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Rizal F. Hariadi, Ph.D. - Publications

Affiliations: 
1998-2003 Physics Washington State University, Pullman, WA, United States 
 2002-2011 Applied Physics California Institute of Technology, Pasadena, CA 
 2011-2014 Cell and Developmental Biology University of Michigan, Ann Arbor, Ann Arbor, MI 
 2015-2016 Harvard University, Cambridge, MA, United States 
 2016- Physics Arizona State University, Tempe, AZ, United States 
Area:
Biophysics
Website:
http://www.rizalhariadi.com
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28 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Sentosa J, Djutanta F, Horne B, Showkeir D, Rezvani R, Leff C, Pradhan S, Hariadi RF. Gradient-mixing LEGO robots for purifying DNA origami nanostructures of multiple components by rate-zonal centrifugation. Plos One. 18: e0283134. PMID 37467178 DOI: 10.1371/journal.pone.0283134  0.401
2021 Shetty RM, Brady SR, Rothemund PWK, Hariadi RF, Gopinath A. Bench-Top Fabrication of Single-Molecule Nanoarrays by DNA Origami Placement. Acs Nano. PMID 34228915 DOI: 10.1021/acsnano.1c01150  0.391
2019 Green LN, Subramanian HKK, Mardanlou V, Kim J, Hariadi RF, Franco E. Autonomous dynamic control of DNA nanostructure self-assembly. Nature Chemistry. PMID 31011170 DOI: 10.1038/S41557-019-0251-8  0.713
2017 Hariadi RF, Appukutty AJ, Sivaramakrishnan S. O-Myo! An O-Shaped Myosin Gliding Assay for Characterizing Long-Term Actin-Myosin Behaviors Biophysical Journal. 112: 263a. DOI: 10.1016/J.Bpj.2016.11.1432  0.554
2017 Mardanlou V, Yaghoubi KC, Green LN, Subramanian HKK, Hariadi RF, Kim J, Franco E. A coarse-grained model captures the temporal evolution of DNA nanotube length distributions Natural Computing. 17: 183-199. DOI: 10.1007/S11047-017-9657-7  0.649
2016 Hariadi RF, Appukutty AJ, Sivaramakrishnan S. Engineering Circular Gliding of Actin Filaments Along Myosin-Patterned DNA Nanotube Rings to Study Long-Term Actin-Myosin Behaviors. Acs Nano. PMID 27571140 DOI: 10.1021/Acsnano.6B01294  0.595
2016 Sommese RF, Hariadi RF, Kim K, Liu M, Tyska MJ, Sivaramakrishnan S. Patterning Protein Complexes on DNA Nanostructures Using a GFP-Nanobody. Protein Science : a Publication of the Protein Society. PMID 27538185 DOI: 10.1002/Pro.3020  0.63
2015 Hariadi RF, Yurke B, Winfree E. Thermodynamics and kinetics of DNA nanotube polymerization from single-filament measurements. Chemical Science. 6: 2252-2267. PMID 29308139 DOI: 10.1039/C3Sc53331J  0.778
2015 Hariadi RF, Winfree E, Yurke B. Determining hydrodynamic forces in bursting bubbles using DNA nanotube mechanics. Proceedings of the National Academy of Sciences of the United States of America. 112: E6086-95. PMID 26504222 DOI: 10.1073/Pnas.1424673112  0.692
2015 Verma V, Mallik L, Hariadi RF, Sivaramakrishnan S, Skiniotis G, Joglekar AP. Using Protein Dimers to Maximize the Protein Hybridization Efficiency with Multisite DNA Origami Scaffolds. Plos One. 10: e0137125. PMID 26348722 DOI: 10.1371/Journal.Pone.0137125  0.586
2015 Hariadi RF, Sommese RF, Adhikari AS, Taylor RE, Sutton S, Spudich JA, Sivaramakrishnan S. Mechanical coordination in motor ensembles revealed using engineered artificial myosin filaments. Nature Nanotechnology. PMID 26149240 DOI: 10.1038/Nnano.2015.132  0.679
2015 Green LN, Subramanian HK, Mardanlou V, Kim J, Hariadi RF, Franco E. 72 Dynamic self-assembly of DNA nanotubes. Journal of Biomolecular Structure & Dynamics. 33: 46-7. PMID 26103283 DOI: 10.1080/07391102.2015.1032689  0.726
