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Daniel K Weber - Publications

Affiliations: 
University of Minnesota, Twin Cities, Minneapolis, MN 
Area:
NMR, biophysics, structural biology
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36 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Gopinath T, Manu VS, Weber DK, Veglia G. PHRONESIS: a one-shot approach for sequential assignment of protein resonances by ultrafast MAS solid-state NMR spectroscopy. Chemphyschem : a European Journal of Chemical Physics and Physical Chemistry. PMID 35499980 DOI: 10.1002/cphc.202200127  0.506
2021 Reddy UV, Weber DK, Wang S, Larsen EK, Gopinath T, De Simone A, Robia S, Veglia G. A kink in DWORF helical structure controls the activation of the sarcoplasmic reticulum Ca-ATPase. Structure (London, England : 1993). PMID 34875216 DOI: 10.1016/j.str.2021.11.003  0.539
2021 Wang S, Gopinath T, Larsen EK, Weber DK, Walker C, Uddigiri VR, Mote KR, Sahoo SK, Periasamy M, Veglia G. Structural basis for sarcolipin's regulation of muscle thermogenesis by the sarcoplasmic reticulum Ca-ATPase. Science Advances. 7: eabi7154. PMID 34826239 DOI: 10.1126/sciadv.abi7154  0.436
2021 Weber DK, Reddy UV, Wang S, Larsen EK, Gopinath T, Gustavsson MB, Cornea RL, Thomas DD, De Simone A, Veglia G. Structural basis for allosteric control of the SERCA-Phospholamban membrane complex by Ca and phosphorylation. Elife. 10. PMID 33978571 DOI: 10.7554/eLife.66226  0.527
2021 Zhu S, Weber DK, Separovic F, Sani MA. Expression and purification of the native C-amidated antimicrobial peptide maculatin 1.1. Journal of Peptide Science : An Official Publication of the European Peptide Society. e3330. PMID 33843136 DOI: 10.1002/psc.3330  0.514
2021 Gopinath T, Weber D, Wang S, Larsen E, Veglia G. Solid-State NMR of Membrane Proteins in Lipid Bilayers: To Spin or Not To Spin? Accounts of Chemical Research. PMID 33655754 DOI: 10.1021/acs.accounts.0c00670  0.585
2020 Nelson SED, Weber DK, Rebbeck RT, Cornea RL, Veglia G, Thomas DD. Met125 is essential for maintaining the structural integrity of calmodulin's C-terminal domain. Scientific Reports. 10: 21320. PMID 33288831 DOI: 10.1038/s41598-020-78270-w  0.464
2020 Weber DK, Veglia G. A theoretical assessment of structure determination of multi-span membrane proteins by oriented sample solid-state NMR spectroscopy. Australian Journal of Chemistry. 73: 246-251. PMID 33162560 DOI: 10.1071/CH19307  0.575
2020 Ahmed R, Huang J, Weber DK, Gopinath T, Veglia G, Akimoto M, Khondker A, Rheinstadter MC, Huynh V, Wylie RG, Bozelli JC, Epand RM, Melacini G. Molecular Mechanism for the Suppression of Alpha Synuclein Membrane Toxicity by an Unconventional Extracellular Chaperone. Journal of the American Chemical Society. PMID 32383602 DOI: 10.1021/Jacs.0C01894  0.567
2020 Gopinath T, Weber DK, Veglia G. Multi-receiver solid-state NMR using polarization optimized experiments (POE) at ultrafast magic angle spinning. Journal of Biomolecular Nmr. PMID 32333193 DOI: 10.1007/S10858-020-00316-Y  0.504
2020 Weber DK, Wang S, Markley JL, Veglia G, Lee W. PISA-SPARKY: an interactive SPARKY plugin to analyze oriented solid-state NMR spectra of helical membrane proteins. Bioinformatics (Oxford, England). PMID 31930377 DOI: 10.1093/Bioinformatics/Btaa019  0.593
