☰

James S. Prell, Ph.D. - Publications

Affiliations: 
2011 Chemistry University of California, Berkeley, Berkeley, CA, United States 
Area:
mass spectrometry
Tree Info Similar researchers PubMed Report error

42 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Prell JS. Modeling collisional kinetic energy damping, heating, and cooling of ions in mass spectrometers: a tutorial perspective. International Journal of Mass Spectrometry. 504. PMID 39072228 DOI: 10.1016/j.ijms.2024.117290  0.331
2024 Shepherd SO, Green AW, Resendiz ES, Newton KR, Kurulugama RT, Prell JS. Effects of Nano-Electrospray Ionization Emitter Position on Unintentional In-Source Activation of Peptide and Protein Ions. Journal of the American Society For Mass Spectrometry. 35: 498-507. PMID 38374644 DOI: 10.1021/jasms.3c00371  0.36
2022 Rolland AD, Biberic LS, Prell JS. Investigation of Charge-State-Dependent Compaction of Protein Ions with Native Ion Mobility-Mass Spectrometry and Theory. Journal of the American Society For Mass Spectrometry. PMID 35073092 DOI: 10.1021/jasms.1c00351  0.363
2021 Cheung See Kit M, Shepherd SO, Prell JS, Webb IK. Experimental Determination of Activation Energies for Covalent Bond Formation via Ion/Ion Reactions and Competing Processes. Journal of the American Society For Mass Spectrometry. PMID 33730481 DOI: 10.1021/jasms.1c00025  0.396
2020 Wilson JW, Donor MT, Shepherd SO, Prell JS. Increasing Collisional Activation of Protein Complexes Using Smaller Aperture Source Sampling cones on a Synapt Q-IM-TOF Instrument with a Stepwave Source. Journal of the American Society For Mass Spectrometry. PMID 32628844 DOI: 10.1021/Jasms.0C00117  0.38
2020 Miller ZM, Zhang JD, Donald WA, Prell JS. Gas-Phase Protonation Thermodynamics of Biological Lipids: Experiment, Theory, and Implications. Analytical Chemistry. PMID 32628014 DOI: 10.1021/Acs.Analchem.0C00613  0.337
2020 Donor MT, Shepherd SO, Prell JS. Rapid Determination of Activation Energies for Gas-Phase Protein Unfolding and Dissociation in a Q-IM-ToF Mass Spectrometer. Journal of the American Society For Mass Spectrometry. 31: 602-610. PMID 32126776 DOI: 10.1021/Jasms.9B00055  0.436
2020 Zhang JD, Donor MT, Rolland AD, Leeming MG, Wang H, Trevitt AJ, Kabir KMM, Prell JS, Donald WA. Protonation isomers of highly charged protein ions can be separated in FAIMS-MS International Journal of Mass Spectrometry. 116425. DOI: 10.1016/J.Ijms.2020.116425  0.656
2019 Rolland AD, Prell JS. Computational Insights into Compaction of Gas-Phase Protein and Protein Complex Ions in Native Ion Mobility-Mass Spectrometry. Trends in Analytical Chemistry : Trac. 116: 282-291. PMID 31983791 DOI: 10.1016/J.Trac.2019.04.023  0.411
2019 Townsend JA, Keener JE, Miller Z, Prell JS, Marty MT. Imidazole Derivatives Improve Charge Reduction and Stabilization for Native Mass Spectrometry. Analytical Chemistry. PMID 31638377 DOI: 10.1021/Acs.Analchem.9B04263  0.376
2019 Wilson JW, Rolland AD, Klausen GM, Prell JS. Ion mobility-mass spectrometry reveals that α-hemolysin from Staphylococcus aureus simultaneously forms hexameric and heptameric complexes in detergent micelle solutions. Analytical Chemistry. PMID 31282652 DOI: 10.1021/Acs.Analchem.9B02243  0.425
2019 Donor MT, Mroz AM, Prell JS. Experimental and theoretical investigation of overall energy deposition in surface-induced unfolding of protein ions. Chemical Science. 10: 4097-4106. PMID 31049192 DOI: 10.1039/C9Sc00644C  0.41
2019 Prell JS, Cleary SP. Liberating Native Mass Spectrometry from Dependence on Volatile Salt Buffers by Use of Gábor Transform. Chemphyschem : a European Journal of Chemical Physics and Physical Chemistry. PMID 30618194 DOI: 10.1002/Cphc.201900022  0.423
