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Jeremy L. England, Ph.D. - Publications

Affiliations: 
2011- Physics Massachusetts Institute of Technology, Cambridge, MA, United States 
Area:
theoretical methods to understand the physical properties of biological molecules
Website:
http://web.mit.edu/physics/people/faculty/england_jeremy.html
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28 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Sarkar S, England JL. Design of conditions for self-replication. Physical Review. E. 100: 022414. PMID 31574610 DOI: 10.1103/Physreve.100.022414  0.302
2018 Bisker G, England JL. Nonequilibrium associative retrieval of multiple stored self-assembly targets. Proceedings of the National Academy of Sciences of the United States of America. PMID 30348806 DOI: 10.1073/Pnas.1805769115  0.323
2018 Marsland R, England JL. Active regeneration unites high- and low-temperature features in cooperative self-assembly. Physical Review. E. 98: 022411. PMID 30253561 DOI: 10.1103/Physreve.98.022411  0.367
2018 Marsland R, England JL. Limits of predictions in thermodynamic systems: a review. Reports On Progress in Physics. 81: 16601. PMID 28976362 DOI: 10.1088/1361-6633/Aa9101  0.344
2017 Kachman T, Owen JA, England JL. Self-Organized Resonance during Search of a Diverse Chemical Space. Physical Review Letters. 119: 038001. PMID 28777611 DOI: 10.1103/Physrevlett.119.038001  0.329
2017 Horowitz JM, England JL. Spontaneous fine-tuning to environment in many-species chemical reaction networks. Proceedings of the National Academy of Sciences of the United States of America. PMID 28674005 DOI: 10.1073/Pnas.1700617114  0.309
2017 Horowitz JM, Zhou K, England JL. Minimum energetic cost to maintain a target nonequilibrium state. Physical Review. E. 95: 042102. PMID 28505816 DOI: 10.1103/Physreve.95.042102  0.352
2017 Gura Sadovsky R, Brielle S, Kaganovich D, England JL. Measurement of Rapid Protein Diffusion in the Cytoplasm by Photo-Converted Intensity Profile Expansion. Cell Reports. 18: 2795-2806. PMID 28297680 DOI: 10.1016/J.Celrep.2017.02.063  0.327
2016 Perunov N, Marsland RA, England JL. Statistical physics of adaptation Physical Review X. 6. DOI: 10.1103/Physrevx.6.021036  0.34
2015 England JL. Dissipative adaptation in driven self-assembly. Nature Nanotechnology. 10: 919-23. PMID 26530021 DOI: 10.1038/Nnano.2015.250  0.347
2015 Brock KP, Abraham AC, Amen T, Kaganovich D, England JL. Structural Basis for Modulation of Quality Control Fate in a Marginally Stable Protein. Structure (London, England : 1993). 23: 1169-78. PMID 26027734 DOI: 10.1016/J.Str.2015.04.015  0.386
2015 Marsland R, England J. Far-from-equilibrium distribution from near-steady-state work fluctuations Physical Review E - Statistical, Nonlinear, and Soft Matter Physics. 92. DOI: 10.1103/Physreve.92.052120  0.32
2014 Perunov N, England JL. Quantitative theory of hydrophobic effect as a driving force of protein structure. Protein Science : a Publication of the Protein Society. 23: 387-99. PMID 24408023 DOI: 10.1002/Pro.2420  0.437
2012 Spokoini R, Moldavski O, Nahmias Y, England JL, Schuldiner M, Kaganovich D. Confinement to organelle-associated inclusion structures mediates asymmetric inheritance of aggregated protein in budding yeast. Cell Reports. 2: 738-47. PMID 23022486 DOI: 10.1016/J.Celrep.2012.08.024  0.34
2011 England JL. Allostery in protein domains reflects a balance of steric and hydrophobic effects. Structure (London, England : 1993). 19: 967-75. PMID 21742263 DOI: 10.1016/J.Str.2011.04.009  0.45
2011 England JL, Haran G. Role of solvation effects in protein denaturation: from thermodynamics to single molecules and back. Annual Review of Physical Chemistry. 62: 257-77. PMID 21219136 DOI: 10.1146/Annurev-Physchem-032210-103531  0.462
2011 England JL, Kaganovich D. Polyglutamine shows a urea-like affinity for unfolded cytosolic protein. Febs Letters. 585: 381-4. PMID 21176779 DOI: 10.1016/J.Febslet.2010.12.023  0.386
2010 England JL, Haran G. To fold or expand--a charged question. Proceedings of the National Academy of Sciences of the United States of America. 107: 14519-20. PMID 20682745 DOI: 10.1073/Pnas.1008673107  0.427
2010 England JL, Pande VS. Charge, hydrophobicity, and confined water: putting past simulations into a simple theoretical framework. Biochemistry and Cell Biology = Biochimie Et Biologie Cellulaire. 88: 359-69. PMID 20453936 DOI: 10.1139/o09-187  0.502
2009 Lucent D, England J, Pande V. Inside the chaperonin toolbox: theoretical and computational models for chaperonin mechanism. Physical Biology. 6: 015003. PMID 19208937 DOI: 10.1088/1478-3975/6/1/015003  0.541
2008 England JL, Lucent D, Pande VS. A role for confined water in chaperonin function. Journal of the American Chemical Society. 130: 11838-9. PMID 18710231 DOI: 10.1021/Ja802248M  0.574
2008 England JL, Pande VS, Haran G. Chemical denaturants inhibit the onset of dewetting. Journal of the American Chemical Society. 130: 11854-5. PMID 18707183 DOI: 10.1021/Ja803972G  0.562
2008 England JL, Pande VS. Potential for modulation of the hydrophobic effect inside chaperonins. Biophysical Journal. 95: 3391-9. PMID 18599630 DOI: 10.1529/Biophysj.108.131037  0.579
2008 England J, Lucent D, Pande V. Rattling the cage: computational models of chaperonin-mediated protein folding. Current Opinion in Structural Biology. 18: 163-9. PMID 18291636 DOI: 10.1016/J.Sbi.2007.12.013  0.583
2008 England JL, Park S, Pande VS. Theory for an order-driven disruption of the liquid state in water. The Journal of Chemical Physics. 128: 044503. PMID 18247965 DOI: 10.1063/1.2823129  0.498
2003 England JL, Shakhnovich BE, Shakhnovich EI. Natural selection of more designable folds: a mechanism for thermophilic adaptation. Proceedings of the National Academy of Sciences of the United States of America. 100: 8727-31. PMID 12843403 DOI: 10.1073/Pnas.1530713100  0.42
2003 England JL, Shakhnovich EI. Structural determinant of protein designability. Physical Review Letters. 90: 218101. PMID 12786593 DOI: 10.1103/Physrevlett.90.218101  0.408
2002 Larson SM, England JL, Desjarlais JR, Pande VS. Thoroughly sampling sequence space: large-scale protein design of structural ensembles. Protein Science : a Publication of the Protein Society. 11: 2804-13. PMID 12441379 DOI: 10.1110/Ps.0203902  0.605
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