Yin-Long Qiu - Publications

Affiliations: 
University of Michigan, Ann Arbor, Ann Arbor, MI 
Area:
Biostatistics Biology, Statistics, Genetics

35 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2018 Mower JP, Ma PF, Grewe F, Taylor A, Michael TP, VanBuren R, Qiu YL. Lycophyte plastid genomics: extreme variation in GC, gene and intron content and multiple inversions between a direct and inverted orientation of the rRNA repeat. The New Phytologist. PMID 30556907 DOI: 10.1111/Nph.15650  0.537
2017 Taylor A, Qiu YL. Evolutionary History of Subtilases in Land Plants and Their Involvement in Symbiotic Interactions. Molecular Plant-Microbe Interactions : Mpmi. PMID 28353400 DOI: 10.1094/MPMI-10-16-0218-R  0.477
2012 Liu Y, Wang B, Cui P, Li L, Xue JY, Yu J, Qiu YL. The mitochondrial genome of the lycophyte Huperzia squarrosa: the most archaic form in vascular plants. Plos One. 7: e35168. PMID 22511984 DOI: 10.1371/Journal.Pone.0035168  0.525
2012 Nickrent DL, Blarer A, Qiu YL, Soltis DE, Soltis PS, Zanis M. Molecular data place Hydnoraceae with Aristolochiaceae. American Journal of Botany. 89: 1809-17. PMID 21665609 DOI: 10.3732/Ajb.89.11.1809  0.476
2011 Liu Y, Xue JY, Wang B, Li L, Qiu YL. The mitochondrial genomes of the early land plants Treubia lacunosa and Anomodon rugelii: dynamic and conservative evolution. Plos One. 6: e25836. PMID 21998706 DOI: 10.1371/journal.pone.0025836  0.5
2011 Soltis DE, Smith SA, Cellinese N, Wurdack KJ, Tank DC, Brockington SF, Refulio-Rodriguez NF, Walker JB, Moore MJ, Carlsward BS, Bell CD, Latvis M, Crawley S, Black C, Diouf D, ... ... Qiu YL, et al. Angiosperm phylogeny: 17 genes, 640 taxa. American Journal of Botany. 98: 704-30. PMID 21613169 DOI: 10.3732/Ajb.1000404  0.517
2010 Wang B, Yeun LH, Xue JY, Liu Y, Ané JM, Qiu YL. Presence of three mycorrhizal genes in the common ancestor of land plants suggests a key role of mycorrhizas in the colonization of land by plants. The New Phytologist. 186: 514-25. PMID 20059702 DOI: 10.1111/j.1469-8137.2009.03137.x  0.366
2010 Xue JY, Liu Y, Li L, Wang B, Qiu YL. The complete mitochondrial genome sequence of the hornwort Phaeoceros laevis: retention of many ancient pseudogenes and conservative evolution of mitochondrial genomes in hornworts. Current Genetics. 56: 53-61. PMID 19998039 DOI: 10.1007/s00294-009-0279-1  0.483
2010 Qiu YL, Li L, Wang B, Xue JY, Hendry TA, Li RQ, Brown JW, Liu Y, Hudson GT, Chen ZD. Angiosperm phylogeny inferred from sequences of four mitochondrial genes Journal of Systematics and Evolution. 48: 391-425. DOI: 10.1111/J.1759-6831.2010.00097.X  0.545
2009 Wang B, Xue J, Li L, Liu Y, Qiu YL. The complete mitochondrial genome sequence of the liverwort Pleurozia purpurea reveals extremely conservative mitochondrial genome evolution in liverworts. Current Genetics. 55: 601-9. PMID 19756627 DOI: 10.1007/s00294-009-0273-7  0.507
2009 Li L, Wang B, Liu Y, Qiu YL. The complete mitochondrial genome sequence of the hornwort Megaceros aenigmaticus shows a mixed mode of conservative yet dynamic evolution in early land plant mitochondrial genomes. Journal of Molecular Evolution. 68: 665-78. PMID 19475442 DOI: 10.1007/s00239-009-9240-7  0.513
