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Carl L. Hansen, Ph.D. - Publications

Affiliations: 
2004 Applied Physics California Institute of Technology, Pasadena, CA 
Area:
General Biophysics
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34 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Laks E, McPherson A, Zahn H, Lai D, Steif A, Brimhall J, Biele J, Wang B, Masud T, Ting J, Grewal D, Nielsen C, Leung S, Bojilova V, Smith M, ... ... Hansen C, et al. Clonal Decomposition and DNA Replication States Defined by Scaled Single-Cell Genome Sequencing. Cell. 179: 1207-1221.e22. PMID 31730858 DOI: 10.1016/J.Cell.2019.10.026  0.321
2019 Knapp DJHF, Hammond CA, Wang F, Aghaeepour N, Miller PH, Beer PA, Pellacani D, VanInsberghe M, Hansen C, Bendall SC, Nolan GP, Eaves CJ. A topological view of human CD34+ cell state trajectories from integrated single-cell output and proteomic data. Blood. PMID 30622121 DOI: 10.1182/Blood-2018-10-878025  0.341
2018 Knapp DJHF, Hammond CA, Hui T, van Loenhout MTJ, Wang F, Aghaeepour N, Miller PH, Moksa M, Rabu GM, Beer PA, Pellacani D, Humphries RK, Hansen C, Hirst M, Eaves CJ. Single-cell analysis identifies a CD33 subset of human cord blood cells with high regenerative potential. Nature Cell Biology. 20: 710-720. PMID 29802403 DOI: 10.1038/S41556-018-0104-5  0.332
2018 VanInsberghe M, Zahn H, White AK, Petriv OI, Hansen CL. Highly multiplexed single-cell quantitative PCR. Plos One. 13: e0191601. PMID 29377915 DOI: 10.1371/Journal.Pone.0191601  0.399
2018 Wu A, Hanyang L, Rothe K, Chen M, Ruschmann J, Petriv O, O'Neill K, Maetzig T, Knapp D, Nakamichi N, Brinkman R, Birol I, Forrest DL, Hansen C, Humphries RK, et al. Global Transcriptome Profiling Identifies a Key Mir-185-PAK6 Axis That Promotes Survival of Leukemic Stem Cells and Drug-Insensitive Blasts in BCR-ABL+ Human Leukemia Blood. 132: 931-931. DOI: 10.1182/Blood-2018-99-113559  0.313
2017 Zahn H, Steif A, Laks E, Eirew P, VanInsberghe M, Shah SP, Aparicio S, Hansen CL. Scalable whole-genome single-cell library preparation without preamplification. Nature Methods. PMID 28068316 DOI: 10.1038/Nmeth.4140  0.318
2017 Eaves C, Knapp D, Hammond C, Hui A, van Loenhout M, Pellacani D, Wang F, Miller P, Lorzadeh A, Aghaeepour N, Moksa M, Vaninsberghe M, Rabu G, Beer P, Humphries R, ... ... Hansen C, et al. Molecular and biological analysis of human hematopoietic stem cells at single-cell resolution Experimental Hematology. 53: S24. DOI: 10.1016/J.Exphem.2017.06.010  0.318
2016 Leung K, Klaus A, Lin BK, Laks E, Biele J, Lai D, Bashashati A, Huang YF, Aniba R, Moksa M, Steif A, Mes-Masson AM, Hirst M, Shah SP, Aparicio S, ... Hansen CL, et al. Robust high-performance nanoliter-volume single-cell multiple displacement amplification on planar substrates. Proceedings of the National Academy of Sciences of the United States of America. PMID 27412862 DOI: 10.1073/Pnas.1520964113  0.352
2015 Sikorski DJ, Caron NJ, VanInsberghe M, Zahn H, Eaves CJ, Piret JM, Hansen CL. Clonal analysis of individual human embryonic stem cell differentiation patterns in microfluidic cultures. Biotechnology Journal. 10: 1546-54. PMID 26059045 DOI: 10.1002/Biot.201500035  0.336
2015 Lin H, Zeng J, Rothe K, Ruschmann J, Petriv O, O'Neill K, Maetzig T, Knapp D, Brinkman RR, Birol I, Forrest DL, Hansen C, Eaves CJ, Humphries RK, Jiang X. Identification and Characterization of New Microrna Biomarkers and Target Genes in Drug-Insensitive CD34+ CML Stem/Progenitor Cells Using Global Comparative RNA-Seq Analyses Blood. 126: 1567-1567. DOI: 10.1182/Blood.V126.23.1567.1567  0.305
