| Year |
Citation |
Score |
| 2020 |
Haab BB, Klamer Z. Advances in Tools to Determine the Glycan-Binding Specificities of Lectins and Antibodies. Molecular & Cellular Proteomics : McP. 19: 224-232. PMID 33451384 DOI: 10.1074/mcp.R119.001836 |
0.306 |
|
| 2019 |
Haab B, Klamer Z. Advances in Tools to Determine the Glycan-Binding Specificities of Lectins and Antibodies. Molecular & Cellular Proteomics : McP. PMID 31848260 DOI: 10.1074/mcp.R119.001836 |
0.306 |
|
| 2019 |
Black A, Liang H, West CA, Wang M, Herrera H, Haab B, Angel PM, Drake RR, Mehta A. A Novel Mass Spectrometry Platform for Multiplexed N-glycoprotein Biomarker Discovery from Patient Biofluids by Antibody Panel Based N-glycan Imaging. Analytical Chemistry. PMID 31177770 DOI: 10.1021/Acs.Analchem.9B01445 |
0.325 |
|
| 2016 |
Reatini BS, Ensink E, Liau B, Sinha JY, Powers TW, Partyka K, Bern M, Brand RE, Rudd PM, Kletter D, Drake RR, Haab BB. Characterizing Protein Glycosylation through On-Chip Glycan Modification and Probing. Analytical Chemistry. PMID 27809484 DOI: 10.1021/Acs.Analchem.6B02998 |
0.331 |
|
| 2016 |
Sajda T, Hazelton J, Patel M, Seiffert-Sinha K, Steinman L, Robinson W, Haab BB, Sinha AA. Multiplexed autoantigen microarrays identify HLA as a key driver of anti-desmoglein and -non-desmoglein reactivities in pemphigus. Proceedings of the National Academy of Sciences of the United States of America. PMID 26831096 DOI: 10.1073/Pnas.1525448113 |
0.544 |
|
| 2015 |
Ensink E, Sinha J, Sinha A, Tang H, Calderone HM, Hostetter G, Winter J, Cherba D, Brand RE, Allen PJ, Sempere LF, Haab BB. Segment and Fit Thresholding: A New Method for Image Analysis Applied to Microarray and Immunofluorescence Data. Analytical Chemistry. PMID 26339978 DOI: 10.1021/Acs.Analchem.5B03159 |
0.397 |
|
| 2015 |
Singh S, Pal K, Yadav J, Tang H, Partyka K, Kletter D, Hsueh P, Ensink E, Kc B, Hostetter G, Xu HE, Bern M, Smith DF, Mehta AS, Brand R, ... ... Haab BB, et al. Upregulation of glycans containing 3' fucose in a subset of pancreatic cancers uncovered using fusion-tagged lectins. Journal of Proteome Research. 14: 2594-605. PMID 25938165 DOI: 10.1021/Acs.Jproteome.5B00142 |
0.319 |
|
| 2015 |
Tang H, Singh S, Partyka K, Kletter D, Hsueh P, Yadav J, Ensink E, Bern M, Hostetter G, Hartman D, Huang Y, Brand RE, Haab BB. Glycan motif profiling reveals plasma sialyl-lewis x elevations in pancreatic cancers that are negative for sialyl-lewis A. Molecular & Cellular Proteomics : McP. 14: 1323-33. PMID 25733690 DOI: 10.1074/Mcp.M114.047837 |
0.322 |
|
| 2015 |
Tang H, Hsueh P, Kletter D, Bern M, Haab B. The detection and discovery of glycan motifs in biological samples using lectins and antibodies: new methods and opportunities. Advances in Cancer Research. 126: 167-202. PMID 25727148 DOI: 10.1016/Bs.Acr.2014.11.003 |
0.338 |
|
| 2014 |
West MB, Partyka K, Feasley CL, Maupin KA, Goppallawa I, West CM, Haab BB, Hanigan MH. Detection of distinct glycosylation patterns on human γ-glutamyl transpeptidase 1 using antibody-lectin sandwich array (ALSA) technology. Bmc Biotechnology. 14: 101. PMID 25479762 DOI: 10.1186/S12896-014-0101-0 |
0.33 |
|
| 2014 |
Sinha A, Cherba D, Bartlam H, Lenkiewicz E, Evers L, Barrett MT, Haab BB. Mesenchymal-like pancreatic cancer cells harbor specific genomic alterations more frequently than their epithelial-like counterparts. Molecular Oncology. 8: 1253-65. PMID 24837184 DOI: 10.1016/j.molonc.2014.04.007 |
0.442 |
|
| 2014 |
Partyka K, Wang S, Zhao P, Cao B, Haab B. Array-based immunoassays with rolling-circle amplification detection. Methods in Molecular Biology (Clifton, N.J.). 1105: 3-15. PMID 24623215 DOI: 10.1007/978-1-62703-739-6_1 |
0.324 |
|
| 2014 |
Gbormittah FO, Haab BB, Partyka K, Garcia-Ott C, Hancapie M, Hancock WS. Characterization of glycoproteins in pancreatic cyst fluid using a high-performance multiple lectin affinity chromatography platform. Journal of Proteome Research. 13: 289-99. PMID 24303806 DOI: 10.1021/Pr400813U |
0.316 |
|
| 2013 |