2008 Jobson RW, Qiu YL. Did RNA editing in plant organellar genomes originate under natural selection or through genetic drift? Biology Direct. 3: 43. PMID 18939975 DOI: 10.1186/1745-6150-3-43  0.316
2008 Nie ZL, Wen J, Azuma H, Qiu YL, Sun H, Meng Y, Sun WB, Zimmer EA. Phylogenetic and biogeographic complexity of Magnoliaceae in the Northern Hemisphere inferred from three nuclear data sets. Molecular Phylogenetics and Evolution. 48: 1027-40. PMID 18619549 DOI: 10.1016/J.Ympev.2008.06.004  0.449
2008 Jian S, Soltis PS, Gitzendanner MA, Moore MJ, Li R, Hendry TA, Qiu YL, Dhingra A, Bell CD, Soltis DE. Resolving an ancient, rapid radiation in Saxifragales. Systematic Biology. 57: 38-57. PMID 18275001 DOI: 10.1080/10635150801888871  0.38
2008 McManus HA, Qiu Y. Chapter Four: Life Cycles in Major Lineages of Photosynthetic Eukaryotes, with a Special Reference to the Origin of Land Plants Fieldiana Botany. 47: 17. DOI: 10.3158/0015-0746-47.1.17  0.33
2007 Zhu XY, Chase MW, Qiu YL, Kong HZ, Dilcher DL, Li JH, Chen ZD. Mitochondrial matR sequences help to resolve deep phylogenetic relationships in rosids. Bmc Evolutionary Biology. 7: 217. PMID 17996110 DOI: 10.1186/1471-2148-7-217  0.513
2007 Liu H, Zhang X, Chen Z, Dong S, Qiu Y. Polyphyly of the fern family Tectariaceae sensu Ching: insights from cpDNA sequence data. Science in China. Series C, Life Sciences. 50: 789-98. PMID 17955187 DOI: 10.1007/s11427-007-0099-9  0.336
2007 Hendry TA, Bin W, Yang Y, Davis EC, Braggins JE, Schuster RM, Qiu YL. Evaluating phylogenetic positions of four liverworts from New Zealand, Neogrollea notabilis, Jackiella curvata, Goebelobryum unguiculatum and Herzogianthus vaginatus, using three chloroplast genes Bryologist. 110: 738-751. DOI: 10.1639/0007-2745(2007)110[738:Eppofl]2.0.Co;2  0.417
2007 Qiu YL, Li B, Wang B, Chen Z, Dombrovska O, Lee J, Kent L, Li R, Jobson RW, Hendry TA, Taylor DW, Testa CM, Ambrost M. A nonflowering land plant phylogeny inferred from nucleotide sequences of seven chloroplast, mitochondrial, and nuclear genes International Journal of Plant Sciences. 168: 691-708. DOI: 10.1086/513474  0.482
2006 Qiu YL, Li L, Wang B, Chen Z, Knoop V, Groth-Malonek M, Dombrovska O, Lee J, Kent L, Rest J, Estabrook GF, Hendry TA, Taylor DW, Testa CM, Ambros M, et al. The deepest divergences in land plants inferred from phylogenomic evidence. Proceedings of the National Academy of Sciences of the United States of America. 103: 15511-6. PMID 17030812 DOI: 10.1073/Pnas.0603335103  0.465
2006 Leebens-Mack J, Vision T, Brenner E, Bowers JE, Cannon S, Clement MJ, Cunningham CW, dePamphilis C, deSalle R, Doyle JJ, Eisen JA, Gu X, Harshman J, Jansen RK, Kellogg EA, ... ... Qiu YL, et al. Taking the first steps towards a standard for reporting on phylogenies: Minimum Information About a Phylogenetic Analysis (MIAPA). Omics : a Journal of Integrative Biology. 10: 231-7. PMID 16901231 DOI: 10.1089/Omi.2006.10.231  0.361
2005 Parkinson CL, Mower JP, Qiu YL, Shirk AJ, Song K, Young ND, DePamphilis CW, Palmer JD. Multiple major increases and decreases in mitochondrial substitution rates in the plant family Geraniaceae. Bmc Evolutionary Biology. 5: 73. PMID 16368004 DOI: 10.1186/1471-2148-5-73  0.392
