☰

Chuan-Yu Hsu, Ph.D. - Publications

Affiliations: 
2003 Mississippi State University, Starkville, MS, United States 
Area:
Molecular Biology, Plant Physiology
Tree Info Grants Similar researchers PubMed Report error

17/48 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Ghosh A, Platt RN, Vandewege MW, Tabassum R, Hsu CY, Isberg SR, Peterson DG, Finger JW, Kieran TJ, Glenn TC, Gongora J, Ray DA. Identification and characterization of microRNAs (miRNAs) and their transposable element origins in the saltwater crocodile, Crocodylus porosus. Analytical Biochemistry. 113781. PMID 32485163 DOI: 10.1016/J.Ab.2020.113781  0.322
2019 Showmaker KC, Sanders WS, Eves-van den Akker S, Martin BE, Platt RN, Stokes JV, Hsu CY, Bartlett BD, Peterson DG, Wubben MJ. A genomic resource for the sedentary semi-endoparasitic reniform nematode, Linford & Oliveira. Journal of Nematology. 51: 1-2. PMID 31088025 DOI: 10.21307/Jofnem-2019-013  0.317
2018 Arick M, Hsu CY. Differential Gene Expression Analysis of Plants. Methods in Molecular Biology (Clifton, N.J.). 1783: 279-298. PMID 29767368 DOI: 10.1007/978-1-4939-7834-2_14  0.371
2018 Hsu C, Arick MA, Miao Q, Saha S, Jenkins JN, Ayubov MS, Abdurakhmonov IY, Peterson DG, Ma D. Transcriptome Analysis of Ten Days Post Anthesis Elongating Fiber in the Upland Cotton (<i>Gossypium hirsutum</i>) Chromosome Substitution Line CS-B25 American Journal of Plant Sciences. 9: 1334-1361. DOI: 10.4236/Ajps.2018.96098  0.737
2017 Grover CE, Arick MA, Conover JL, Thrash A, Hu G, Sanders WS, Hsu CY, Naqvi RZ, Farooq M, Li X, Gong L, Mudge J, Ramaraj T, Udall JA, Peterson DG, et al. Comparative Genomics of an Unusual Biogeographic Disjunction in the Cotton Tribe (Gossypieae) Yields Insights into Genome Downsizing. Genome Biology and Evolution. 9: 3328-3344. PMID 29194487 DOI: 10.1093/Gbe/Evx248  0.371
2017 Showmaker KC, Arick MA, Hsu CY, Martin BE, Wang X, Jia J, Wubben MJ, Nichols RL, Allen TW, Peterson DG, Lu SE. The genome of the cotton bacterial blight pathogen Xanthomonas citri pv. malvacearum strain MSCT1. Standards in Genomic Sciences. 12: 42. PMID 28770027 DOI: 10.1186/S40793-017-0253-3  0.324
2017 Miao Q, Deng P, Saha S, Jenkins JN, Hsu CY, Abdurakhmonov IY, Buriev ZT, Pepper A, Ma DP. Genome-wide identification and characterization of microRNAs differentially expressed in fibers in a cotton phytochrome A1 RNAi line. Plos One. 12: e0179381. PMID 28614407 DOI: 10.1371/Journal.Pone.0179381  0.676
2017 Miao Q, Deng P, Saha S, Jenkins JN, Hsu C, Abdurakhmonov IY, Buriev ZT, Pepper A, Ma D. Transcriptome Analysis of Ten-DPA Fiber in an Upland Cotton (<i>Gossypium hirsutum</i>) Line with Improved Fiber Traits from Phytochrome A1 RNAi Plants American Journal of Plant Sciences. 8: 2530-2553. DOI: 10.4236/Ajps.2017.810172  0.729
2016 Showmaker KC, Bednářová A, Gresham C, Hsu CY, Peterson DG, Krishnan N. Insight into the Salivary Gland Transcriptome of Lygus lineolaris (Palisot de Beauvois). Plos One. 11: e0147197. PMID 26789269 DOI: 10.1371/Journal.Pone.0147197  0.398
2014 Wang XQ, Showmaker KC, Yu XQ, Bi T, Hsu CY, Baird SM, Peterson DG, Li XD, Lu SE. Draft Genome Sequence of Burkholderia pyrrocinia Lyc2, a Biological Control Strain That Can Suppress Multiple Plant Microbial Pathogens. Genome Announcements. 2. PMID 25278535 DOI: 10.1128/Genomea.00991-14  0.315
2014 Soma S, Hsu C, Saha S, Jenkins JN, Ma D. Characterization of a Novel RING-Type Ubiquitin E3 Ligase GhRING2 Differentially Expressed in Cotton Fiber American Journal of Plant Sciences. 5: 3364-3379. DOI: 10.4236/Ajps.2014.521352  0.738
