Rolf Renne - Publications

Affiliations: 
Case Western Reserve University School of Medicine, Cleveland, OH, United States 
Area:
Molecular Biology

51 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Bullard WL, Kara M, Gay LA, Sethuraman S, Wang Y, Nirmalan S, Esemenli A, Feswick A, Hoffman BA, Renne R, Tibbetts SA. Identification of murine gammaherpesvirus 68 miRNA-mRNA hybrids reveals miRNA target conservation among gammaherpesviruses including host translation and protein modification machinery. Plos Pathogens. 15: e1007843. PMID 31393953 DOI: 10.1371/journal.ppat.1007843  0.32
2018 Ungerleider N, Jain V, Wang Y, Maness NJ, Blair RV, Alvarez X, Midkiff C, Kolson D, Bai S, Roberts C, Moss WN, Wang X, Serfecz J, Seddon M, Lehman T, ... ... Renne R, et al. Comparative analysis of gammaherpesvirus circRNA repertoires: conserved and unique viral circRNAs. Journal of Virology. PMID 30567979 DOI: 10.1128/JVI.01952-18  0.36
2018 Gay LA, Turner PC, Renne R. Contemporary Ribonomics Methods for Viral microRNA Target Analysis. Non-Coding Rna. 4. PMID 30424002 DOI: 10.3390/ncrna4040031  0.36
2018 Sethuraman S, Thomas M, Gay LA, Renne R. Computational analysis of ribonomics datasets identifies long non-coding RNA targets of γ-herpesviral miRNAs. Nucleic Acids Research. PMID 29846699 DOI: 10.1093/nar/gky459  0.32
2018 Jain V, Renne R. Visualization of molecular biology: The LANA tether. Proceedings of the National Academy of Sciences of the United States of America. PMID 29691321 DOI: 10.1073/pnas.1804797115  0.36
2018 Gay LA, Sethuraman S, Thomas M, Turner PC, Renne R. Modified cross-linking, ligation, and sequencing of hybrids (qCLASH) identifies KSHV microRNA targets in endothelial cells. Journal of Virology. PMID 29386283 DOI: 10.1128/JVI.02138-17  0.36
2017 Sethuraman S, Gay LA, Jain V, Haecker I, Renne R. microRNA dependent and independent deregulation of long non-coding RNAs by an oncogenic herpesvirus. Plos Pathogens. 13: e1006508. PMID 28715488 DOI: 10.1371/journal.ppat.1006508  0.6
2016 Li W, Yan Q, Ding X, Shen C, Hu M, Zhu Y, Qin D, Lu H, Krueger BJ, Renne R, Gao SJ, Lu C. The SH3BGR/STAT3 Pathway Regulates Cell Migration and Angiogenesis Induced by a Gammaherpesvirus MicroRNA. Plos Pathogens. 12: e1005605. PMID 27128969 DOI: 10.1371/journal.ppat.1005605  0.4
2016 Feldman ER, Kara M, Oko LM, Grau KR, Krueger BJ, Zhang J, Feng P, van Dyk LF, Renne R, Tibbetts SA. A Gammaherpesvirus Noncoding RNA Is Essential for Hematogenous Dissemination and Establishment of Peripheral Latency. Msphere. 1. PMID 27110595 DOI: 10.1128/mSphere.00105-15  0.32
2016 Li W, Jia X, Shen C, Zhang M, Xu J, Shang Y, Zhu K, Hu M, Yan Q, Qin D, Lee MS, Zhu J, Lu H, Krueger BJ, Renne R, et al. A KSHV microRNA enhances viral latency and induces angiogenesis by targeting GRK2 to activate the CXCR2/AKT pathway. Oncotarget. PMID 27058419 DOI: 10.18632/oncotarget.8591  0.4
2016 Jain V, Plaisance-Bonstaff K, Sangani R, Lanier C, Dolce A, Hu J, Brulois K, Haecker I, Turner P, Renne R, Krueger B. A Toolbox for Herpesvirus miRNA Research: Construction of a Complete Set of KSHV miRNA Deletion Mutants. Viruses. 8. PMID 26907327 DOI: 10.3390/v8020054  1
2016 Dai L, Qiao J, Nguyen D, Struckhoff AP, Doyle L, Bonstaff K, Valle LD, Parsons C, Toole BP, Renne R, Qin Z. Role of heme oxygenase-1 in the pathogenesis and tumorigenicity of Kaposi's sarcoma-associated herpesvirus. Oncotarget. PMID 26859574 DOI: 10.18632/oncotarget.7227  0.4
