee International Symposium On Biomedical Imaging: From Nano to Macro - Proceedings. 2006: 1028-1031.  0.032
2023 Miller PE, Murphy EP, Murphy R, Doran C, McKenna D, Murphy B, Doyle R, Hurson C. Does previous fragility fracture impact upon mortality in a hip fracture cohort? a retrospective study. Irish Journal of Medical Science. PMID 36715792 DOI: 10.1007/s11845-022-03267-5  0.032
2008 Palermo NY, Csontos J, Murphy RF, Lovas S. The Role of Aromatic Residues in Stabilizing the Secondary and Tertiary Structure of Avian Pancreatic Polypeptide. International Journal of Quantum Chemistry. 108: 814-819. PMID 18985166 DOI: 10.1002/Qua.21521  0.032
2002 Tóth G, Murphy RF, Lovas S. Investigation of aromatic-backbone amide interactions in the model peptide acetyl-Phe-Gly-Gly-N-methyl amide using molecular dynamics simulations and protein database search. Journal of the American Chemical Society. 123: 11782-90. PMID 11716735 DOI: 10.1021/Ja011245U  0.032
2004 Tóth G, Kövér KE, Murphy RF, Lovas S. Aromatic−Backbone Interactions in α-Helices The Journal of Physical Chemistry B. 108: 9287-9296. DOI: 10.1021/Jp037945Y  0.032
2008 Csontos J, Palermo NY, Murphy RF, Lovas S. Reply to "Comment on aromatic-backbone interactions in model α-helical peptides" Journal of Computational Chemistry. 29: 4-7. DOI: 10.1002/Jcc.20868  0.032
1993 Wang Y, Bockman CS, Lovas S, Abel PW, Murphy RF, Conlon JM. Neuropeptide gamma-(1-9)-peptide: a major product of the posttranslational processing of gamma-preprotachykinin in rat tissues. Journal of Neurochemistry. 61: 1231-5. PMID 8376981 DOI: 10.1111/J.1471-4159.1993.Tb13613.X  0.032
2021 Muldoon OT, Bradshaw D, Jay S, Kinsella EL, Maher P, Murphy R, Taaffe C, O'Donnell P. Vaccination roll-out: a time to develop and maintain trust in science and health care. The British Journal of General Practice : the Journal of the Royal College of General Practitioners. 71: 518-519. PMID 34711570 DOI: 10.3399/bjgp21X717629  0.032
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