2011 Adams JP, Adeli A, Hsu CY, Harkess RL, Page GP, dePamphilis CW, Schultz EB, Yuceer C. Poplar maintains zinc homeostasis with heavy metal genes HMA4 and PCS1. Journal of Experimental Botany. 62: 3737-52. PMID 21504875 DOI: 10.1093/Jxb/Err025  0.402
2010 Zhang H, Harry DE, Ma C, Yuceer C, Hsu CY, Vikram V, Shevchenko O, Etherington E, Strauss SH. Precocious flowering in trees: the FLOWERING LOCUS T gene as a research and breeding tool in Populus. Journal of Experimental Botany. 61: 2549-60. PMID 20406786 DOI: 10.1093/Jxb/Erq092  0.365
2008 Hsu CY, An C, Saha S, Ma DP, Jenkins JN, Scheffler B, Stelly DM. Molecular and SNP characterization of two genome specific transcription factor genes GhMyb8 and GhMyb10 in cotton species Euphytica. 159: 259-273. DOI: 10.1007/S10681-007-9485-4  0.709
2006 Hsu CY, Liu Y, Luthe DS, Yuceer C. Poplar FT2 shortens the juvenile phase and promotes seasonal flowering. The Plant Cell. 18: 1846-61. PMID 16844908 DOI: 10.1105/Tpc.106.041038  0.323
2005 Hsu CY, Jenkins JN, Saha S, Ma DP. Transcriptional regulation of the lipid transfer protein gene LTP3 in cotton fibers by a novel MYB protein Plant Science. 168: 167-181. DOI: 10.1016/J.Plantsci.2004.07.033  0.744
1999 Hsu CY, Creech RG, Jenkins JN, Ma DP. Analysis of promoter activity of cotton lipid transfer protein gene LTP6 in transgenic tobacco plants Plant Science. 143: 63-70. DOI: 10.1016/S0168-9452(99)00026-6  0.695
Low-probability matches (unlikely to be authored by this person)
2012 Adams JP, Adeli A, Hsu CY, Harkess RL, Page GP, Depamphilis CW, Schultz EB, Yuceer C. Plant-based FRET biosensor discriminates environmental zinc levels. Plant Biotechnology Journal. 10: 207-16. PMID 21910820 DOI: 10.1111/J.1467-7652.2011.00656.X  0.299
2020 Raldúa D, Casado M, Prats E, Faria M, Puig-Castellví F, Pérez Y, Alfonso I, Hsu CY, Arick Ii MA, Garcia-Reyero N, Ziv T, Ben-Lulu S, Admon A, Piña B. Targeting redox metabolism: the perfect storm induced by acrylamide poisoning in the brain. Scientific Reports. 10: 312. PMID 31941973 DOI: 10.1038/S41598-019-57142-Y  0.293
2020 Tekedar HC, Arick MA, Hsu CY, Thrash A, Blom J, Lawrence ML, Abdelhamed H. Identification of Antimicrobial Resistance Determinants in Strain MS-17-88 Recovered From Channel Catfish (). Frontiers in Cellular and Infection Microbiology. 10: 348. PMID 32766165 DOI: 10.3389/Fcimb.2020.00348  0.28
2014 Magbanua ZV, Arick M, Buza T, Hsu CY, Showmaker KC, Chouvarine P, Deng P, Peterson DG, Lu S. Transcriptomic dissection of the rice-Burkholderia glumae interaction. Bmc Genomics. 15: 755. PMID 25183458 DOI: 10.1186/1471-2164-15-755  0.28
2022 Sheng X, Hsu CY, Ma C, Brunner AM. Functional Diversification of FLOWERING LOCUS D-LIKE3 Transcription Factor and Two Paralogs in Shoot Ontogeny, Flowering, and Vegetative Phenology. Frontiers in Plant Science. 13: 805101. PMID 35185983 DOI: 10.3389/fpls.2022.805101  0.279
2018 Abdelhamed H, Ozdemir O, Tekedar HC, Arick MA, Hsu CY, Karsi A, Lawrence ML. Complete Genome Sequence of Multidrug-Resistant Plesiomonas shigelloides Strain MS-17-188. Genome Announcements. 6. PMID 29724851 DOI: 10.1128/Genomea.00387-18  0.276
2018 Abdelhamed H, Tekedar HC, Ozdemir O, Hsu CY, Arick MA, Karsi A, Lawrence ML. Complete Genome Sequence of Multidrug-Resistant Edwardsiella ictaluri Strain MS-17-156. Genome Announcements. 6. PMID 29853512 DOI: 10.1128/Genomea.00477-18  0.274
2015 Kummari E, Alugubelly N, Hsu CY, Dong B, Nanduri B, Edelmann MJ. Activity-Based Proteomic Profiling of Deubiquitinating Enzymes in Salmonella-Infected Macrophages Leads to Identification of Putative Function of UCH-L5 in Inflammasome Regulation. Plos One. 10: e0135531. PMID 26267804 DOI: 10.1371/Journal.Pone.0135531  0.269
