Amy C. Harms - Publications

Leiden University, Leiden, Netherlands 
BioMedical Metabolomics

46 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Fu J, Cuppen BV, Welsing PM, van Wietmarschen H, Harms AC, Berger R, Koval S, Fritsch-Stork RD, Bijlsma JW, Hankemeier T, van der Greef J, Lafeber FP. Differences between serum polar lipid profiles of male and female rheumatoid arthritis patients in response to glucocorticoid treatment. Inflammopharmacology. PMID 27682325 DOI: 10.1007/s10787-016-0284-1  0.64
2016 Fu J, Schoeman JC, Harms AC, van Wietmarschen HA, Vreeken RJ, Berger R, Cuppen BV, Lafeber FP, van der Greef J, Hankemeier T. Metabolomics profiling of the free and total oxidised lipids in urine by LC-MS/MS: application in patients with rheumatoid arthritis. Analytical and Bioanalytical Chemistry. PMID 27405874 DOI: 10.1007/s00216-016-9742-2  0.64
2016 Zhang Y, Guallar E, Blasco-Colmenares E, Harms AC, Vreeken RJ, Hankemeier T, Tomaselli GF, Cheng A. Serum-Based Oxylipins Are Associated with Outcomes in Primary Prevention Implantable Cardioverter Defibrillator Patients. Plos One. 11: e0157035. PMID 27281224 DOI: 10.1371/journal.pone.0157035  0.64
2015 He M, van Wijk E, Berger R, Wang M, Strassburg K, Schoeman JC, Vreeken RJ, van Wietmarschen H, Harms AC, Kobayashi M, Hankemeier T, van der Greef J. Collagen Induced Arthritis in DBA/1J Mice Associates with Oxylipin Changes in Plasma. Mediators of Inflammation. 2015: 543541. PMID 26604432 DOI: 10.1155/2015/543541  0.64
2015 Bojic LA, McLaren DG, Harms AC, Hankemeier T, Dane A, Wang SP, Rosa R, Previs SF, Johns DG, Castro-Perez JM. Quantitative profiling of oxylipins in plasma and atherosclerotic plaques of hypercholesterolemic rabbits. Analytical and Bioanalytical Chemistry. PMID 26511226 DOI: 10.1007/s00216-015-9105-4  0.64
2015 Koster MP, Vreeken RJ, Harms AC, Dane AD, Kuc S, Schielen PC, Hankemeier T, Berger R, Visser GH, Pennings JL. First-Trimester Serum Acylcarnitine Levels to Predict Preeclampsia: A Metabolomics Approach. Disease Markers. 2015: 857108. PMID 26146448 DOI: 10.1155/2015/857108  0.64
2015 Rueda-Rincon N, Bloch K, Derua R, Vyas R, Harms A, Hankemeier T, Khan NA, Dehairs J, Bagadi M, Binda MM, Waelkens E, Marine JC, Swinnen JV. p53 attenuates AKT signaling by modulating membrane phospholipid composition. Oncotarget. PMID 26061814  0.64
2015 Alves RDAM, Dane AD, Harms A, Strassburg K, Seifar RM, Verdijk LB, Kersten S, Berger R, Hankemeier T, Vreeken RJ. Global profiling of the muscle metabolome: method optimization, validation and application to determine exercise-induced metabolic effects Metabolomics. 11: 271-285. DOI: 10.1007/s11306-014-0701-7  0.64
2014 Ellero-Simatos S, Lewis JP, Georgiades A, Yerges-Armstrong LM, Beitelshees AL, Horenstein RB, Dane A, Harms AC, Ramaker R, Vreeken RJ, Perry CG, Zhu H, Sànchez CL, Kuhn C, Ortel TL, et al. Pharmacometabolomics reveals that serotonin is implicated in aspirin response variability. Cpt: Pharmacometrics & Systems Pharmacology. 3: e125. PMID 25029353 DOI: 10.1038/psp.2014.22  0.64
2014 Kuc S, Koster MP, Pennings JL, Hankemeier T, Berger R, Harms AC, Dane AD, Schielen PC, Visser GH, Vreeken RJ. Metabolomics profiling for identification of novel potential markers in early prediction of preeclampsia. Plos One. 9: e98540. PMID 24873829 DOI: 10.1371/journal.pone.0098540  0.64