2018 Cleary SP, Li H, Bagal D, Loo JA, Campuzano IDG, Prell JS. Extracting Charge and Mass Information from Highly Congested Mass Spectra Using Fourier-Domain Harmonics. Journal of the American Society For Mass Spectrometry. PMID 30003534 DOI: 10.1007/S13361-018-2018-7  0.363
2017 Donor MT, Ewing SA, Zenaidee MA, Donald WA, Prell JS. Extended Protein Ions are Formed by the Chain Ejection Model in Chemical Supercharging Electrospray Ionization. Analytical Chemistry. PMID 28368095 DOI: 10.1021/Acs.Analchem.7B00673  0.671
2017 Ewing SA, Donor MT, Wilson JW, Prell JS. Collidoscope: An Improved Tool for Computing Collisional Cross-Sections with the Trajectory Method. Journal of the American Society For Mass Spectrometry. PMID 28194738 DOI: 10.1007/S13361-017-1594-2  0.463
2016 Cleary SP, Thompson AM, Prell JS. Fourier Analysis Method for Analyzing Highly Congested Mass Spectra of Ion Populations with Repeated Subunits. Analytical Chemistry. PMID 27213759 DOI: 10.1021/Acs.Analchem.6B01088  0.403
2016 Taber BN, Kislitsyn DA, Gervasi CF, Mills JM, Rosenfield AE, Zhang L, Mannsfeld SC, Prell JS, Briseno AL, Nazin GV. Real-space visualization of conformation-independent oligothiophene electronic structure. The Journal of Chemical Physics. 144: 194703. PMID 27208961 DOI: 10.1063/1.4949765  0.312
2016 Hartle MD, Prell JS, Pluth MD. Spectroscopic investigations into the binding of hydrogen sulfide to synthetic picket-fence porphyrins. Dalton Transactions (Cambridge, England : 2003). PMID 26869340 DOI: 10.1039/C5Dt04563K  0.318
2016 Kislitsyn DA, Taber BN, Gervasi CF, Zhang L, Mannsfeld SC, Prell JS, Briseno AL, Nazin GV. Oligothiophene wires: impact of torsional conformation on the electronic structure. Physical Chemistry Chemical Physics : Pccp. PMID 26804474 DOI: 10.1039/C5Cp07092A  0.363
2016 Borja LJ, Zürch M, Pemmaraju CD, Schultze M, Ramasesha K, Gandman A, Prell JS, Prendergast D, Neumark DM, Leone SR. Extreme ultraviolet transient absorption of solids from femtosecond to attosecond timescales Journal of the Optical Society of America B. 33: C57. DOI: 10.1364/Josab.33.000C57  0.33
2012 Chang TM, Prell JS, Warrick ER, Williams ER. Where's the charge? Protonation sites in gaseous ions change with hydration. Journal of the American Chemical Society. 134: 15805-13. PMID 22954377 DOI: 10.1021/Ja304929H  0.611
2011 Sterling HJ, Prell JS, Cassou CA, Williams ER. Protein conformation and supercharging with DMSO from aqueous solution. Journal of the American Society For Mass Spectrometry. 22: 1178-86. PMID 21953100 DOI: 10.1007/S13361-011-0116-X  0.744
2011 Prell JS, Chang TM, Biles JA, Berden G, Oomens J, Williams ER. Isomer population analysis of gaseous ions from infrared multiple photon dissociation kinetics. The Journal of Physical Chemistry. A. 115: 2745-51. PMID 21410158 DOI: 10.1021/Jp2004166  0.578
2011 Prell JS, O'Brien JT, Williams ER. Structural and electric field effects of ions in aqueous nanodrops. Journal of the American Chemical Society. 133: 4810-8. PMID 21405134 DOI: 10.1021/Ja108341T  0.647
2010 Prell JS, Correra TC, Chang TM, Biles JA, Williams ER. Entropy drives an attached water molecule from the C- to N-terminus on protonated proline. Journal of the American Chemical Society. 132: 14733-5. PMID 20886878 DOI: 10.1021/Ja106167D  0.575
2010 O'Brien JT, Prell JS, Bush MF, Williams ER. Sulfate ion patterns water at long distance. Journal of the American Chemical Society. 132: 8248-9. PMID 20518523 DOI: 10.1021/Ja1024113  0.703
2010 Prell JS, Chang TM, O'Brien JT, Williams ER. Hydration isomers of protonated phenylalanine and derivatives: relative stabilities from infrared photodissociation. Journal of the American Chemical Society. 132: 7811-9. PMID 20469865 DOI: 10.1021/Ja102765W  0.572
2010 Prell JS, O'Brien JT, Williams ER. IRPD spectroscopy and ensemble measurements: effects of different data acquisition and analysis methods. Journal of the American Society For Mass Spectrometry. 21: 800-9. PMID 20185332 DOI: 10.1016/J.Jasms.2010.01.010  0.568