2010 Pechanova O, Hsu CY, Adams JP, Pechan T, Vandervelde L, Drnevich J, Jawdy S, Adeli A, Suttle JC, Lawrence AM, Tschaplinski TJ, Séguin A, Yuceer C. Apoplast proteome reveals that extracellular matrix contributes to multistress response in poplar. Bmc Genomics. 11: 674. PMID 21114852 DOI: 10.1186/1471-2164-11-674  0.266
2014 Brunner AM, Evans LM, Hsu CY, Sheng X. Vernalization and the chilling requirement to exit bud dormancy: shared or separate regulation? Frontiers in Plant Science. 5: 732. PMID 25566302 DOI: 10.3389/Fpls.2014.00732  0.262
2022 Hoffmann T, Shi X, Hsu CY, Brown A, Knight Q, Courtney LS, Mukarram RJ, Wang D. The identification of type I MADS box genes as the upstream activators of an endosperm-specific invertase inhibitor in Arabidopsis. Bmc Plant Biology. 22: 18. PMID 34991468 DOI: 10.1186/s12870-021-03399-3  0.252
2012 Hsu CY, Adams JP, No K, Liang H, Meilan R, Pechanova O, Barakat A, Carlson JE, Page GP, Yuceer C. Overexpression of CONSTANS homologs CO1 and CO2 fails to alter normal reproductive onset and fall bud set in woody perennial poplar. Plos One. 7: e45448. PMID 23029015 DOI: 10.1371/Journal.Pone.0045448  0.243
2011 Yuceer C, Hsu CY, Erbilgin N, Klepzig KD. Ultrastructure of the mycangium of the southern pine beetle, Dendroctonus frontalis (Coleoptera: Curculionidae, Scolytinae): complex morphology for complex interactions Acta Zoologica. 92: 216-224. DOI: 10.1111/J.1463-6395.2011.00500  0.243
2011 Hsu CY, Adams JP, Kim H, No K, Ma C, Strauss SH, Drnevich J, Vandervelde L, Ellis JD, Rice BM, Wickett N, Gunter LE, Tuskan GA, Brunner AM, Page GP, et al. FLOWERING LOCUS T duplication coordinates reproductive and vegetative growth in perennial poplar. Proceedings of the National Academy of Sciences of the United States of America. 108: 10756-61. PMID 21653885 DOI: 10.1073/Pnas.1104713108  0.231
2019 Faria M, Prats E, Gómez-Canela C, Hsu CY, Arick MA, Bedrossiantz J, Orozco M, Garcia-Reyero N, Ziv T, Ben-Lulu S, Admon A, Gómez-Oliván LM, Raldúa D. Therapeutic potential of N-acetylcysteine in acrylamide acute neurotoxicity in adult zebrafish. Scientific Reports. 9: 16467. PMID 31712630 DOI: 10.1038/S41598-019-53154-W  0.229
2019 Outlaw DC, Walstrom VW, Bodden HN, Hsu CY, Arick M, Peterson DG. Molecular evolution in immune genes across the avian tree of life. Parasitology Open. 5. PMID 31798943 DOI: 10.1017/pao.2019.3  0.213
2023 Arick MA, Grover CE, Hsu CY, Magbanua Z, Pechanova O, Miller ER, Thrash A, Youngblood RC, Ezzell L, Alam MS, Benzie JAH, Hamilton MG, Karsi A, Lawrence ML, Peterson DG. A high-quality chromosome-level genome assembly of rohu carp, Labeo rohita, and its utilization in SNP-based exploration of gene flow and sex determination. G3 (Bethesda, Md.). PMID 36639248 DOI: 10.1093/g3journal/jkad009  0.21
2011 Yuceer C, Hsu C, Erbilgin N, Klepzig KD. Ultrastructure of the mycangium of the southern pine beetle, Dendroctonus frontalis (Coleoptera: Curculionidae, Scolytinae): complex morphology for complex interactions: Ultrastructure of the mycangium of the southern pine beetle Acta Zoologica. 92: 216-224. DOI: 10.1111/J.1463-6395.2011.00500.X  0.203
2023 Jia L, Hsu CY, Zhang X, Li X, Schilling MW, Peebles ED, Kiess AS, Wamsley KGS, Zhang L. Changes in gene expression in the intestinal mucus of broilers with woody breast myopathy. Poultry Science. 103: 103398. PMID 38194832 DOI: 10.1016/j.psj.2023.103398  0.193
