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Minh Doan, Ph.D., M.D. - Publications

Affiliations: 
2016- Imaging Platform Broad Institute of MIT and Harvard, USA 
Area:
Leukemia, Imaging Flow Cytometry, Assay Development
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14/35 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Barnes CM, Power AL, Barber DG, Tennant RK, Jones RT, Lee GR, Hatton J, Elliott A, Zaragoza-Castells J, Haley SM, Summers HD, Doan M, Carpenter AE, Rees P, Love J. Deductive automated pollen classification in environmental samples via exploratory deep learning and imaging flow cytometry. The New Phytologist. PMID 37678361 DOI: 10.1111/nph.19186  0.588
2022 Rees P, Summers HD, Filby A, Carpenter AE, Doan M. Imaging flow cytometry: a primer. Nature Reviews. Methods Primers. 2. PMID 37655209 DOI: 10.1038/s43586-022-00167-x  0.693
2022 Rohban MH, Fuller AM, Tan C, Goldstein JT, Syangtan D, Gutnick A, DeVine A, Nijsure MP, Rigby M, Sacher JR, Corsello SM, Peppler GB, Bogaczynska M, Boghossian A, Ciotti GE, ... ... Doan M, et al. Virtual screening for small-molecule pathway regulators by image-profile matching. Cell Systems. PMID 36057257 DOI: 10.1016/j.cels.2022.08.003  0.675
2021 Wills JW, Verma JR, Rees BJ, Harte DSG, Haxhiraj Q, Barnes CM, Barnes R, Rodrigues MA, Doan M, Filby A, Hewitt RE, Thornton CA, Cronin JG, Kenny JD, Buckley R, et al. Inter-laboratory automation of the in vitro micronucleus assay using imaging flow cytometry and deep learning. Archives of Toxicology. PMID 34245348 DOI: 10.1007/s00204-021-03113-0  0.69
2021 Doan M, Barnes C, McQuin C, Caicedo JC, Goodman A, Carpenter AE, Rees P. Deepometry, a framework for applying supervised and weakly supervised deep learning to imaging cytometry. Nature Protocols. PMID 34145434 DOI: 10.1038/s41596-021-00549-7  0.641
2020 Doan M, Sebastian JA, Caicedo JC, Siegert S, Roch A, Turner TR, Mykhailova O, Pinto RN, McQuin C, Goodman A, Parsons MJ, Wolkenhauer O, Hennig H, Singh S, Wilson A, et al. Objective assessment of stored blood quality by deep learning. Proceedings of the National Academy of Sciences of the United States of America. PMID 32839303 DOI: 10.1073/Pnas.2001227117  0.743
2020 Doan M, Case M, Masic D, Hennig H, McQuin C, Caicedo J, Singh S, Goodman A, Wolkenhauer O, Summers HD, Jamieson D, Delft FV, Filby A, Carpenter AE, Rees P, et al. Label-Free Leukemia Monitoring by Computer Vision. Cytometry. Part a : the Journal of the International Society For Analytical Cytology. PMID 32091180 DOI: 10.1002/Cyto.A.23987  0.754
2020 Caicedo JC, Goodman A, Karhohs KW, Cimini BA, Ackerman J, Haghighi M, Heng C, Becker T, Doan M, McQuin C, Rohban M, Singh S, Carpenter AE. Publisher Correction: Nucleus segmentation across imaging experiments: the 2018 Data Science Bowl. Nature Methods. PMID 31969730 DOI: 10.1038/S41592-020-0733-Z  0.684
2019 Caicedo JC, Goodman A, Karhohs KW, Cimini BA, Ackerman J, Haghighi M, Heng C, Becker T, Doan M, McQuin C, Rohban M, Singh S, Carpenter AE. Nucleus segmentation across imaging experiments: the 2018 Data Science Bowl. Nature Methods. PMID 31636459 DOI: 10.1038/S41592-019-0612-7  0.713
2019 Nassar M, Doan M, Filby A, Wolkenhauer O, Fogg DK, Piasecka J, Thornton CA, Carpenter AE, Summers HD, Rees P, Hennig H. Label-Free Identification of White Blood Cells Using Machine Learning. Cytometry. Part a : the Journal of the International Society For Analytical Cytology. PMID 31081599 DOI: 10.1002/Cyto.A.23794  0.701