2014 Lin H, Rothe K, Ruschmann J, Petriv O, O'Neill K, Knapp DJ, Brinkman RR, Birol I, Forrest DL, Hansen C, Eaves CJ, Humphries RK, Jiang X. Identification of New microRNA Biomarkers and Candidate Target Genes in Primitive CML Cells Using Global Comparative RNA analyses Blood. 124: 3133-3133. DOI: 10.1182/Blood.V124.21.3133.3133  0.311
2013 White AK, Heyries KA, Doolin C, Vaninsberghe M, Hansen CL. High-throughput microfluidic single-cell digital polymerase chain reaction Analytical Chemistry. 85: 7182-7190. PMID 23819473 DOI: 10.1021/Ac400896J  0.381
2013 Ricicova M, Hamidi M, Quiring A, Niemistö A, Emberly E, Hansen CL. Dissecting genealogy and cell cycle as sources of cell-to-cell variability in MAPK signaling using high-throughput lineage tracking. Proceedings of the National Academy of Sciences of the United States of America. 110: 11403-8. PMID 23803859 DOI: 10.1073/Pnas.1215850110  0.331
2013 Huft J, Haynes CA, Hansen CL. Microfluidic integration of parallel solid-phase liquid chromatography. Analytical Chemistry. 85: 2999-3005. PMID 23384109 DOI: 10.1021/Ac400163U  0.312
2013 Sloma I, Imren S, Beer PA, Zhao Y, Lecault V, Leung D, Raghuram K, Brimacombe C, Lambie K, Piret J, Hansen C, Humphries RK, Eaves CJ. Ex vivo expansion of normal and chronic myeloid leukemic stem cells without functional alteration using a NUP98HOXA10homeodomain fusion gene. Leukemia. 27: 159-69. PMID 22868969 DOI: 10.1038/Leu.2012.196  0.33
2012 Leung K, Zahn H, Leaver T, Konwar KM, Hanson NW, Pagé AP, Lo CC, Chain PS, Hallam SJ, Hansen CL. A programmable droplet-based microfluidic device applied to multiparameter analysis of single microbes and microbial communities. Proceedings of the National Academy of Sciences of the United States of America. 109: 7665-70. PMID 22547789 DOI: 10.1073/Pnas.1106752109  0.372
2012 Lecault V, White AK, Singhal A, Hansen CL. Microfluidic single cell analysis: from promise to practice. Current Opinion in Chemical Biology. 16: 381-90. PMID 22525493 DOI: 10.1016/J.Cbpa.2012.03.022  0.377
2011 Sekulovic S, Gasparetto M, Lecault V, Hoesli CA, Kent DG, Rosten P, Wan A, Brookes C, Hansen CL, Piret JM, Smith C, Eaves CJ, Humphries RK. Ontogeny stage-independent and high-level clonal expansion in vitro of mouse hematopoietic stem cells stimulated by an engineered NUP98-HOX fusion transcription factor. Blood. 118: 4366-76. PMID 21865344 DOI: 10.1182/Blood-2011-04-350066  0.325
2011 White AK, VanInsberghe M, Petriv OI, Hamidi M, Sikorski D, Marra MA, Piret J, Aparicio S, Hansen CL. High-throughput microfluidic single-cell RT-qPCR. Proceedings of the National Academy of Sciences of the United States of America. 108: 13999-4004. PMID 21808033 DOI: 10.1073/Pnas.1019446108  0.388
2011 Heyries KA, Tropini C, Vaninsberghe M, Doolin C, Petriv OI, Singhal A, Leung K, Hughesman CB, Hansen CL. Megapixel digital PCR. Nature Methods. 8: 649-51. PMID 21725299 DOI: 10.1038/Nmeth.1640  0.307
2011 Lecault V, Vaninsberghe M, Sekulovic S, Knapp DJ, Wohrer S, Bowden W, Viel F, McLaughlin T, Jarandehei A, Miller M, Falconnet D, White AK, Kent DG, Copley MR, Taghipour F, ... ... Hansen CL, et al. High-throughput analysis of single hematopoietic stem cell proliferation in microfluidic cell culture arrays. Nature Methods. 8: 581-6. PMID 21602799 DOI: 10.1038/Nmeth.1614  0.362