2020 Faria M, Prats E, Gómez-Canela C, Hsu CY, Arick MA, Bedrossiantz J, Orozco M, Garcia-Reyero N, Ziv T, Ben-Lulu S, Admon A, Gómez-Oliván LM, Raldúa D. Publisher Correction: Therapeutic potential of N-acetylcysteine in acrylamide acute neurotoxicity in adult zebrafish. Scientific Reports. 10: 2247. PMID 32024938 DOI: 10.1038/S41598-020-58946-Z  0.19
2023 Poudel S, Jia L, Arick MA, Hsu CY, Thrash A, Sukumaran AT, Adhikari P, Kiess AS, Zhang L. In silico prediction and expression analysis of vaccine candidate genes of Campylobacter jejuni. Poultry Science. 102: 102592. PMID 36972674 DOI: 10.1016/j.psj.2023.102592  0.183
2022 Poudel S, Li T, Arick MA, Hsu CY, Thrash A, Sukumaran AT, Adhikari P, Kiess AS, Zhang L. Complete Genome Sequences of Four Campylobacter jejuni Strains Isolated from Retail Chicken Meat and Broiler Feces. Microbiology Resource Announcements. e0089822. PMID 36106891 DOI: 10.1128/mra.00898-22  0.182
2022 Magbanua ZV, Hsu CY, Pechanova O, Arick M, Grover CE, Peterson DG. Innovations in double digest restriction-site associated DNA sequencing (ddRAD-Seq) method for more efficient SNP identification. Analytical Biochemistry. 115001. PMID 36481242 DOI: 10.1016/j.ab.2022.115001  0.17
2020 Zhao D, Kogut MH, Genovese KJ, Hsu CY, Lee JT, Farnell YZ. Altered expression of lactate dehydrogenase and monocarboxylate transporter involved in lactate metabolism in broiler wooden breast. Poultry Science. 99: 11-20. PMID 32416791 DOI: 10.3382/Ps/Pez572  0.161
2019 Zhao D, Kogut MH, Genovese KJ, Hsu CY, Lee JT, Farnell YZ. Altered expression of lactate dehydrogenase and monocarboxylate transporter involved in lactate metabolism in broiler wooden breast. Poultry Science. PMID 31573605 DOI: 10.3382/ps/pez572  0.161
2020 Li T, Castañeda CD, Arick MA, Hsu CY, Kiess AS, Zhang L. Complete Genome Sequence of Multidrug-Resistant Avian-Pathogenic Escherichia coli Strain APEC-O2-MS1170: Running Head: Complete Genome Sequence of APEC-O2-MS1170. Journal of Global Antimicrobial Resistance. PMID 33246209 DOI: 10.1016/j.jgar.2020.11.009  0.146
2019 Chen Y, Chang SKC, Zhang Y, Hsu CY, Nannapaneni R. Gut microbiota and short chain fatty acid composition as affected by legume type and processing methods as assessed by simulated in vitro digestion assays. Food Chemistry. 312: 126040. PMID 31896457 DOI: 10.1016/j.foodchem.2019.126040  0.144
2015 Kummari E, Alugubelly N, Hsu CY, Dong B, Nanduri B, Edelmann MJ. Correction: Activity-Based Proteomic Profiling of Deubiquitinating Enzymes in Salmonella-Infected Macrophages Leads to Identification of Putative Function of UCH-L5 in Inflammasome Regulation. Plos One. 10: e0138635. PMID 26372463 DOI: 10.1371/journal.pone.0138635  0.122
2020 Ranjan R, Green SJ, Mason C, Butler D, Vinas NR, Hsu CY, Wagner N, Thomas WK, Simpson S, Bivens N, Kehoe P, Tighe S. Methods to preserve individual bacteria and microbiome samples for nucleic acid analyses without altering cellular structure or integrity. Journal of Biomolecular Techniques : Jbt. 31: S16. PMID 32831709  0.118
2022 Jia L, Hsu CY, Zhang X, Li X, Schilling MW, Peebles ED, Kiess AS, Zhang L. Effects of dietary bacitracin or Bacillus subtilis on the woody breast myopathy-associated gut microbiome of Eimeria spp. challenged and unchallenged broilers. Poultry Science. 101: 101960. PMID 35690000 DOI: 10.1016/j.psj.2022.101960  0.106
2020 Tekedar HC, Arick MA, Hsu C, Thrash A, Blom J, Lawrence ML, Abdelhamed H. Identification of Antimicrobial Resistance Determinants in Aeromonas veronii Strain MS-17-88 Recovered From Channel Catfish (Ictalurus punctatus) Frontiers in Cellular and Infection Microbiology. 10. DOI: 10.3389/fcimb.2020.00348  0.043
Hide low-probability matches.