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Javier Seravalli - Publications

Affiliations: 
Biochemistry The University of Nebraska - Lincoln, Lincoln, NE 
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43 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Daudu OI, Meeks KR, Zhang L, Seravalli J, Tanner JJ, Becker DF. Functional Impact of a Cancer-Related Variant in Human Δ-Pyrroline-5-Carboxylate Reductase 1. Acs Omega. 8: 3509-3519. PMID 36713721 DOI: 10.1021/acsomega.2c07788  0.58
2021 Patel SM, Seravalli J, Stiers KM, Tanner JJ, Becker DF. Kinetics of human pyrroline-5-carboxylate reductase in L-thioproline metabolism. Amino Acids. 53: 1863-1874. PMID 34792644 DOI: 10.1007/s00726-021-03095-4  0.547
2021 Mao Y, Seravalli J, Smith TG, Morton M, Tanner JJ, Becker DF. Evidence for Proline Catabolic Enzymes in the Metabolism of Thiazolidine Carboxylates. Biochemistry. 60: 3610-3620. PMID 34752700 DOI: 10.1021/acs.biochem.1c00625  0.605
2021 Patel SM, Seravalli J, Liang X, Tanner JJ, Becker DF. Disease variants of human Δ-pyrroline-5-carboxylate reductase 2 (PYCR2). Archives of Biochemistry and Biophysics. 108852. PMID 33771508 DOI: 10.1016/j.abb.2021.108852  0.584
2020 Patel S, Smith T, Morton MD, Stiers K, Seravalli J, Mayclin S, Edwards T, Tanner JJ, Becker DF. Cautionary tale of using tris(alkyl)phosphine reducing agents with NAD-dependent enzymes. Biochemistry. PMID 32841567 DOI: 10.1021/Acs.Biochem.0C00490  0.645
2020 Yadav PK, Vitvitsky V, Carballal S, Seravalli J, Banerjee R. Thioredoxin regulates human mercaptopyruvate sulfurtransferase at physiologically relevant concentrations. The Journal of Biological Chemistry. PMID 32179647 DOI: 10.1074/Jbc.Ra120.012616  0.367
2019 Dasgupta M, Budday D, de Oliveira SHP, Madzelan P, Marchany-Rivera D, Seravalli J, Hayes B, Sierra RG, Boutet S, Hunter MS, Alonso-Mori R, Batyuk A, Wierman J, Lyubimov A, Brewster AS, et al. Mix-and-inject XFEL crystallography reveals gated conformational dynamics during enzyme catalysis. Proceedings of the National Academy of Sciences of the United States of America. PMID 31801874 DOI: 10.1073/pnas.1901864116  0.377
2018 Kabil O, Motl N, Strack M, Seravalli J, Metzler-Nolte N, Banerjee R. Mechanism-based inhibition of human persulfide dioxygenase by γ-glutamyl-homocysteinyl-glycine. The Journal of Biological Chemistry. PMID 29980601 DOI: 10.1074/Jbc.Ra118.004096  0.407
2017 Scully ED, Gries T, Palmer NA, Sarath G, Funnell-Harris DL, Baird L, Twigg P, Seravalli J, Clemente TE, Sattler SE. Overexpression of SbMyb60 in Sorghum bicolor impacts both primary and secondary metabolism. The New Phytologist. PMID 28944535 DOI: 10.1111/Nph.14815  0.306
2017 Boone CH, Grove RA, Adamcova D, Seravalli J, Adamec J. Oxidative stress, metabolomics profiling, and mechanism of local anesthetic induced cell death in yeast. Redox Biology. 12: 139-149. PMID 28236766 DOI: 10.1016/J.Redox.2017.01.025  0.306
2017 Vitvitsky V, Yadav PK, An S, Seravalli J, Cho US, Banerjee R. STRUCTURAL AND MECHANISTIC INSIGHTS INTO HEMOGLOBIN-CATALYZED HYDROGEN SULFIDE OXIDATION AND THE FATE OF POLYSULFIDE PRODUCTS. The Journal of Biological Chemistry. PMID 28213526 DOI: 10.1074/Jbc.M117.774943  0.373
2015 Zhao H, Ghirlando R, Alfonso C, Arisaka F, Attali I, Bain DL, Bakhtina MM, Becker DF, Bedwell GJ, Bekdemir A, Besong TM, Birck C, Brautigam CA, Brennerman W, Byron O, ... ... Seravalli JG, et al. A multilaboratory comparison of calibration accuracy and the performance of external references in analytical ultracentrifugation. Plos One. 10: e0126420. PMID 25997164 DOI: 10.1371/Journal.Pone.0126420  0.521
2012 Kung Y, Ando N, Doukov TI, Blasiak LC, Bender G, Seravalli J, Ragsdale SW, Drennan CL. Visualizing molecular juggling within a B12-dependent methyltransferase complex. Nature. 484: 265-9. PMID 22419154 DOI: 10.1038/Nature10916  0.581