Haab BB, Partyka K, Cao Z. Using antibody arrays to measure protein abundance and glycosylation: considerations for optimal performance. Current Protocols in Protein Science / Editorial Board, John E. Coligan ... [Et Al.]. 73: Unit 27.6. PMID 24510592 DOI: 10.1002/0471140864.ps2706s73 |
0.409 |
|
| 2013 |
Cao Z, Maupin K, Curnutte B, Fallon B, Feasley CL, Brouhard E, Kwon R, West CM, Cunningham J, Brand R, Castelli P, Crippa S, Feng Z, Allen P, Simeone DM, ... Haab BB, et al. Specific glycoforms of MUC5AC and endorepellin accurately distinguish mucinous from nonmucinous pancreatic cysts. Molecular & Cellular Proteomics : McP. 12: 2724-34. PMID 23836919 DOI: 10.1074/Mcp.M113.030700 |
0.362 |
|
| 2013 |
Cao Z, Partyka K, McDonald M, Brouhard E, Hincapie M, Brand RE, Hancock WS, Haab BB. Modulation of glycan detection on specific glycoproteins by lectin multimerization. Analytical Chemistry. 85: 1689-98. PMID 23286506 DOI: 10.1021/Ac302826A |
0.332 |
|
| 2012 |
Haab BB. Using lectins in biomarker research: addressing the limitations of sensitivity and availability. Proteomics. Clinical Applications. 6: 346-50. PMID 22927350 DOI: 10.1002/prca.201200014 |
0.314 |
|
| 2012 |
Partyka K, Maupin KA, Brand RE, Haab BB. Diverse monoclonal antibodies against the CA 19-9 antigen show variation in binding specificity with consequences for clinical interpretation. Proteomics. 12: 2212-20. PMID 22623153 DOI: 10.1002/pmic.201100676 |
0.398 |
|
| 2012 |
Lu C, Wonsidler JL, Li J, Du Y, Block T, Haab B, Chen S. Chemically-blocked antibody microarray for multiplexed high-throughput profiling of specific protein glycosylation in complex samples. Journal of Visualized Experiments : Jove. e3791. PMID 22588202 DOI: 10.3791/3791 |
0.432 |
|
| 2011 |
Yue T, Maupin KA, Fallon B, Li L, Partyka K, Anderson MA, Brenner DE, Kaul K, Zeh H, Moser AJ, Simeone DM, Feng Z, Brand RE, Haab BB. Enhanced discrimination of malignant from benign pancreatic disease by measuring the CA 19-9 antigen on specific protein carriers. Plos One. 6: e29180. PMID 22220206 DOI: 10.1371/Journal.Pone.0029180 |
0.56 |
|
| 2011 |
Haab BB, Yue T. High-throughput studies of protein glycoforms using antibody-lectin sandwich arrays. Methods in Molecular Biology (Clifton, N.J.). 785: 223-36. PMID 21901603 DOI: 10.1007/978-1-61779-286-1_15 |
0.587 |
|
| 2011 |
Yue T, Partyka K, Maupin KA, Hurley M, Andrews P, Kaul K, Moser AJ, Zeh H, Brand RE, Haab BB. Identification of blood-protein carriers of the CA 19-9 antigen and characterization of prevalence in pancreatic diseases. Proteomics. 11: 3665-74. PMID 21751362 DOI: 10.1002/Pmic.201000827 |
0.591 |
|
| 2010 |
Maupin KA, Sinha A, Eugster E, Miller J, Ross J, Paulino V, Keshamouni VG, Tran N, Berens M, Webb C, Haab BB. Glycogene expression alterations associated with pancreatic cancer epithelial-mesenchymal transition in complementary model systems. Plos One. 5: e13002. PMID 20885998 DOI: 10.1371/Journal.Pone.0013002 |
0.466 |
|
| 2010 |
Haab BB, Porter A, Yue T, Li L, Scheiman J, Anderson MA, Barnes D, Schmidt CM, Feng Z, Simeone DM. Glycosylation variants of mucins and CEACAMs as candidate biomarkers for the diagnosis of pancreatic cystic neoplasms. Annals of Surgery. 251: 937-45. PMID 20395854 DOI: 10.1097/Sla.0B013E3181D7738D |
0.543 |
|
| 2010 |
Haab BB. Antibody-lectin sandwich arrays for biomarker and glycobiology studies. Expert Review of Proteomics. 7: 9-11. PMID 20121469 DOI: 10.1586/epr.09.102 |
0.32 |
|
| 2010 |
Porter A, Yue T, Heeringa L, Day S, Suh E, Haab BB. A motif-based analysis of glycan array data to determine the specificities of glycan-binding proteins. Glycobiology. 20: 369-80. PMID 19946132 DOI: 10.1093/Glycob/Cwp187 |
0.538 |
|
| 2010 |
Zeng Z, Hincapie M, Haab BB, Hanash S, Pitteri SJ, Kluck S, Hogan JM, Kennedy J, Hancock WS. The development of an integrated platform to identify breast cancer glycoproteome changes in human serum. Journal of Chromatography. A. 1217: 3307-15. PMID 19782370 DOI: 10.1016/J.Chroma.2009.09.029 |
0.358 |
|
| 2010 |
Wu YM, Haab BB. Applications of antibody-lectin sandwich arrays (ALSA) to pancreatic cancer diagnostics and drug discovery Drug Discovery in Pancreatic Cancer: Models and Techniques. 243-269. DOI: 10.1007/978-1-4419-1160-5_13 |