2011 Falconnet D, Niemistö A, Taylor RJ, Ricicova M, Galitski T, Shmulevich I, Hansen CL. High-throughput tracking of single yeast cells in a microfluidic imaging matrix Lab On a Chip - Miniaturisation For Chemistry and Biology. 11: 466-473. PMID 21088765 DOI: 10.1039/C0Lc00228C  0.349
2010 Petriv OI, Kuchenbauer F, Delaney AD, Lecault V, White A, Kent D, Marmolejo L, Heuser M, Berg T, Copley M, Ruschmann J, Sekulovic S, Benz C, Kuroda E, Ho V, ... ... Hansen CL, et al. Comprehensive microRNA expression profiling of the hematopoietic hierarchy. Proceedings of the National Academy of Sciences of the United States of America. 107: 15443-8. PMID 20702766 DOI: 10.1073/Pnas.1009320107  0.304
2009 Taylor RJ, Falconnet D, Niemistö A, Ramsey SA, Prinza S, Shmulevich I, Galitski T, Hansen CL. Dynamic analysis of MAPK signaling using a high-throughput microfluidic single-cell imaging platform Proceedings of the National Academy of Sciences of the United States of America. 106: 3758-3763. PMID 19223588 DOI: 10.1073/Pnas.0813416106  0.337
2009 Diercks AH, Ozinsky A, Hansen CL, Spotts JM, Rodriguez DJ, Aderem A. A microfluidic device for multiplexed protein detection in nano-liter volumes. Analytical Biochemistry. 386: 30-5. PMID 19133224 DOI: 10.1016/J.Ab.2008.12.012  0.331
2007 Lau BT, Baitz CA, Dong XP, Hansen CL. A complete microfluidic screening platform for rational protein crystallization. Journal of the American Chemical Society. 129: 454-5. PMID 17226984 DOI: 10.1021/Ja065855B  0.324
2006 Anderson MJ, Hansen CL, Quake SR. Phase knowledge enables rational screens for protein crystallization. Proceedings of the National Academy of Sciences of the United States of America. 103: 16746-51. PMID 17075056 DOI: 10.1073/Pnas.0605293103  0.48
2006 Hansen CL, Classen S, Berger JM, Quake SR. A microfluidic device for kinetic optimization of protein crystallization and in situ structure determination. Journal of the American Chemical Society. 128: 3142-3. PMID 16522084 DOI: 10.1021/Ja0576637  0.498
2005 Balagaddé FK, You L, Hansen CL, Arnold FH, Quake SR. Long-term monitoring of bacteria undergoing programmed population control in a microchemostat. Science (New York, N.Y.). 309: 137-40. PMID 15994559 DOI: 10.1126/Science.1109173  0.476
2004 Hansen CL, Sommer MO, Quake SR. Systematic investigation of protein phase behavior with a microfluidic formulator. Proceedings of the National Academy of Sciences of the United States of America. 101: 14431-6. PMID 15452343 DOI: 10.1073/Pnas.0405847101  0.494
2004 Liu J, Hansen C, Quake SR. Solving the "world-to-chip" interface problem with a microfluidic matrix. Analytical Chemistry. 75: 4718-23. PMID 14674446 DOI: 10.1021/ac0346407  0.41
2003 Hansen C, Quake SR. Microfluidics in structural biology: Smaller, faster... better Current Opinion in Structural Biology. 13: 538-544. PMID 14568607 DOI: 10.1016/J.Sbi.2003.09.010  0.502
2003 Liu J, Hansen C, Quake SR. Solving the "world-to-chip" interface problem with a microfluidic matrix Analytical Chemistry. 75: 4718-4723. DOI: 10.1021/Ac0346407  0.467
2002 Hansen CL, Skordalakes E, Berger JM, Quake SR. A robust and scalable microfluidic metering method that allows protein crystal growth by free interface diffusion. Proceedings of the National Academy of Sciences of the United States of America. 99: 16531-6. PMID 12486223 DOI: 10.1073/Pnas.262485199  0.515
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