2005 Dombrovska O, Qiu YL. Distribution of introns in the mitochondrial gene nad1 in land plants: phylogenetic and molecular evolutionary implications. Molecular Phylogenetics and Evolution. 32: 246-63. PMID 15186811 DOI: 10.1016/j.ympev.2003.12.013  0.441
2004 Cho Y, Mower JP, Qiu YL, Palmer JD. Mitochondrial substitution rates are extraordinarily elevated and variable in a genus of flowering plants. Proceedings of the National Academy of Sciences of the United States of America. 101: 17741-6. PMID 15598738 DOI: 10.1073/Pnas.0408302101  0.393
2004 Nickrent DL, Blarer A, Qiu YL, Vidal-Russell R, Anderson FE. Phylogenetic inference in Rafflesiales: the influence of rate heterogeneity and horizontal gene transfer. Bmc Evolutionary Biology. 4: 40. PMID 15496229 DOI: 10.1186/1471-2148-4-40  0.484
2004 Soltis DE, Albert VA, Savolainen V, Hilu K, Qiu YL, Chase MW, Farris JS, Stefanović S, Rice DW, Palmer JD, Soltis PS. Genome-scale data, angiosperm relationships, and "ending incongruence": a cautionary tale in phylogenetics. Trends in Plant Science. 9: 477-83. PMID 15465682 DOI: 10.1016/J.Tplants.2004.08.008  0.431
2004 Qiu YL, Palmer JD. Many independent origins of trans splicing of a plant mitochondrial group II intron. Journal of Molecular Evolution. 59: 80-9. PMID 15383910 DOI: 10.1007/S00239-004-2606-Y  0.401
2003 Qiu YL, Yu J. Azolla--a model organism for plant genomic studies. Genomics, Proteomics & Bioinformatics. 1: 15-25. PMID 15626330 DOI: 10.1016/S1672-0229(03)01004-0  0.373
2002 Adams KL, Qiu YL, Stoutemyer M, Palmer JD. Punctuated evolution of mitochondrial gene content: high and variable rates of mitochondrial gene loss and transfer to the nucleus during angiosperm evolution. Proceedings of the National Academy of Sciences of the United States of America. 99: 9905-12. PMID 12119382 DOI: 10.1073/Pnas.042694899  0.418
2001 Qiu Y, Lee J, Whitlock BA, Bernasconi-Quadroni F, Dombrovska O. Was the ANITA Rooting of the Angiosperm Phylogeny Affected by Long-Branch Attraction? Molecular Biology and Evolution. 18: 1745-1753. PMID 11504854 DOI: 10.1093/Oxfordjournals.Molbev.A003962  0.509
2000 Qiu YL, Lee J, Bernasconi-Quadroni F, Soltis DE, Soltis PS, Zanis M, Zimmer EA, Chen Z, Savolainen V, Chase MW. Phylogeny of basal angiosperms: Analyses of five genes from three genomes International Journal of Plant Sciences. 161: S3-S27. DOI: 10.1086/317584  0.53
2000 Balthazar Mv, Endress PK, Qiu Y. Phylogenetic Relationships in Buxaceae Based on Nuclear Internal Transcribed Spacers and Plastid ndhF Sequences International Journal of Plant Sciences. 161: 785-792. DOI: 10.1086/314302  0.451
2000 Qiu Y, Lee J. Transition To A Land Flora: A Molecular Phylogenetic Perspective Journal of Phycology. 36: 799-802. DOI: 10.1046/J.1529-8817.2000.03653.X  0.563
2000 Qiu Y, Lee J, Bernasconi-Quadroni F, Soltis DE, Soltis PS, Zanis M, Zimmer EA, Chen Z, Savolainen V, Chase MW. Erratum: The earliest angiosperms: evidence from mitochondrial, plastid and nuclear genomes Nature. 405: 101-101. DOI: 10.1038/35011110  0.411
1993 Qiu Y, Chase MW, Les DH, Parks CR. Molecular Phylogenetics of the Magnoliidae: Cladistic Analyses of Nucleotide Sequences of the Plastid Gene rbcL Annals of the Missouri Botanical Garden. 80: 587-606. DOI: 10.2307/2399848  0.519
Show low-probability matches.