0.403 |
|
| 2009 |
Wu YM, Nowack DD, Omenn GS, Haab BB. Mucin glycosylation is altered by pro-inflammatory signaling in pancreatic-cancer cells. Journal of Proteome Research. 8: 1876-86. PMID 19714813 DOI: 10.1021/pr8008379 |
0.362 |
|
| 2009 |
Yue T, Haab BB. Microarrays in glycoproteomics research. Clinics in Laboratory Medicine. 29: 15-29. PMID 19389548 DOI: 10.1016/J.Cll.2009.01.001 |
0.579 |
|
| 2009 |
Chen S, Haab BB. Analysis of glycans on serum proteins using antibody microarrays. Methods in Molecular Biology (Clifton, N.J.). 520: 39-58. PMID 19381946 DOI: 10.1007/978-1-60327-811-9_4 |
0.4 |
|
| 2009 |
Yue T, Goldstein IJ, Hollingsworth MA, Kaul K, Brand RE, Haab BB. The prevalence and nature of glycan alterations on specific proteins in pancreatic cancer patients revealed using antibody-lectin sandwich arrays. Molecular & Cellular Proteomics : McP. 8: 1697-707. PMID 19377061 DOI: 10.1074/Mcp.M900135-Mcp200 |
0.618 |
|
| 2008 |
Chen S, Haab BB. Antibody Microarrays for Protein and Glycan Detection Clinical Proteomics: From Diagnosis to Therapy. 101-111. DOI: 10.1002/9783527622153.ch8 |
0.376 |
|
| 2007 |
Forrester S, Qiu J, Mangold L, Partin A, Misek D, Phinney B, Whitten D, Andrews P, Diamandis E, Omenn GS, Hanash S, Haab BB. An experimental strategy for quantitative analysis of the humoral immune response to prostate cancer antigens using natural protein microarrays. Proteomics. Clinical Applications. 1: 494-505. PMID 21136701 DOI: 10.1002/Prca.200600802 |
0.338 |
|
| 2007 |
Chen S, LaRoche T, Hamelinck D, Bergsma D, Brenner D, Simeone D, Brand RE, Haab BB. Multiplexed analysis of glycan variation on native proteins captured by antibody microarrays. Nature Methods. 4: 437-44. PMID 17417647 DOI: 10.1038/Nmeth1035 |
0.536 |
|
| 2007 |
Yue T, Chen S, Goldstein I, Hollingsworth MA, Simeone D, Brand RE, Haab BB. PROFILING GLYCAN STRUCTURES ON MUCINS IN THE SERA OF PANCREATIC CANCER PATIENTS USING ANTIBODY ARRAYS Pancreas. 35: 437-438. DOI: 10.1097/01.Mpa.0000297820.29441.D1 |
0.605 |
|
| 2006 |
Haab BB. Applications of antibody array platforms. Current Opinion in Biotechnology. 17: 415-21. PMID 16837184 DOI: 10.1016/J.Copbio.2006.06.013 |
0.505 |
|
| 2006 |
Haab BB, Lizardi PM. RCA-enhanced protein detection arrays. Methods in Molecular Biology (Clifton, N.J.). 328: 15-29. PMID 16785639 DOI: 10.1385/1-59745-026-X:15 |
0.432 |
|
| 2006 |
Sanchez-Carbayo M, Socci ND, Lozano JJ, Haab BB, Cordon-Cardo C. Profiling bladder cancer using targeted antibody arrays. The American Journal of Pathology. 168: 93-103. PMID 16400012 DOI: 10.2353/Ajpath.2006.050601 |
0.489 |
|
| 2005 |
Orchekowski R, Hamelinck D, Li L, Gliwa E, vanBrocklin M, Marrero JA, Vande Woude GF, Feng Z, Brand R, Haab BB. Antibody microarray profiling reveals individual and combined serum proteins associated with pancreatic cancer. Cancer Research. 65: 11193-202. PMID 16322270 DOI: 10.1158/0008-5472.Can-05-1436 |
0.516 |
|
| 2005 |
Haab BB. Multiplexed protein analysis using antibody microarrays and label-based detection. Methods in Molecular Medicine. 114: 183-94. PMID 16156104 DOI: 10.1385/1-59259-923-0:183 |
0.34 |
|
| 2005 |
Gao WM, Kuick R, Orchekowski RP, Misek DE, Qiu J, Greenberg AK, Rom WN, Brenner DE, Omenn GS, Haab BB, Hanash SM. Distinctive serum protein profiles involving abundant proteins in lung cancer patients based upon antibody microarray analysis. Bmc Cancer. 5: 110. PMID 16117833 DOI: 10.1186/1471-2407-5-110 |
0.443 |
|
| 2005 |
Hamelinck D, Zhou H, Li L, Verweij C, Dillon D, Feng Z, Costa J, Haab BB. Optimized normalization for antibody microarrays and application to serum-protein profiling. Molecular & Cellular Proteomics : McP. 4: 773-84. PMID 15793073 DOI: 10.1074/Mcp.M400180-Mcp200 |
0.407 |
|
| 2005 |
Haab BB. Antibody arrays in cancer research. Molecular & Cellular Proteomics : McP. 4: 377-83. PMID 15671041 DOI: 10.1074/Mcp.M500010-Mcp200 |
0.478 |
|
| 2005 |
Orchekowski R, Hamelinck D, Li L, VanBrocklin M, Marrero J, VandeWoude G, Feng Z, Brand RE, Haab BB. SERUM-PROTEIN ALTERATIONS IN PANCREATIC CANCER PATIENTS AND THEIR USE FOR DISEASE CLASSIFICATION Pancreas. 31: 460. DOI: 10.1097/01.Mpa.0000193734.04168.Bd |