2020 Weber DK, Veglia G. A Theoretical Assessment of the Structure Determination of Multi-Span Membrane Proteins by Oriented Sample Solid-State NMR Spectroscopy Australian Journal of Chemistry. 73: 246. DOI: 10.1071/Ch19307  0.615
2020 Weber DK, Sanz-Hernandez M, Uddigiri VR, Larsen EK, Wang S, Gopinath T, De Simone A, Veglia G. Topological Allosteric Regulation of the Sarcoplasmic Reticulum Calcium Pump Phospholamban Biophysical Journal. 118: 99a. DOI: 10.1016/J.Bpj.2019.11.701  0.455
2020 Uddigiri VR, Weber D, Wang S, Larsen EK, Robia SL, Veglia G. Structure and Topology of the SERCA Regulator DWORF in Lipid Bilayers by Oriented Sample Solid-State NMR Biophysical Journal. 118: 209a. DOI: 10.1016/J.Bpj.2019.11.1249  0.557
2019 Larsen EK, Weber DK, Wang S, Gopinath T, Blackwell DJ, Dalton MP, Robia SL, Gao J, Veglia G. Intrinsically disordered HAX-1 regulates Ca cycling by interacting with lipid membranes and the phospholamban cytoplasmic region. Biochimica Et Biophysica Acta. Biomembranes. 183034. PMID 31400305 DOI: 10.1016/J.Bbamem.2019.183034  0.6
2019 Weber DK, Bader T, Larsen EK, Wang S, Gopinath T, Distefano M, Veglia G. Cysteine-ethylation of tissue-extracted membrane proteins as a tool to detect conformational states by solid-state NMR spectroscopy. Methods in Enzymology. 621: 281-304. PMID 31128784 DOI: 10.1016/Bs.Mie.2019.02.001  0.593
2019 Weber D, Wang S, Larsen E, Gopinath T, Veglia G. The Effect of Phosphorylation on the Structure and Topology of the SERCA-PLN Complex Biophysical Journal. 116: 114a. DOI: 10.1016/J.Bpj.2018.11.644  0.501
2019 Wang S, Tata G, Larsen E, Weber D, Veglia G. Mapping the Topological Change of Sarcolipin Upon Sarcoplasmic Reticulum Ca2+-ATPase Binding Along the Ca2+-Transport Cycle by Solid-State NMR Biophysical Journal. 116: 52a. DOI: 10.1016/J.Bpj.2018.11.326  0.497
2019 Ha KN, Johnson HM, Schneiderhan A, Weber D, Roith J, Veglia G. Utilizing Empirical Data and Structural Dynamics Prediction to Optimize Rational Design of Therapeutic Phospholamban Mutations to Tune SERCA Function Biophysical Journal. 116: 487a. DOI: 10.1016/J.Bpj.2018.11.2629  0.674
2019 Larsen EK, Weber D, Wang S, Robia S, Kranias E, Veglia G. Intrinsically Disordered HAX-1 Regulates Phospholamban in Membranes Biophysical Journal. 116: 202a. DOI: 10.1016/J.Bpj.2018.11.1114  0.538
2018 Kael MA, Weber DK, Separovic F, Sani MA. Aggregation kinetics in the presence of brain lipids of Aβ(1-40) cleaved from a soluble fusion protein. Biochimica Et Biophysica Acta. PMID 29526708 DOI: 10.1016/J.Bbamem.2018.03.005  0.552
2017 Weber DK, Sani M, Downton MT, Collins JG, Separovic F, Keene FR. Membrane Insertion of a Dinuclear Ruthenium Complex and Implications for Antibacterial Activity Biophysical Journal. 112: 380a. DOI: 10.1016/J.Bpj.2016.11.2067  0.649
2016 Weber DK, Sani MA, Downton MT, Separovic F, Keene FR, Collins JG. Membrane insertion of a dinuclear polypyridylruthenium(II) complex revealed by solid-state NMR and molecular dynamics simulation - implications for selective antibacterial activity. Journal of the American Chemical Society. PMID 27786471 DOI: 10.1021/Jacs.6B09996  0.694