2019 Doan M, Carpenter AE. Leveraging machine vision in cell-based diagnostics to do more with less. Nature Materials. 18: 414-418. PMID 31000804 DOI: 10.1038/S41563-019-0339-Y  0.567
2018 McQuin C, Goodman A, Chernyshev V, Kamentsky L, Cimini BA, Karhohs KW, Doan M, Ding L, Rafelski SM, Thirstrup D, Wiegraebe W, Singh S, Becker T, Caicedo JC, Carpenter AE. CellProfiler 3.0: Next-generation image processing for biology. Plos Biology. 16: e2005970. PMID 29969450 DOI: 10.1371/Journal.Pbio.2005970  0.699
2018 Doan M, Vorobjev I, Rees P, Filby A, Wolkenhauer O, Goldfeld AE, Lieberman J, Barteneva N, Carpenter AE, Hennig H. Diagnostic Potential of Imaging Flow Cytometry. Trends in Biotechnology. PMID 29395345 DOI: 10.1016/J.Tibtech.2017.12.008  0.753
2017 Doan M, Case M, Mašić D, Hennig H, McQuin C, Goodman A, Caicedo J, Wolkenhauer O, Summers H, Carpenter AE, Filby A, Rees P, Irving J. Label-Free Analyses of Minimal Residual Disease in ALL Using Deep Learning and Imaging Flow Cytometry Blood. 130: 1437-1437. DOI: 10.1182/Blood.V130.Suppl_1.1437.1437  0.748
Low-probability matches (unlikely to be authored by this person)
2023 Madi S, Xie F, Farhangi K, Hsu CY, Cheng SH, Aweda T, Radaram B, Slania S, Lambert T, Rambo M, Skedzielewski T, Cole A, Sherina V, McKearnan S, Tran H, ... ... Doan M, et al. MRI/PET multimodal imaging of the innate immune response in skeletal muscle and draining lymph node post vaccination in rats. Frontiers in Immunology. 13: 1081156. PMID 36713458 DOI: 10.3389/fimmu.2022.1081156  0.201
2017 Doan M. Zooming in on adipocytes: High and deep. Cytometry. Part a : the Journal of the International Society For Analytical Cytology. 91: 1051-1054. PMID 29072805 DOI: 10.1002/Cyto.A.23269  0.199
2018 Doan M, Simons JJ, Lilienthal K, Solomon T, Mitchell KA. Barriers to front propagation in laminar, three-dimensional fluid flows. Physical Review. E. 97: 033111. PMID 29776060 DOI: 10.1103/PhysRevE.97.033111  0.192
2022 Alsaid H, Cheng SH, Bi M, Xie F, Rambo M, Skedzielewski T, Hoang B, Mohanan S, Comroe D, Gehman A, Hsu CY, Farhangi K, Tran H, Sherina V, Doan M, et al. Immuno-PET Monitoring of CD8 T Cell Infiltration Post ICOS Agonist Antibody Treatment Alone and in Combination with PD-1 Blocking Antibody Using a Zr Anti-CD8 Mouse Minibody in EMT6 Syngeneic Tumor Mouse. Molecular Imaging and Biology. PMID 36266600 DOI: 10.1007/s11307-022-01781-7  0.18
2020 Vo PHT, Nguyen TDT, Tran HT, Nguyen YN, Doan MT, Nguyen PH, Lien GTK, To DC, Tran MH. Cytotoxic Components from the leaves of Erythrophleum fordii Induce Human Acute Leukemia Cell Apoptosis through Caspase 3 Activation and PARP Cleavage. Bioorganic & Medicinal Chemistry Letters. 127673. PMID 33161122 DOI: 10.1016/j.bmcl.2020.127673  0.084
2020 Ho-Pham LT, Doan MC, Van LH, Nguyen TV. Development of a model for identification of individuals with high risk of osteoporosis. Archives of Osteoporosis. 15: 111. PMID 32699999 DOI: 10.1007/s11657-020-00788-3  0.08
2007 Doan MH, Lott PL, Václavík M, Ueckert F. K-Box: automatic structuring and exchange of medical documents based on the clinical documentation architecture (CDA). Studies in Health Technology and Informatics. 129: 513-6. PMID 17911770  0.076
2023 Gutay-Tóth Z, Gellen G, Doan M, Eliason JF, Vincze J, Szente L, Fenyvesi F, Goda K, Vecsernyés M, Szabó G, Bacso Z. Cholesterol-Depletion-Induced Membrane Repair Carries a Raft Conformer of P-Glycoprotein to the Cell Surface, Indicating Enhanced Cholesterol Trafficking in MDR Cells, Which Makes Them Resistant to Cholesterol Modifications. International Journal of Molecular Sciences. 24. PMID 37569709 DOI: 10.3390/ijms241512335  0.057