2010 Prell JS, Flick TG, Oomens J, Berden G, Williams ER. Coordination of trivalent metal cations to peptides: results from IRMPD spectroscopy and theory. The Journal of Physical Chemistry. A. 114: 854-60. PMID 19950916 DOI: 10.1021/Jp909366A  0.733
2010 O'Brien JT, Prell JS, Berden G, Oomens J, Williams ER. Effects of anions on the zwitterion stability of Glu, His and Arg investigated by IRMPD spectroscopy and theory International Journal of Mass Spectrometry. 297: 116-123. DOI: 10.1016/J.Ijms.2010.07.003  0.579
2009 Bush MF, O'Brien JT, Prell JS, Wu CC, Saykally RJ, Williams ER. Hydration of alkaline earth metal dications: effects of metal ion size determined using infrared action spectroscopy. Journal of the American Chemical Society. 131: 13270-7. PMID 19754186 DOI: 10.1021/Ja901011X  0.743
2009 Donald WA, Leib RD, Demireva M, O'Brien JT, Prell JS, Williams ER. Directly relating reduction energies of gaseous Eu(H2O)n(3+), n = 55-140, to aqueous solution: the absolute SHE potential and real proton solvation energy. Journal of the American Chemical Society. 131: 13328-37. PMID 19711981 DOI: 10.1021/Ja902815V  0.753
2009 Prell JS, O'Brien JT, Steill JD, Oomens J, Williams ER. Structures of protonated dipeptides: the role of arginine in stabilizing salt bridges. Journal of the American Chemical Society. 131: 11442-9. PMID 19624125 DOI: 10.1021/Ja901870D  0.58
2009 Prell JS, Williams ER. Structures of thermal, mass-selected water clusters probed with hydrophobic ion tags and infrared photodissociation spectroscopy. Journal of the American Chemical Society. 131: 4110-9. PMID 19292492 DOI: 10.1021/Ja809414A  0.623
2009 O'Brien JT, Prell JS, Steill JD, Oomens J, Williams ER. Changes in binding motif of protonated heterodimers containing valine and amines investigated using IRMPD spectroscopy between 800 and 3700 cm(-1) and theory. Journal of the American Chemical Society. 131: 3905-12. PMID 19256491 DOI: 10.1021/Ja809928H  0.596
2009 Prell JS, Demireva M, Oomens J, Williams ER. Role of sequence in salt-bridge formation for alkali metal cationized GlyArg and ArgGly investigated with IRMPD spectroscopy and theory. Journal of the American Chemical Society. 131: 1232-42. PMID 19117387 DOI: 10.1021/Ja808177Z  0.6
2008 O'Brien JT, Prell JS, Steill JD, Oomens J, Williams ER. Interactions of mono- and divalent metal ions with aspartic and glutamic acid investigated with IR photodissociation spectroscopy and theory. The Journal of Physical Chemistry. A. 112: 10823-30. PMID 18828579 DOI: 10.1021/Jp805787E  0.602
2008 Prell JS, O'Brien JT, Holm AI, Leib RD, Donald WA, Williams ER. Electron capture by a hydrated gaseous peptide: effects of water on fragmentation and molecular survival. Journal of the American Chemical Society. 130: 12680-9. PMID 18761457 DOI: 10.1021/Ja8022434  0.774
2008 O'Brien JT, Prell JS, Holm AI, Williams ER. Effects of electron kinetic energy and ion-electron inelastic collisions in electron capture dissociation measured using ion nanocalorimetry. Journal of the American Society For Mass Spectrometry. 19: 772-9. PMID 18372190 DOI: 10.1016/J.Jasms.2008.02.010  0.601
2007 Bush MF, Prell JS, Saykally RJ, Williams ER. One water molecule stabilizes the cationized arginine zwitterion. Journal of the American Chemical Society. 129: 13544-53. PMID 17929811 DOI: 10.1021/Ja073796B  0.753
2007 Bush MF, O'Brien JT, Prell JS, Saykally RJ, Williams ER. Infrared spectroscopy of cationized arginine in the gas phase: direct evidence for the transition from nonzwitterionic to zwitterionic structure. Journal of the American Chemical Society. 129: 1612-22. PMID 17249666 DOI: 10.1021/Ja066335J  0.743
Show low-probability matches.