0.412 |
|
| 2005 |
Hamelinck D, Chen S, Rai A, Brand RE, Haab BB. ALTERED SERUM-PROTEIN GLYCOSYLATION IN PANCREATIC CANCER REVEALED USING ANTIBODY MICROARRAYS WITH LECTIN DETECTION Pancreas. 31: 444. DOI: 10.1097/01.Mpa.0000193678.37341.8B |
0.503 |
|
| 2004 |
Qiu J, Madoz-Gurpide J, Misek DE, Kuick R, Brenner DE, Michailidis G, Haab BB, Omenn GS, Hanash S. Development of natural protein microarrays for diagnosing cancer based on an antibody response to tumor antigens. Journal of Proteome Research. 3: 261-7. PMID 15113102 DOI: 10.1021/Pr049971U |
0.459 |
|
| 2004 |
Zhou H, Bouwman K, Schotanus M, Verweij C, Marrero JA, Dillon D, Costa J, Lizardi P, Haab BB. Two-color, rolling-circle amplification on antibody microarrays for sensitive, multiplexed serum-protein measurements. Genome Biology. 5: R28. PMID 15059261 DOI: 10.1186/Gb-2004-5-4-R28 |
0.488 |
|
| 2004 |
Haab BB, Zhou H. Multiplexed protein analysis using spotted antibody microarrays. Methods in Molecular Biology (Clifton, N.J.). 264: 33-45. PMID 15020778 DOI: 10.1385/1-59259-759-9:033 |
0.354 |
|
| 2004 |
Sanchez-Carbayo M, Socci ND, Lozano JJ, Haab B, Cordon-Cardo C. 253: Serum-Based Classification of Patients with Bladder Cancer Using Antibody Arrays Journal of Urology. 171: 66-67. DOI: 10.1016/S0022-5347(18)37515-3 |
0.437 |
|
| 2003 |
Haab BB. Methods and applications of antibody microarrays in cancer research. Proteomics. 3: 2116-22. PMID 14595810 DOI: 10.1002/Pmic.200300595 |
0.504 |
|
| 2003 |
Miller JC, Zhou H, Kwekel J, Cavallo R, Burke J, Butler EB, Teh BS, Haab BB. Antibody microarray profiling of human prostate cancer sera: antibody screening and identification of potential biomarkers. Proteomics. 3: 56-63. PMID 12548634 DOI: 10.1002/Pmic.200390009 |
0.482 |
|
| 2002 |
Robinson WH, DiGennaro C, Hueber W, Haab BB, Kamachi M, Dean EJ, Fournel S, Fong D, Genovese MC, de Vegvar HE, Skriner K, Hirschberg DL, Morris RI, Muller S, Pruijn GJ, et al. Autoantigen microarrays for multiplex characterization of autoantibody responses. Nature Medicine. 8: 295-301. PMID 11875502 DOI: 10.1038/Nm0302-295 |
0.58 |
|
| 2001 |
Haab BB. Advances in protein microarray technology for protein expression and interaction profiling Current Opinion in Drug Discovery and Development. 4: 116-123. PMID 11727317 |
0.327 |
|
| 2001 |
Haab BB, Dunham MJ, Brown PO. Protein microarrays for highly parallel detection and quantitation of specific proteins and antibodies in complex solutions. Genome Biology. 2: RESEARCH0004. PMID 11182887 DOI: 10.1186/Gb-2001-2-2-Research0004 |
0.605 |
|
| 2001 |
Robinson W, DiGennaro C, Hueber W, Fong D, Haab B, Hirshberg D, Muller S, Pruijn G, Venrooij Wv, Smolen J, Brown P, Steinman L, Utz PJ. Protein microarray characterization of the autoantibody response in systemic lupus erythematosus and related diseases Arthritis Research & Therapy. 3: 1-1. DOI: 10.1186/Ar152 |
0.575 |
|
| 1999 |
Haab BB, Mathies RA. Single-molecule detection of DNA separations in microfabricated capillary electrophoresis chips employing focused molecular streams. Analytical Chemistry. 71: 5137-45. PMID 11419480 DOI: 10.1021/Ac990644T |
0.491 |
|
| 1998 |
Haab BB, Mathies RA. Single molecule DNA detection in microfabricated capillary electrophoresis chips Proceedings of Spie - the International Society For Optical Engineering. 3259: 104-111. DOI: 10.1117/12.307316 |
0.445 |
|
| 1997 |
Haab BB, Mathies RA. Optimization of Single-Molecule Fluorescence Burst Detection of ds-DNA: Application to Capillary Electrophoresis Separations of 100–1000 Basepair Fragments Applied Spectroscopy. 51: 1579-1584. DOI: 10.1366/0003702971939136 |
0.469 |
|
| 1995 |
Haab BB, Mathies RA. Single molecule fluorescence burst detection of DNA fragments separated by capillary electrophoresis. Analytical Chemistry. 67: 3253-60. PMID 11407410 DOI: 10.1021/Ac00114A023 |
0.485 |
|
| Low-probability matches (unlikely to be authored by this person) |
| 2005 |