2015 Tee YH, Shemesh T, Thiagarajan V, Hariadi RF, Anderson KL, Page C, Volkmann N, Hanein D, Sivaramakrishnan S, Kozlov MM, Bershadsky AD. Cellular chirality arising from the self-organization of the actin cytoskeleton. Nature Cell Biology. 17: 445-57. PMID 25799062 DOI: 10.1038/Ncb3137  0.563
2015 Hariadi RF, Sommese RF, Sivaramakrishnan S. Tuning myosin-driven sorting on cellular actin networks. Elife. 4. PMID 25738229 DOI: 10.7554/Elife.05472  0.521
2015 Hariadi RF, Sommese RF, Sivaramakrishnan S. Author response: Tuning myosin-driven sorting on cellular actin networks Elife. DOI: 10.7554/Elife.05472.018  0.513
2015 Hariadi RF, Yurke B, Winfree E. Thermodynamics and kinetics of DNA nanotube polymerization from single-filament measurements Chemical Science. 6: 2252-2267. DOI: 10.1039/c3sc53331j  0.754
2014 Hariadi RF, Cale M, Sivaramakrishnan S. Myosin lever arm directs collective motion on cellular actin network. Proceedings of the National Academy of Sciences of the United States of America. 111: 4091-6. PMID 24591646 DOI: 10.1073/Pnas.1315923111  0.549
2014 Hariadi RF, Cale M, Sivaramakrishnan S. Myosin Lever Arm Directs the Collective Movement Patterns of Motor Proteins Biophysical Journal. 106: 180a-181a. DOI: 10.1016/J.Bpj.2013.11.1021  0.547
2013 Zhang DY, Hariadi RF, Choi HMT, Winfree E. Integrating DNA strand-displacement circuitry with DNA tile self-assembly Nature Communications. 4. PMID 23756381 DOI: 10.1038/Ncomms2965  0.785
2012 Evans CG, Hariadi RF, Winfree E. Direct atomic force microscopy observation of DNA tile crystal growth at the single-molecule level Journal of the American Chemical Society. 134: 10485-10492. PMID 22694312 DOI: 10.1021/Ja301026Z  0.778
2010 Hariadi RF, Yurke B. Elongational-flow-induced scission of DNA nanotubes in laminar flow. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 82: 046307. PMID 21230390 DOI: 10.1103/Physreve.82.046307  0.51
2010 Hariadi RF, Yurke B, Winfree E. Toward De Novo Recapitulation of Cytoskeleton Dynamics with DNA Nanotubes Biophysical Journal. 98. DOI: 10.1016/J.Bpj.2009.12.3014  0.782
2008 Yin P, Hariadi RF, Sahu S, Choi HM, Park SH, Labean TH, Reif JH. Programming DNA tube circumferences. Science (New York, N.Y.). 321: 824-6. PMID 18687961 DOI: 10.1126/Science.1157312  0.737
2008 Fujibayashi K, Hariadi R, Park SH, Winfree E, Murata S. Toward reliable algorithmic self-assembly of DNA tiles: A fixed-width cellular automaton pattern Nano Letters. 8: 1791-1797. PMID 18162000 DOI: 10.1021/Nl0722830  0.764
2008 Fujibayashi K, Hariadi R, Sung HP, Winfree E, Murata S. Erratum: Toward reliable algorithmic self-assembly of DNA tiles: A fixed-width cellular automaton pattern (Nano Letters (2008) 8: 10 (1791)) Nano Letters. 8. DOI: 10.1021/Nl802586E  0.745
2007 Yin P, Hariadi RF, Sahu S, Choi HMT, Park SH, Walters B, LaBean TH, Reif JH. Abstract: Single strand DNA tiles and molecular tubes with precisely programmable circumferences 4th Conference On Foundations of Nanoscience: Self-Assembled Architectures and Devices, Fnano 2007. 71-78.  0.722
2002 Hariadi R, Langford SC, Dickinson JT. Controlling Nanometer-Scale Crystal Growth on a Model Biomaterial with a Scanning Force Microscope Langmuir. 18: 7773-7776. DOI: 10.1021/La025984F  0.511
2000 Dickinson JT, Hariadi RF, Scudiero L, Langford SC. Scanning force microscope study of detachment of nanometer adhering particulates Materials Science and Engineering A. 288: 182-186. DOI: 10.1016/S0921-5093(00)00866-2  0.495
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