2011 Lee BC, Lobanov AV, Marino SM, Kaya A, Seravalli J, Hatfield DL, Gladyshev VN. A 4-selenocysteine, 2-selenocysteine insertion sequence (SECIS) element methionine sulfoxide reductase from Metridium senile reveals a non-catalytic function of selenocysteines. The Journal of Biological Chemistry. 286: 18747-55. PMID 21393246 DOI: 10.1074/Jbc.M111.229807  0.332
2010 Seravalli J, Ragsdale SW. Expanding the biological periodic table. Chemistry & Biology. 17: 793-4. PMID 20797607 DOI: 10.1016/J.Chembiol.2010.08.004  0.46
2009 Lazarus O, Woolerton TW, Parkin A, Lukey MJ, Reisner E, Seravalli J, Pierce E, Ragsdale SW, Sargent F, Armstrong FA. Water-gas shift reaction catalyzed by redox enzymes on conducting graphite platelets. Journal of the American Chemical Society. 131: 14154-5. PMID 19807170 DOI: 10.1021/Ja905797W  0.686
2009 Kung Y, Doukov TI, Seravalli J, Ragsdale SW, Drennan CL. Crystallographic snapshots of cyanide- and water-bound C-clusters from bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase. Biochemistry. 48: 7432-40. PMID 19583207 DOI: 10.1021/Bi900574H  0.62
2008 Seravalli J, Ragsdale SW. 13C NMR characterization of an exchange reaction between CO and CO2 catalyzed by carbon monoxide dehydrogenase. Biochemistry. 47: 6770-81. PMID 18589895 DOI: 10.1021/Bi8004522  0.535
2008 Doukov TI, Blasiak LC, Seravalli J, Ragsdale SW, Drennan CL. Xenon in and at the end of the tunnel of bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase. Biochemistry. 47: 3474-83. PMID 18293927 DOI: 10.1021/Bi702386T  0.621
2008 Seravalli J, Ragsdale SW. Pulse-chase studies of the synthesis of acetyl-CoA by carbon monoxide dehydrogenase/acetyl-CoA synthase: evidence for a random mechanism of methyl and carbonyl addition. The Journal of Biological Chemistry. 283: 8384-94. PMID 18203715 DOI: 10.1074/Jbc.M709470200  0.596
2007 Parkin A, Seravalli J, Vincent KA, Ragsdale SW, Armstrong FA. Rapid and efficient electrocatalytic CO2/CO interconversions by Carboxydothermus hydrogenoformans CO dehydrogenase I on an electrode. Journal of the American Chemical Society. 129: 10328-9. PMID 17672466 DOI: 10.1021/Ja073643O  0.528
2006 Mansoorabadi SO, Seravalli J, Furdui C, Krymov V, Gerfen GJ, Begley TP, Melnick J, Ragsdale SW, Reed GH. EPR spectroscopic and computational characterization of the hydroxyethylidene-thiamine pyrophosphate radical intermediate of pyruvate:ferredoxin oxidoreductase. Biochemistry. 45: 7122-31. PMID 16752902 DOI: 10.1021/Bi0602516  0.664
2006 Stich TA, Seravalli J, Venkateshrao S, Spiro TG, Ragsdale SW, Brunold TC. Spectroscopic studies of the corrinoid/iron-sulfur protein from Moorella thermoacetica. Journal of the American Chemical Society. 128: 5010-20. PMID 16608335 DOI: 10.1021/Ja054690O  0.602
2006 Astashkin AV, Seravalli J, Mansoorabadi SO, Reed GH, Ragsdale SW. Pulsed electron paramagnetic resonance experiments identify the paramagnetic intermediates in the pyruvate ferredoxin oxidoreductase catalytic cycle. Journal of the American Chemical Society. 128: 3888-9. PMID 16551078 DOI: 10.1021/Ja0585275  0.572
2006 Frantom PA, Seravalli J, Ragsdale SW, Fitzpatrick PF. Reduction and oxidation of the active site iron in tyrosine hydroxylase: kinetics and specificity. Biochemistry. 45: 2372-9. PMID 16475826 DOI: 10.1021/Bi052283J  0.622
2006 Frantom PA, Seravalli J, Ragsdale SW, Fitzpatrick PF. Erratum: Reduction and oxidation of the active site iron in tyrosine hydroxylase: Kinetics and specificity (Biochemistry (February 21, 2006) 45, 7 (2372-2379)) Biochemistry. 45. DOI: 10.1021/Bi0680072  0.561
2005 Tormos JR, Wiley KL, Seravalli J, Nachon F, Masson P, Nicolet Y, Quinn DM. The reactant state for substrate-activated turnover of acetylthiocholine by butyrylcholinesterase is a tetrahedral intermediate. Journal of the American Chemical Society. 127: 14538-9. PMID 16231883 DOI: 10.1021/Ja052401Q  0.368
2005 George SJ, Seravalli J, Ragsdale SW. EPR and infrared spectroscopic evidence that a kinetically competent paramagnetic intermediate is formed when acetyl-coenzyme A synthase reacts with CO. Journal of the American Chemical Society. 127: 13500-1. PMID 16190705 DOI: 10.1021/Ja0528329  0.621