2014 Dane AD, Hendriks MM, Reijmers TH, Harms AC, Troost J, Vreeken RJ, Boomsma DI, van Duijn CM, Slagboom EP, Hankemeier T. Integrating metabolomics profiling measurements across multiple biobanks. Analytical Chemistry. 86: 4110-4. PMID 24650176 DOI: 10.1021/ac404191a  0.64
2012 Zhang N, Venkateshwaran M, Boersma M, Harms A, Howes-Podoll M, den Os D, Ané JM, Sussman MR. Metabolomic profiling reveals suppression of oxylipin biosynthesis during the early stages of legume-rhizobia symbiosis. Febs Letters. 586: 3150-8. PMID 22796495 DOI: 10.1016/j.febslet.2012.06.046  0.64
2009 Huttlin EL, Chen X, Barrett-Wilt GA, Hegeman AD, Halberg RB, Harms AC, Newton MA, Dove WF, Sussman MR. Discovery and validation of colonic tumor-associated proteins via metabolic labeling and stable isotopic dilution. Proceedings of the National Academy of Sciences of the United States of America. 106: 17235-40. PMID 19805096 DOI: 10.1073/pnas.0909282106  0.64
2009 Wu XJ, Sabat G, Brown JF, Zhang M, Taft A, Peterson N, Harms A, Yoshino TP. Proteomic analysis of Schistosoma mansoni proteins released during in vitro miracidium-to-sporocyst transformation. Molecular and Biochemical Parasitology. 164: 32-44. PMID 19095013 DOI: 10.1016/j.molbiopara.2008.11.005  0.64
2007 Hegeman AD, Schulte CF, Cui Q, Lewis IA, Huttlin EL, Eghbalnia H, Harms AC, Ulrich EL, Markley JL, Sussman MR. Stable isotope assisted assignment of elemental compositions for metabolomics. Analytical Chemistry. 79: 6912-21. PMID 17708672 DOI: 10.1021/ac070346t  0.64
2007 Nelson CJ, Huttlin EL, Hegeman AD, Harms AC, Sussman MR. Implications of 15N-metabolic labeling for automated peptide identification in Arabidopsis thaliana. Proteomics. 7: 1279-92. PMID 17443642 DOI: 10.1002/pmic.200600832  0.64
2007 Huttlin EL, Hegeman AD, Harms AC, Sussman MR. Comparison of full versus partial metabolic labeling for quantitative proteomics analysis in Arabidopsis thaliana. Molecular & Cellular Proteomics : McP. 6: 860-81. PMID 17293592 DOI: 10.1074/mcp.M600347-MCP200  0.64
2007 Huttlin EL, Hegeman AD, Harms AC, Sussman MR. Prediction of error associated with false-positive rate determination for peptide identification in large-scale proteomics experiments using a combined reverse and forward peptide sequence database strategy. Journal of Proteome Research. 6: 392-8. PMID 17203984 DOI: 10.1021/pr0603194  0.64
2006 Nelson CJ, Hegeman AD, Harms AC, Sussman MR. A quantitative analysis of Arabidopsis plasma membrane using trypsin-catalyzed (18)O labeling. Molecular & Cellular Proteomics : McP. 5: 1382-95. PMID 16635983 DOI: 10.1074/mcp.M500414-MCP200  0.64
2005 Jeon WB, Aceti DJ, Bingman CA, Vojtik FC, Olson AC, Ellefson JM, McCombs JE, Sreenath HK, Blommel PG, Seder KD, Burns BT, Geetha HV, Harms AC, Sabat G, Sussman MR, et al. High-throughput purification and quality assurance of Arabidopsis thaliana proteins for eukaryotic structural genomics. Journal of Structural and Functional Genomics. 6: 143-7. PMID 16211511 DOI: 10.1007/s10969-005-1908-7  0.64
2004 Hegeman AD, Harms AC, Sussman MR, Bunner AE, Harper JF. An isotope labeling strategy for quantifying the degree of phosphorylation at multiple sites in proteins. Journal of the American Society For Mass Spectrometry. 15: 647-53. PMID 15121193 DOI: 10.1016/j.jasms.2003.12.019  0.64
2002 Tang KH, Harms A, Frey PA. Identification of a novel pyridoxal 5'-phosphate binding site in adenosylcobalamin-dependent lysine 5,6-aminomutase from Porphyromonas gingivalis. Biochemistry. 41: 8767-76. PMID 12093296 DOI: 10.1021/bi020255k  0.64