Rai AJ, Gelfand CA, Haywood BC, Warunek DJ, Yi J, Schuchard MD, Mehigh RJ, Cockrill SL, Scott GB, Tammen H, Schulz-Knappe P, Speicher DW, Vitzthum F, Haab BB, Siest G, et al. HUPO Plasma Proteome Project specimen collection and handling: towards the standardization of parameters for plasma proteome samples. Proteomics. 5: 3262-77. PMID 16052621 DOI: 10.1002/Pmic.200401245 |
0.298 |
|
| 2017 |
Barnett D, Liu Y, Partyka K, Huang Y, Tang H, Hostetter G, Brand RE, Singhi AD, Drake RR, Haab BB. The CA19-9 and Sialyl-TRA Antigens Define Separate Subpopulations of Pancreatic Cancer Cells. Scientific Reports. 7: 4020. PMID 28642461 DOI: 10.1038/S41598-017-04164-Z |
0.289 |
|
| 2020 |
McDowell CT, Klamer Z, Hall J, West CA, Wisniewski L, Powers TW, Angel PM, Mehta AS, Lewin DN, Haab BB, Drake RR. Imaging Mass Spectrometry and Lectin Analysis of N-Linked Glycans in Carbohydrate Antigen-Defined Pancreatic Cancer Tissues. Molecular & Cellular Proteomics : McP. 20: 100012. PMID 33581409 DOI: 10.1074/mcp.RA120.002256 |
0.288 |
|
| 2001 |
Takahashi M, Rhodes DR, Furge KA, Kanayama H, Kagawa S, Haab BB, Teh BT. Gene expression profiling of clear cell renal cell carcinoma: gene identification and prognostic classification. Proceedings of the National Academy of Sciences of the United States of America. 98: 9754-9. PMID 11493696 DOI: 10.1073/Pnas.171209998 |
0.287 |
|
| 2005 |
Haab BB, Geierstanger BH, Michailidis G, Vitzthum F, Forrester S, Okon R, Saviranta P, Brinker A, Sorette M, Perlee L, Suresh S, Drwal G, Adkins JN, Omenn GS. Immunoassay and antibody microarray analysis of the HUPO Plasma Proteome Project reference specimens: systematic variation between sample types and calibration of mass spectrometry data. Proteomics. 5: 3278-91. PMID 16038022 DOI: 10.1002/Pmic.200401276 |
0.282 |
|
| 2022 |
Klamer ZL, Harris CM, Beirne JM, Kelly JE, Zhang J, Haab BB. CarboGrove: a resource of glycan-binding specificities through analyzed glycan-array datasets from all platforms. Glycobiology. PMID 35352123 DOI: 10.1093/glycob/cwac022 |
0.277 |
|
| 2015 |
Haab BB, Huang Y, Balasenthil S, Partyka K, Tang H, Anderson M, Allen P, Sasson A, Zeh H, Kaul K, Kletter D, Ge S, Bern M, Kwon R, Blasutig I, et al. Definitive Characterization of CA 19-9 in Resectable Pancreatic Cancer Using a Reference Set of Serum and Plasma Specimens. Plos One. 10: e0139049. PMID 26431551 DOI: 10.1371/Journal.Pone.0139049 |
0.277 |
|
| 2013 |
Kletter D, Cao Z, Bern M, Haab B. Determining lectin specificity from glycan array data using motif segregation and GlycoSearch software. Current Protocols in Chemical Biology. 5: 157-69. PMID 23839995 DOI: 10.1002/9780470559277.Ch130028 |
0.271 |
|
| 2003 |
Bouwman K, Qiu J, Zhou H, Schotanus M, Mangold LA, Vogt R, Erlandson E, Trenkle J, Partin AW, Misek D, Omenn GS, Haab BB, Hanash S. Microarrays of tumor cell derived proteins uncover a distinct pattern of prostate cancer serum immunoreactivity. Proteomics. 3: 2200-7. PMID 14595819 DOI: 10.1002/Pmic.200300611 |
0.267 |
|
| 2015 |
Kletter D, Curnutte B, Maupin KA, Bern M, Haab BB. Exploring the specificities of glycan-binding proteins using glycan array data and the GlycoSearch software. Methods in Molecular Biology (Clifton, N.J.). 1273: 203-14. PMID 25753713 DOI: 10.1007/978-1-4939-2343-4_15 |
0.267 |
|
| 2012 |
Maupin KA, Liden D, Haab BB. The fine specificity of mannose-binding and galactose-binding lectins revealed using outlier motif analysis of glycan array data. Glycobiology. 22: 160-9. PMID 21875884 DOI: 10.1093/glycob/cwr128 |
0.264 |
|
| 2010 |
Bergsma D, Chen S, Buchweitz J, Gerszten R, Haab BB. Antibody-array interaction mapping, a new method to detect protein complexes applied to the discovery and study of serum amyloid P interactions with kininogen in human plasma. Molecular & Cellular Proteomics : McP. 9: 446-56. PMID 20023212 DOI: 10.1074/Mcp.M900418-Mcp200 |
0.264 |
|
| 2016 |
Tang H, Partyka K, Hsueh P, Sinha JY, Kletter D, Zeh H, Huang Y, Brand RE, Haab BB. Glycans related to the CA19-9 antigen are elevated in distinct subsets of pancreatic cancers and improve diagnostic accuracy over CA19-9. Cellular and Molecular Gastroenterology and Hepatology. 2: 201-221.e15. PMID 26998508 DOI: 10.1016/j.jcmgh.2015.12.003 |