2016 Lee MS, Yuan H, Jeon H, Zhu Y, Yoo S, Shi S, Krueger B, Renne R, Lu C, Jung JU, Gao SJ. Human Mesenchymal Stem Cells of Diverse Origins Support Persistent Infection with Kaposi's Sarcoma-Associated Herpesvirus and Manifest Distinct Angiogenic, Invasive, and Transforming Phenotypes. Mbio. 7. PMID 26814175 DOI: 10.1128/mBio.02109-15  0.4
2015 Choi HS, Jain V, Krueger B, Marshall V, Kim CH, Shisler JL, Whitby D, Renne R. Kaposi's Sarcoma-Associated Herpesvirus (KSHV) Induces the Oncogenic miR-17-92 Cluster and Down-Regulates TGF-β Signaling. Plos Pathogens. 11: e1005255. PMID 26545119 DOI: 10.1371/journal.ppat.1005255  0.36
2015 Hu M, Wang C, Li W, Lu W, Bai Z, Qin D, Yan Q, Zhu J, Krueger BJ, Renne R, Gao SJ, Lu C. A KSHV microRNA Directly Targets G Protein-Coupled Receptor Kinase 2 to Promote the Migration and Invasion of Endothelial Cells by Inducing CXCR2 and Activating AKT Signaling. Plos Pathogens. 11: e1005171. PMID 26402907 DOI: 10.1371/journal.ppat.1005171  0.4
2015 Verma D, Li DJ, Krueger B, Renne R, Swaminathan S. Identification of the physiological gene targets of the essential lytic replicative Kaposi's sarcoma-associated herpesvirus ORF57 protein. Journal of Virology. 89: 1688-702. PMID 25410858 DOI: 10.1128/JVI.02663-14  0.36
2015 Cao S, Strong MJ, Wang X, Moss WN, Concha M, Lin Z, O'Grady T, Baddoo M, Fewell C, Renne R, Flemington EK. High-throughput RNA sequencing-based virome analysis of 50 lymphoma cell lines from the Cancer Cell Line Encyclopedia project. Journal of Virology. 89: 713-29. PMID 25355872 DOI: 10.1128/JVI.02570-14  0.36
2014 Plaisance-Bonstaff K, Choi HS, Beals T, Krueger BJ, Boss IW, Gay LA, Haecker I, Hu J, Renne R. KSHV miRNAs decrease expression of lytic genes in latently infected PEL and endothelial cells by targeting host transcription factors. Viruses. 6: 4005-23. PMID 25341664 DOI: 10.3390/v6104005  0.36
2014 Yang Y, Boss IW, McIntyre LM, Renne R. A systems biology approach identified different regulatory networks targeted by KSHV miR-K12-11 in B cells and endothelial cells. Bmc Genomics. 15: 668. PMID 25106478 DOI: 10.1186/1471-2164-15-668  0.36
2014 Hu J, Yang Y, Turner PC, Jain V, McIntyre LM, Renne R. LANA binds to multiple active viral and cellular promoters and associates with the H3K4methyltransferase hSET1 complex. Plos Pathogens. 10: e1004240. PMID 25033463 DOI: 10.1371/journal.ppat.1004240  0.36
2014 Haecker I, Renne R. HITS-CLIP and PAR-CLIP advance viral miRNA targetome analysis. Critical Reviews in Eukaryotic Gene Expression. 24: 101-16. PMID 24940765  0.6
2014 Fan AX, Papadopoulos GL, Hossain MA, Lin IJ, Hu J, Tang TM, Kilberg MS, Renne R, Strouboulis J, Bungert J. Genomic and proteomic analysis of transcription factor TFII-I reveals insight into the response to cellular stress. Nucleic Acids Research. 42: 7625-41. PMID 24875474 DOI: 10.1093/nar/gku467  0.36
2014 Feldman ER, Kara M, Coleman CB, Grau KR, Oko LM, Krueger BJ, Renne R, van Dyk LF, Tibbetts SA. Virus-encoded microRNAs facilitate gammaherpesvirus latency and pathogenesis in vivo. Mbio. 5: e00981-14. PMID 24865551 DOI: 10.1128/mBio.00981-14  0.36
2014 Yang Y, Fear J, Hu J, Haecker I, Zhou L, Renne R, Bloom D, McIntyre LM. Leveraging biological replicates to improve analysis in ChIP-seq experiments. Computational and Structural Biotechnology Journal. 9: e201401002. PMID 24688750 DOI: 10.5936/csbj.201401002  0.36