2016 Gordon SE, Weber DK, Downton MT, Wagner J, Perugini MA. Dynamic Modelling Reveals 'Hotspots' on the Pathway to Enzyme-Substrate Complex Formation. Plos Computational Biology. 12: e1004811. PMID 26967332 DOI: 10.1371/Journal.Pcbi.1004811  0.317
2015 Sani MA, Henriques ST, Weber D, Separovic F. Bacteria may cope differently to similar membrane damage caused by the Australian tree frog antimicrobial peptide maculatin 1.1. The Journal of Biological Chemistry. PMID 26100634 DOI: 10.1074/Jbc.M115.643262  0.575
2015 Weber DK, Yao S, Rojko N, Anderluh G, Lybrand TP, Downton MT, Wagner J, Separovic F. Characterization of the Lipid-Binding Site of Equinatoxin II by NMR and Molecular Dynamics Simulation. Biophysical Journal. 108: 1987-96. PMID 25902438 DOI: 10.1016/J.Bpj.2015.03.024  0.571
2014 Weber DK, Sani MA, Gehman JD. A routine method for cloning, expressing and purifying Aβ(1-42) for structural NMR studies. Amino Acids. 46: 2415-26. PMID 25027618 DOI: 10.1007/S00726-014-1796-X  0.677
2014 Yao S, Weber DK, Separovic F, Keizer DW. Measuring translational diffusion coefficients of peptides and proteins by PFG-NMR using band-selective RF pulses. European Biophysics Journal : Ebj. 43: 331-9. PMID 24824112 DOI: 10.1007/S00249-014-0965-X  0.514
2014 Weber D, Yao S, Anderluh G, Lybrand T, Downton M, Wagner J, Separovic F. Modelling the Interactions of Equinatoxin II with Micelles Biophysical Journal. 106: 297a. DOI: 10.1016/J.Bpj.2013.11.566  0.577
2013 Sani MA, Weber DK, Delaglio F, Separovic F, Gehman JD. A practical implementation of de-Pake-ing via weighted Fourier transformation. Peerj. 1: e30. PMID 23638366 DOI: 10.7717/Peerj.30  0.675
2013 Weber DK, Sani M, Separovic F, Gehman JD. Membrane Interactions of the Alzheimer's Disease Aβ42 Peptide and a Soluble Aβ42 Fusion Protein Biophysical Journal. 104: 238a. DOI: 10.1016/J.Bpj.2012.11.1346  0.731
2012 Li F, Weber DK, Morgan JL, Collins JG, Keene FR. An approach to therapeutic agents through selective targeting of destabilised nucleic acid duplex sequences. Dalton Transactions (Cambridge, England : 2003). 41: 6528-35. PMID 22311066 DOI: 10.1039/C2Dt12146H  0.553
2012 Weber DK, Gehman JD, Separovic F, Sani MA. Copper modulation of amyloid beta 42 interactions with model membranes Australian Journal of Chemistry. 65: 472-479. DOI: 10.1071/Ch12015  0.725
2012 Sani M, Weber DK, Gehman JD, Separovic F. Copper Modulates Aβ42 Aggregation in Model Membranes Biophysical Journal. 102: 488a-489a. DOI: 10.1016/J.Bpj.2011.11.2678  0.74
2011 Mulyana Y, Weber DK, Buck DP, Motti CA, Collins JG, Keene FR. Oligonuclear polypyridylruthenium(II) complexes incorporating flexible polar and non-polar bridges: synthesis, DNA-binding and cytotoxicity. Dalton Transactions (Cambridge, England : 2003). 40: 1510-23. PMID 21218244 DOI: 10.1039/C0Dt01250E  0.537
2010 Pisani MJ, Weber DK, Heimann K, Collins JG, Keene FR. Selective mitochondrial accumulation of cytotoxic dinuclear polypyridyl ruthenium(II) complexes. Metallomics : Integrated Biometal Science. 2: 393-6. PMID 21072384 DOI: 10.1039/C004922K  0.515
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