0.26 |
|
| 2013 |
McCarter C, Kletter D, Tang H, Partyka K, Ma Y, Singh S, Yadav J, Bern M, Haab BB. Prediction of glycan motifs using quantitative analysis of multi-lectin binding: Motifs on MUC1 produced by cultured pancreatic cancer cells. Proteomics. Clinical Applications. 7: 632-41. PMID 23956151 DOI: 10.1002/Prca.201300069 |
0.259 |
|
| 2021 |
Klamer Z, Haab B. Combined Analysis of Multiple Glycan-Array Datasets: New Explorations of Protein-Glycan Interactions. Analytical Chemistry. 93: 10925-10933. PMID 34319080 DOI: 10.1021/acs.analchem.1c01739 |
0.251 |
|
| 2006 |
Haab BB, Paulovich AG, Anderson NL, Clark AM, Downing GJ, Hermjakob H, Labaer J, Uhlen M. A reagent resource to identify proteins and peptides of interest for the cancer community: a workshop report. Molecular & Cellular Proteomics : McP. 5: 1996-2007. PMID 16867976 DOI: 10.1074/Mcp.T600020-Mcp200 |
0.249 |
|
| 2005 |
Omenn GS, States DJ, Adamski M, Blackwell TW, Menon R, Hermjakob H, Apweiler R, Haab BB, Simpson RJ, Eddes JS, Kapp EA, Moritz RL, Chan DW, Rai AJ, Admon A, et al. Overview of the HUPO Plasma Proteome Project: results from the pilot phase with 35 collaborating laboratories and multiple analytical groups, generating a core dataset of 3020 proteins and a publicly-available database. Proteomics. 5: 3226-45. PMID 16104056 DOI: 10.1002/Pmic.200500358 |
0.244 |
|
| 2013 |
Kletter D, Singh S, Bern M, Haab BB. Global comparisons of lectin-glycan interactions using a database of analyzed glycan array data. Molecular & Cellular Proteomics : McP. 12: 1026-35. PMID 23399549 DOI: 10.1074/Mcp.M112.026641 |
0.244 |
|
| 2004 |
Breuhahn K, Vreden S, Haddad R, Beckebaum S, Stippel D, Flemming P, Nussbaum T, Caselmann WH, Haab BB, Schirmacher P. Molecular profiling of human hepatocellular carcinoma defines mutually exclusive interferon regulation and insulin-like growth factor II overexpression. Cancer Research. 64: 6058-64. PMID 15342387 DOI: 10.1158/0008-5472.Can-04-0292 |
0.241 |
|
| 2007 |
Forrester S, Hung KE, Kuick R, Kucherlapati R, Haab BB. Low-volume, high-throughput sandwich immunoassays for profiling plasma proteins in mice: identification of early-stage systemic inflammation in a mouse model of intestinal cancer. Molecular Oncology. 1: 216-25. PMID 19305640 DOI: 10.1016/J.Molonc.2007.06.001 |
0.241 |
|
| 2020 |
Liu Y, Kaur S, Huang Y, Fahrmann JF, Rinaudo JA, Hanash SM, Batra SK, Singhi AD, Brand RE, Maitra A, Haab BB. Biomarkers and Strategy to Detect Pre-Invasive and Early Pancreatic Cancer: State of the Field and the Impact of the EDRN. Cancer Epidemiology, Biomarkers & Prevention : a Publication of the American Association For Cancer Research, Cosponsored by the American Society of Preventive Oncology. PMID 32532830 DOI: 10.1158/1055-9965.Epi-20-0161 |
0.237 |
|
| 2005 |
Steel LF, Haab BB, Hanash SM. Methods of comparative proteomic profiling for disease diagnostics. Journal of Chromatography. B, Analytical Technologies in the Biomedical and Life Sciences. 815: 275-84. PMID 15652816 DOI: 10.1016/j.jchromb.2004.10.072 |
0.233 |
|
| 2006 |
Hung KE, Kho AT, Sarracino D, Richard LG, Krastins B, Forrester S, Haab BB, Kohane IS, Kucherlapati R. Mass spectrometry-based study of the plasma proteome in a mouse intestinal tumor model. Journal of Proteome Research. 5: 1866-78. PMID 16889408 DOI: 10.1021/Pr060120R |
0.233 |
|
| 2013 |
McWilliam HEG, Driguez P, Piedrafita D, Maupin KA, Haab BB, McManus DP, Meeusen ENT. The developing schistosome worms elicit distinct immune responses in different tissue regions Immunology and Cell Biology. 91: 477-485. PMID 23856766 DOI: 10.1038/icb.2013.33 |
0.233 |
|
| 2018 |
Klamer Z, Hsueh P, Ayala-Talavera D, Haab B. Deciphering protein glycosylation by computational integration of on-chip profiling, glycan-array data, and mass spectrometry. Molecular & Cellular Proteomics : McP. PMID 30257876 DOI: 10.1074/mcp.RA118.000906 |
0.227 |
|
| 2009 |