2013 Han SJ, Marshall V, Barsov E, Quiñones O, Ray A, Labo N, Trivett M, Ott D, Renne R, Whitby D. Kaposi's sarcoma-associated herpesvirus microRNA single-nucleotide polymorphisms identified in clinical samples can affect microRNA processing, level of expression, and silencing activity. Journal of Virology. 87: 12237-48. PMID 24006441 DOI: 10.1128/JVI.01202-13  0.36
2013 Pantry SN, Medveczky MM, Arbuckle JH, Luka J, Montoya JG, Hu J, Renne R, Peterson D, Pritchett JC, Ablashi DV, Medveczky PG. Persistent human herpesvirus-6 infection in patients with an inherited form of the virus. Journal of Medical Virology. 85: 1940-6. PMID 23893753 DOI: 10.1002/jmv.23685  0.36
2013 Zhu Y, Haecker I, Yang Y, Gao SJ, Renne R. γ-Herpesvirus-encoded miRNAs and their roles in viral biology and pathogenesis. Current Opinion in Virology. 3: 266-75. PMID 23743127 DOI: 10.1016/j.coviro.2013.05.013  0.6
2013 Darst RP, Haecker I, Pardo CE, Renne R, Kladde MP. Epigenetic diversity of Kaposi's sarcoma-associated herpesvirus. Nucleic Acids Research. 41: 2993-3009. PMID 23361465 DOI: 10.1093/nar/gkt033  0.36
2012 Haecker I, Gay LA, Yang Y, Hu J, Morse AM, McIntyre LM, Renne R. Ago HITS-CLIP expands understanding of Kaposi's sarcoma-associated herpesvirus miRNA function in primary effusion lymphomas. Plos Pathogens. 8: e1002884. PMID 22927820 DOI: 10.1371/journal.ppat.1002884  0.36
2012 Afonso PP, Silva PM, Schnellrath LC, Jesus DM, Hu J, Yang Y, Renne R, Attias M, Condit RC, Moussatché N, Damaso CR. Biological characterization and next-generation genome sequencing of the unclassified Cotia virus SPAn232 (Poxviridae). Journal of Virology. 86: 5039-54. PMID 22345477 DOI: 10.1128/JVI.07162-11  0.36
2011 Boss IW, Nadeau PE, Abbott JR, Yang Y, Mergia A, Renne R. A Kaposi's sarcoma-associated herpesvirus-encoded ortholog of microRNA miR-155 induces human splenic B-cell expansion in NOD/LtSz-scid IL2Rγnull mice. Journal of Virology. 85: 9877-86. PMID 21813606 DOI: 10.1128/JVI.05558-11  0.36
2011 Boss IW, Renne R. Viral miRNAs and immune evasion. Biochimica Et Biophysica Acta. 1809: 708-14. PMID 21757042 DOI: 10.1016/j.bbagrm.2011.06.012  0.32
2011 Plaisance-Bonstaff K, Renne R. Viral miRNAs. Methods in Molecular Biology (Clifton, N.J.). 721: 43-66. PMID 21431678 DOI: 10.1007/978-1-61779-037-9_3  0.72
2010 Boss IW, Renne R. Viral miRNAs: tools for immune evasion. Current Opinion in Microbiology. 13: 540-5. PMID 20580307 DOI: 10.1016/j.mib.2010.05.017  0.32
2010 Han SJ, Hu J, Pierce B, Weng Z, Renne R. Mutational analysis of the latency-associated nuclear antigen DNA-binding domain of Kaposi's sarcoma-associated herpesvirus reveals structural conservation among gammaherpesvirus origin-binding proteins. The Journal of General Virology. 91: 2203-15. PMID 20484563 DOI: 10.1099/vir.0.020958-0  1
2010 Hansen A, Henderson S, Lagos D, Nikitenko L, Coulter E, Roberts S, Gratrix F, Plaisance K, Renne R, Bower M, Kellam P, Boshoff C. KSHV-encoded miRNAs target MAF to induce endothelial cell reprogramming. Genes & Development. 24: 195-205. PMID 20080955 DOI: 10.1101/gad.553410  0.36
2010 Lu F, Stedman W, Yousef M, Renne R, Lieberman PM. Epigenetic regulation of Kaposi's sarcoma-associated herpesvirus latency by virus-encoded microRNAs that target Rta and the cellular Rbl2-DNMT pathway. Journal of Virology. 84: 2697-706. PMID 20071580 DOI: 10.1128/JVI.01997-09  0.36
2009 Boss IW, Plaisance KB, Renne R. Role of virus-encoded microRNAs in herpesvirus biology. Trends in Microbiology. 17: 544-53. PMID 19828316 DOI: 10.1016/j.tim.2009.09.002  0.32