2022 Aweda TA, Cheng SH, Lenhard SC, Sepp A, Skedzielewski T, Hsu CY, Marshall S, Haag H, Kehler J, Jagdale P, Peter A, Schmid MA, Gehman A, Doan M, Mayer AP, et al. In vivo biodistribution and pharmacokinetics of sotrovimab, a SARS-CoV-2 monoclonal antibody, in healthy cynomolgus monkeys. European Journal of Nuclear Medicine and Molecular Imaging. PMID 36305907 DOI: 10.1007/s00259-022-06012-3  0.047
2006 Walter JN, Fan LL, Bag R, Zhang H, Doan M, Mallory GB, Elidemir O. Serum KL-6 as a marker for bronchiolitis obliterans syndrome after lung transplantation. Transplantation. 82: 709-11. PMID 16969297 DOI: 10.1097/01.Tp.0000234952.46013.Df  0.044
2008 Martinez-Moczygemba M, Doan ML, Elidemir O, Fan LL, Cheung SW, Lei JT, Moore JP, Tavana G, Lewis LR, Zhu Y, Muzny DM, Gibbs RA, Huston DP. Pulmonary alveolar proteinosis caused by deletion of the GM-CSFRalpha gene in the X chromosome pseudoautosomal region 1. The Journal of Experimental Medicine. 205: 2711-6. PMID 18955567 DOI: 10.1084/Jem.20080759  0.043
2010 Haberman B, Doan ML, Smith EO, Schecter MG, Mallory GB, Elidemir O. Serum KL-6 level and the development of bronchiolitis obliterans syndrome in lung transplant recipients. Pediatric Transplantation. 14: 903-8. PMID 20667031 DOI: 10.1111/J.1399-3046.2010.01373.X  0.038
2015 Ho-Pham LT, Lai TQ, Mai LD, Doan MC, Pham HN, Nguyen TV. Prevalence and pattern of radiographic intervertebral disc degeneration in Vietnamese: a population-based study. Calcified Tissue International. 96: 510-7. PMID 25791571 DOI: 10.1007/s00223-015-9986-4  0.035
2016 Ho-Pham LT, Hans D, Doan MC, Mai LD, Nguyen TV. Genetic determinant of trabecular bone score (TBS) and bone mineral density: A bivariate analysis. Bone. PMID 27554425 DOI: 10.1016/j.bone.2016.08.015  0.032
2021 Hoang DK, Doan MC, Mai LD, Ho-Le TP, Ho-Pham LT. Burden of osteoporosis in Vietnam: An analysis of population risk. Plos One. 16: e0252592. PMID 34133437 DOI: 10.1371/journal.pone.0252592  0.027
2023 Hoang DK, Doan MC, Le NM, Nguyen HG, Ho-Pham LT, Nguyen TV. Prevalence of and risk factors for sarcopenia in community-dwelling people: The Vietnam Osteoporosis Study. Journal of Cachexia, Sarcopenia and Muscle. PMID 38146138 DOI: 10.1002/jcsm.13383  0.026
2007 Doan ML, Mallory GB, Kaplan SL, Dishop MK, Schecter MG, McKenzie ED, Heinle JS, Elidemir O. Treatment of adenovirus pneumonia with cidofovir in pediatric lung transplant recipients. The Journal of Heart and Lung Transplantation : the Official Publication of the International Society For Heart Transplantation. 26: 883-9. PMID 17845926 DOI: 10.1016/J.Healun.2007.06.009  0.024
2018 Ho-Pham LT, Ho-Le TP, Mai LD, Do TM, Doan MC, Nguyen TV. Sex-difference in bone architecture and bone fragility in Vietnamese. Scientific Reports. 8: 7707. PMID 29769605 DOI: 10.1038/s41598-018-26053-9  0.023
2015 Ho-Pham LT, Lai TQ, Mai LD, Doan MC, Nguyen TV. Body Composition in Individuals with Asymptomatic Osteoarthritis of the Knee. Calcified Tissue International. PMID 26590808 DOI: 10.1007/s00223-015-0080-8  0.022
2014 Ho-Pham LT, Lai TQ, Mai LD, Doan MC, Pham HN, Nguyen TV. Prevalence of radiographic osteoarthritis of the knee and its relationship to self-reported pain. Plos One. 9: e94563. PMID 24722559 DOI: 10.1371/journal.pone.0094563  0.013
2012 Smith A, Doan ML, Roy D, Pinsker JE. Adrenal insufficiency and growth failure secondary to inhaled corticosteroids: a paradoxical complication. Clinical Pediatrics. 51: 1194-6. PMID 22387925 DOI: 10.1177/0009922812437932  0.01
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