Hung KE, Faca V, Song K, Sarracino DA, Richard LG, Krastins B, Forrester S, Porter A, Kunin A, Mahmood U, Haab BB, Hanash SM, Kucherlapati R. Comprehensive proteome analysis of an Apc mouse model uncovers proteins associated with intestinal tumorigenesis. Cancer Prevention Research (Philadelphia, Pa.). 2: 224-33. PMID 19240248 DOI: 10.1158/1940-6207.Capr-08-0153 |
0.223 |
|
| 2013 |
Cao Z, Tang H, Partyka K, Maupin K, Brand R, Haab B. Improved prognostic accuracy in pancreatic cancer using novel glycan-based biomarkers Pancreatology. 13: e18. DOI: 10.1016/j.pan.2012.12.116 |
0.222 |
|
| 2012 |
Partyka K, McDonald M, Maupin KA, Brand R, Kwon R, Simeone DM, Allen P, Haab BB. Comparison of surgical and endoscopic sample collection for pancreatic cyst fluid biomarker identification. Journal of Proteome Research. 11: 2904-11. PMID 22439797 DOI: 10.1021/Pr2012736 |
0.221 |
|
| 2001 |
Miller JC, Butler EB, Teh BS, Haab BB. The application of protein microarrays to serum diagnostics: prostate cancer as a test case. Disease Markers. 17: 225-34. PMID 11790890 |
0.221 |
|
| 2007 |
Shafer MW, Mangold L, Partin AW, Haab BB. Antibody array profiling reveals serum TSP-1 as a marker to distinguish benign from malignant prostatic disease. The Prostate. 67: 255-67. PMID 17192876 DOI: 10.1002/pros.20514 |
0.214 |
|
| 2019 |
Barnett D, Hall J, Haab B. Automated identification and quantification of signals in multichannel immunofluorescence images: the SignalFinder platform. The American Journal of Pathology. PMID 31026417 DOI: 10.1016/j.ajpath.2019.03.011 |
0.209 |
|
| 2016 |
Tang H, Partyka K, Hsueh P, Sinha JY, Kletter D, Zeh H, Huang Y, Brand RE, Haab BB. Glycans Related to the CA19-9 Antigen Are Increased in Distinct Subsets of Pancreatic Cancers and Improve Diagnostic Accuracy Over CA19-9 Cmgh Cellular and Molecular Gastroenterology and Hepatology. 2: 210-221.e15. DOI: 10.1016/j.jcmgh.2015.12.003 |
0.203 |
|
| 2009 |
Shao C, Chen S, Chen L, Cobos E, Wang JS, Haab BB, Gao W. Antibody microarray analysis of serum glycans in esophageal squamous cell carcinoma cases and controls. Proteomics. Clinical Applications. 3: 923-31. PMID 21136996 DOI: 10.1002/prca.200800245 |
0.203 |
|
| 2019 |
Haab BB, Staal B, Barnett D, Hsueh P, He Z, Gao CF, Partyka K, Hurd MW, Singhi AD, Drake RR, Huang Y, Liu Y, Brand RE, Maitra A. The sTRA Plasma Biomarker: Blinded Validation of Improved Accuracy over CA19-9 in Pancreatic Cancer Diagnosis. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. PMID 30617132 DOI: 10.1158/1078-0432.Ccr-18-3310 |
0.2 |
|
| 2023 |
Wisniewski L, Braak S, Klamer Z, Gao C, Shi C, Allen P, Haab BB. Heterogeneity of glycan biomarker clusters as an indicator of recurrence in pancreatic cancer. Frontiers in Oncology. 13: 1135405. PMID 37124496 DOI: 10.3389/fonc.2023.1135405 |
0.195 |
|
| 2013 |
Fallon BP, Curnutte B, Maupin KA, Partyka K, Choi S, Brand RE, Langmead CJ, Tembe W, Haab BB. The Marker State Space (MSS) method for classifying clinical samples. Plos One. 8: e65905. PMID 23750276 DOI: 10.1371/Journal.Pone.0065905 |
0.193 |
|
| 1997 |
Haab BB, Mathies RA. Optimization of single-molecule fluorescence burst detection of ds-DNA: Application to capillary electrophoresis separations of 100-1000 basepair fragments Applied Spectroscopy. 51: 1579-1584. |
0.191 |
|
| 2020 |
Gao CF, Wisniewski LB, Liu Y, Staal B, Beddows I, Plenker D, Aldakkak M, Hall J, Barnett D, Kheir Gouda M, Allen PJ, Drake RR, Zureikat AH, Huang Y, Evans DB, ... ... Haab BB, et al. Detection of Chemotherapy-Resistant Pancreatic Cancer Using a Glycan Biomarker, sTRA. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. PMID 33093149 DOI: 10.1158/1078-0432.CCR-20-2475 |
0.187 |
|
| 2016 |
Sinha J, Cao Z, Dai J, Tang H, Partyka K, Hostetter G, Simeone DM, Feng Z, Allen PJ, Brand RE, Haab BB. A Gastric Glycoform of MUC5AC Is a Biomarker of Mucinous Cysts of the Pancreas. Plos One. 11: e0167070. PMID 27992432 DOI: 10.1371/Journal.Pone.0167070 |
0.185 |
|
| 2023 |
Wisniewski L, Braak S, Klamer Z, Gao C, Shi C, Allen P, Haab BB. Heterogeneity of Glycan Biomarker Clusters as an Indicator of Recurrence in Pancreatic Cancer. Biorxiv : the Preprint Server For Biology. PMID 36711795 DOI: 10.1101/2023.01.05.522607 |
0.177 |
|
| 2023 |