2009 Hu J, Liu E, Renne R. Involvement of SSRP1 in latent replication of Kaposi's sarcoma-associated herpesvirus. Journal of Virology. 83: 11051-63. PMID 19710137 DOI: 10.1128/JVI.00907-09  1
2009 Verrier JD, Lau P, Hudson L, Murashov AK, Renne R, Notterpek L. Peripheral myelin protein 22 is regulated post-transcriptionally by miRNA-29a. Glia. 57: 1265-79. PMID 19170179 DOI: 10.1002/glia.20846  0.36
2007 Skalsky RL, Samols MA, Plaisance KB, Boss IW, Riva A, Lopez MC, Baker HV, Renne R. Kaposi's sarcoma-associated herpesvirus encodes an ortholog of miR-155. Journal of Virology. 81: 12836-45. PMID 17881434 DOI: 10.1128/JVI.01804-07  0.6
2007 Skalsky RL, Hu J, Renne R. Analysis of viral cis elements conferring Kaposi's sarcoma-associated herpesvirus episome partitioning and maintenance. Journal of Virology. 81: 9825-37. PMID 17626102 DOI: 10.1128/JVI.00842-07  1
2007 Samols MA, Skalsky RL, Maldonado AM, Riva A, Lopez MC, Baker HV, Renne R. Identification of cellular genes targeted by KSHV-encoded microRNAs. Plos Pathogens. 3: e65. PMID 17500590 DOI: 10.1371/journal.ppat.0030065  0.6
2007 Marshall V, Parks T, Bagni R, Wang CD, Samols MA, Hu J, Wyvil KM, Aleman K, Little RF, Yarchoan R, Renne R, Whitby D. Conservation of virally encoded microRNAs in Kaposi sarcoma--associated herpesvirus in primary effusion lymphoma cell lines and in patients with Kaposi sarcoma or multicentric Castleman disease. The Journal of Infectious Diseases. 195: 645-59. PMID 17262705 DOI: 10.1086/511434  0.36
2006 An FQ, Folarin HM, Compitello N, Roth J, Gerson SL, McCrae KR, Fakhari FD, Dittmer DP, Renne R. Long-term-infected telomerase-immortalized endothelial cells: a model for Kaposi's sarcoma-associated herpesvirus latency in vitro and in vivo. Journal of Virology. 80: 4833-46. PMID 16641275 DOI: 10.1128/JVI.80.10.4833-4846.2006  0.36
2005 Samols MA, Hu J, Skalsky RL, Renne R. Cloning and identification of a microRNA cluster within the latency-associated region of Kaposi's sarcoma-associated herpesvirus. Journal of Virology. 79: 9301-5. PMID 15994824 DOI: 10.1128/JVI.79.14.9301-9305.2005  1
2005 Hu J, Renne R. Characterization of the minimal replicator of Kaposi's sarcoma-associated herpesvirus latent origin. Journal of Virology. 79: 2637-42. PMID 15681465 DOI: 10.1128/JVI.79.4.2637-2642.2005  1
2004 Jeong JH, Orvis J, Kim JW, McMurtrey CP, Renne R, Dittmer DP. Regulation and autoregulation of the promoter for the latency-associated nuclear antigen of Kaposi's sarcoma-associated herpesvirus. The Journal of Biological Chemistry. 279: 16822-31. PMID 14742422 DOI: 10.1074/jbc.M312801200  0.36
2002 Hu J, Garber AC, Renne R. The latency-associated nuclear antigen of Kaposi's sarcoma-associated herpesvirus supports latent DNA replication in dividing cells. Journal of Virology. 76: 11677-87. PMID 12388727  1
2002 Garber AC, Hu J, Renne R. Latency-associated nuclear antigen (LANA) cooperatively binds to two sites within the terminal repeat, and both sites contribute to the ability of LANA to suppress transcription and to facilitate DNA replication. The Journal of Biological Chemistry. 277: 27401-11. PMID 12015325 DOI: 10.1074/jbc.M203489200  1
2001 Garber AC, Shu MA, Hu J, Renne R. DNA binding and modulation of gene expression by the latency-associated nuclear antigen of Kaposi's sarcoma-associated herpesvirus. Journal of Virology. 75: 7882-92. PMID 11483733  1
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