2004 Gu W, Seravalli J, Ragsdale SW, Cramer SP. CO-induced structural rearrangement of the C cluster in Carboxydothermus hydrogenoformans CO dehydrogenase-evidence from Ni K-edge X-ray absorption spectroscopy. Biochemistry. 43: 9029-35. PMID 15248760 DOI: 10.1021/Bi036104E  0.568
2004 Seravalli J, Xiao Y, Gu W, Cramer SP, Antholine WE, Krymov V, Gerfen GJ, Ragsdale SW. Evidence that NiNi acetyl-CoA synthase is active and that the CuNi enzyme is not. Biochemistry. 43: 3944-55. PMID 15049702 DOI: 10.1021/Bi036194N  0.591
2003 Chen J, Huang S, Seravalli J, Gutzman H, Swartz DJ, Ragsdale SW, Bagley KA. Infrared studies of carbon monoxide binding to carbon monoxide dehydrogenase/acetyl-CoA synthase from Moorella thermoacetica. Biochemistry. 42: 14822-30. PMID 14674756 DOI: 10.1021/Bi0349470  0.587
2003 Seravalli J, Gu W, Tam A, Strauss E, Begley TP, Cramer SP, Ragsdale SW. Functional copper at the acetyl-CoA synthase active site. Proceedings of the National Academy of Sciences of the United States of America. 100: 3689-94. PMID 12589021 DOI: 10.1073/Pnas.0436720100  0.555
2003 Drennan CL, Schreiter E, Doukov TI, Chivers PT, Seravalli J, Ragsdale SW. Unique nickel sites in proteins Journal of Inorganic Biochemistry. 96: 47. DOI: 10.1016/S0162-0134(03)80485-3  0.517
2002 Doukov TI, Iverson TM, Seravalli J, Ragsdale SW, Drennan CL. A Ni-Fe-Cu center in a bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase. Science (New York, N.Y.). 298: 567-72. PMID 12386327 DOI: 10.1126/Science.1075843  0.58
2002 Seravalli J, Kumar M, Ragsdale SW. Rapid kinetic studies of acetyl-CoA synthesis: evidence supporting the catalytic intermediacy of a paramagnetic NiFeC species in the autotrophic Wood-Ljungdahl pathway. Biochemistry. 41: 1807-19. PMID 11827525 DOI: 10.1021/Bi011687I  0.65
2001 Seravalli J, Brown KL, Ragsdale SW. Acetyl coenzyme A synthesis from unnatural methylated corrinoids: requirement for "base-off" coordination at cobalt. Journal of the American Chemical Society. 123: 1786-7. PMID 11456791 DOI: 10.1021/Ja005709K  0.539
2000 Doukov T, Seravalli J, Stezowski JJ, Ragsdale SW. Crystal structure of a methyltetrahydrofolate- and corrinoid-dependent methyltransferase. Structure (London, England : 1993). 8: 817-30. PMID 10997901 DOI: 10.1016/S0969-2126(00)00172-6  0.583
2000 Seravalli J, Ragsdale SW. Channeling of carbon monoxide during anaerobic carbon dioxide fixation. Biochemistry. 39: 1274-7. PMID 10684606 DOI: 10.1021/Bi991812E  0.594
2000 Malany S, Sawai M, Sikorski RS, Seravalli J, Quinn DM, Radi? Z, Taylor P, Kronman C, Velan B, Shafferman A. Transition state structure and rate determination for the acylation stage of acetylcholinesterase catalyzed hydrolysis of (acetylthio)choline Journal of the American Chemical Society. 122: 2981-2987. DOI: 10.1021/Ja9933590  0.36
1999 Seravalli J, Shoemaker RK, Sudbeck MJ, Ragsdale SW. Binding of (6R,S)-methyltetrahydrofolate to methyltransferase from Clostridium thermoaceticum: role of protonation of methyltetrahydrofolate in the mechanism of methyl transfer. Biochemistry. 38: 5736-45. PMID 10231524 DOI: 10.1021/Bi9824745  0.543
1999 Seravalli J, Zhao S, Ragsdale SW. Mechanism of transfer of the methyl group from (6S)-methyltetrahydrofolate to the corrinoid/iron-sulfur protein catalyzed by the methyltransferase from Clostridium thermoaceticum: a key step in the Wood-Ljungdahl pathway of acetyl-CoA synthesis. Biochemistry. 38: 5728-35. PMID 10231523 DOI: 10.1021/Bi982473C  0.595
1997 Seravalli J, Kumar M, Lu WP, Ragsdale SW. Mechanism of carbon monoxide oxidation by the carbon monoxide dehydrogenase/acetyl-CoA synthase from Clostridium thermoaceticum: kinetic characterization of the intermediates. Biochemistry. 36: 11241-51. PMID 9287167 DOI: 10.1021/Bi970590M  0.71
1995 Seravalli J, Kumar M, Lu WP, Ragsdale SW. Mechanism of CO oxidation by carbon monoxide dehydrogenase from Clostridium thermoaceticum and its inhibition by anions. Biochemistry. 34: 7879-88. PMID 7794899 DOI: 10.1021/Bi00024A012  0.701
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