Lu X, McDowell CT, Blaschke CRK, Liu L, Grimsley G, Wisniewski L, Gao C, Mehta AS, Haab BB, Angel PM, Drake RR. Bioorthogonal Chemical Labeling Probes Targeting Sialic Acid Isomers for -Glycan MALDI Imaging Mass Spectrometry of Tissues, Cells, and Biofluids. Analytical Chemistry. PMID 37126482 DOI: 10.1021/acs.analchem.2c04882 |
0.17 |
|
| 2011 |
Trøstrup H, Lundquist R, Christensen LH, Jorgensen LN, Karlsmark T, Haab BB, Ågren MS. S100A8/A9 deficiency in nonhealing venous leg ulcers uncovered by multiplexed antibody microarray profiling British Journal of Dermatology. 165: 292-301. PMID 21517798 DOI: 10.1111/j.1365-2133.2011.10384.x |
0.17 |
|
| 2002 |
Guo X, Lui WO, Qian CN, Chen JD, Gray SG, Rhodes D, Haab B, Stanbridge E, Wang H, Hong MH, Min HQ, Larsson C, Teh BT. Identifying cancer-related genes in nasopharyngeal carcinoma cell lines using DNA and mRNA expression profiling analyses. International Journal of Oncology. 21: 1197-204. PMID 12429968 |
0.167 |
|
| 2017 |
Klamer Z, Staal B, Prudden A, Liu L, Smith DF, Boons GJ, Haab BB. Mining high-complexity motifs in glycans: a new language to uncover the fine-specificities of lectins and glycosidases. Analytical Chemistry. PMID 29058413 DOI: 10.1021/Acs.Analchem.7B04293 |
0.162 |
|
| 2010 |
Dupont D, Boutrou R, Menard O, Jardin J, Tanguy G, Schuck P, Haab BB, Leonil J. Heat treatment of milk during powder manufacture increases casein resistance to simulated infant digestion Food Digestion. 1: 28-39. DOI: 10.1007/s13228-010-0003-0 |
0.156 |
|
| 2014 |
Powers TW, Neely BA, Shao Y, Tang H, Troyer DA, Mehta AS, Haab BB, Drake RR. MALDI imaging mass spectrometry profiling of N-glycans in formalin-fixed paraffin embedded clinical tissue blocks and tissue microarrays. Plos One. 9: e106255. PMID 25184632 DOI: 10.1371/Journal.Pone.0106255 |
0.15 |
|
| 2008 |
Haab BB, Porter A, Schmidt M, Lee CJ, Barnes D, Simeone D. GLYCOSYLATION VARIANTS ON MUCINS AS CANDIDATE MARKERS FOR THE DIAGNOSIS OF PANCREATIC CYSTIC NEOPLASMS Pancreas. 37: 472-473. DOI: 10.1097/01.Mpa.0000335466.30936.C1 |
0.145 |
|
| 2006 |
Omenn GS, States DJ, Adamski M, Blackwell TW, Menon R, Hermjakob H, Apweiler R, Haab BB, Simpson RJ, Eddes JS, Kapp EA, Moritz RL, Chan DW, Rai AJ, Admon A, et al. Overview of the HUPO Plasma Proteome Project: Results from the pilot phase with 35 collaborating laboratories and multiple analytical groups, generating a core dataset of 3020 proteins and a publicly-available database Exploring the Human Plasma Proteome. 1-35. DOI: 10.1002/9783527609482.ch1 |
0.129 |
|
| 2007 |
Li Z, Srivastava S, Yang X, Mittal S, Norton P, Resau J, Haab B, Chan C. A hierarchical approach employing metabolic and gene expression profiles to identify the pathways that confer cytotoxicity in HepG2 cells. Bmc Systems Biology. 1: 21. PMID 17498300 DOI: 10.1186/1752-0509-1-21 |
0.118 |
|
| 2002 |
Rhodes DR, Miller JC, Haab BB, Furge KA. CIT: identification of differentially expressed clusters of genes from microarray data. Bioinformatics (Oxford, England). 18: 205-6. PMID 11836234 |
0.107 |
|
| 2004 |
Lindvall C, Furge K, Björkholm M, Guo X, Haab B, Blennow E, Nordenskjöld M, Teh BT. Combined genetic and transcriptional profiling of acute myeloid leukemia with normal and complex karyotypes. Haematologica. 89: 1072-81. PMID 15377468 |
0.106 |
|
| 2007 |
Omenn GS, Menon R, Adamski M, Blackwell T, Haab BB, Gao W, States DJ. The human plasma and serum proteome Proteomics of Human Body Fluids: Principles, Methods, and Applications. 195-224. DOI: 10.1007/978-1-59745-432-2_10 |
0.099 |
|
| 2004 |
Konwinski RR, Haddad R, Chun JA, Klenow S, Larson SC, Haab BB, Furge LL. Oltipraz, 3H-1,2-dithiole-3-thione, and sulforaphane induce overlapping and protective antioxidant responses in murine microglial cells. Toxicology Letters. 153: 343-55. PMID 15454310 DOI: 10.1016/J.Toxlet.2004.06.006 |
0.077 |
|
| 1992 |
Willa E, Osusky R, Zbinden B, Haab B. [Primary antibiotic treatment of corneal ulcers in contact lens patients]. Klinische Monatsblatter Fur Augenheilkunde. 200: 541-2. PMID 1614151 DOI: 10.1055/s-2008-1045821 |
0.023 |
|
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