2002 Nelson CJ, Hegeman AD, Harms AC, Sussman MR. Implementation of neutral loss experiments in the characterization of the Arabidopsis thaliana phosphorylome by one and two dimensional LC ESI Q-TOF MS/MS Proceedings 50th Asms Conference On Mass Spectrometry and Allied Topics. 235-236.  0.64
2001 Misenheimer TM, Hahr AJ, Harms AC, Annis DS, Mosher DF. Disulfide Connectivity of Recombinant C-terminal Region of Human Thrombospondin 2 Journal of Biological Chemistry. 276: 45882-45887. PMID 11590138 DOI: 10.1074/jbc.M104218200  0.64
2001 Moll TS, Harms AC, Elfarra AA. Advances in the mass spectrometry of hemoglobin adducts: Global analysis of the covalent binding of butadiene monoxide Chemico-Biological Interactions. 135: 667-674. PMID 11397420 DOI: 10.1016/S0009-2797(01)00206-X  0.64
2001 Vener AV, Harms A, Sussman MR, Vierstra RD. Mass spectrometric resolution of reversible protein phosphorylation in photosynthetic membranes of Arabidopsis thaliana. The Journal of Biological Chemistry. 276: 6959-66. PMID 11113141 DOI: 10.1074/jbc.M009394200  0.64
2000 Moll TS, Harms AC, Elfarra AA. A comprehensive structural analysis of hemoglobin adducts formed after in vitro exposure of erythrocytes to butadiene monoxide Chemical Research in Toxicology. 13: 1103-1113. PMID 11087432 DOI: 10.1021/tx000151f  0.64
2000 Meyer Zu Schwabedissen H, Nemitz G, Harms A, Saint-Mont U, Krauth J. Reliability of geriatric basic assessment | Untersuchung zur reliabilitat des geriatrischen basisassessments Zeitschrift Fur Gerontologie Und Geriatrie. 33: 1-8. PMID 10768252 DOI: 10.1007/s003910050001  0.64
1999 Csuhai E, Juliano MA, Pyrek JS, Harms AC, Juliano L, Hersh LB. New fluorogenic substrates for N-arginine dibasic convertase Analytical Biochemistry. 269: 149-154. PMID 10094786 DOI: 10.1006/abio.1999.4033  0.64
1999 Ma YA, Sih CJ, Harms A. Enzymatic mechanism of thyroxine biosynthesis. Identification of the 'lost three-carbon fragment' [14] Journal of the American Chemical Society. 121: 8967-8968. DOI: 10.1021/ja992052y  0.64
1998 Pasa Tolić L, Harms AC, Anderson GA, Smith RD, Willie A, Jorns MS. Electrospray ionization-mass spectrometry characterization of heterotetrameric sarcosine oxidase. Journal of the American Society For Mass Spectrometry. 9: 510-5. PMID 9879365 DOI: 10.1016/S1044-0305(98)00011-7  0.64
1998 Liu C, Tolić LP, Hofstadler SA, Harms AC, Smith RD, Kang C, Sinha N. Probing RegA/RNA interactions using electrospray ionization-fourier transform ion cyclotron resonance-mass spectrometry. Analytical Biochemistry. 262: 67-76. PMID 9735149 DOI: 10.1006/abio.1998.2753  0.64
1996 Liu C, Wu Q, Harms AC, Smith RD. On-line microdialysis sample cleanup for electrospray ionization mass spectrometry of nucleic acid samples. Analytical Chemistry. 68: 3295-9. PMID 8797389 DOI: 10.1021/ac960286j  0.64
1996 Cheng X, Harms AC, Goudreau PN, Terwilliger TC, Smith RD. Direct measurement of oligonucleotide binding stoichiometry of gene V protein by mass spectrometry. Proceedings of the National Academy of Sciences of the United States of America. 93: 7022-7. PMID 8692937 DOI: 10.1073/pnas.93.14.7022  0.64
1996 Cheng X, Morin PE, Harms AC, Bruce JE, Ben-David Y, Smith RD. Mass spectrometric characterization of sequence-specific complexes of DNA and transcription factor PU.1 DNA binding domain. Analytical Biochemistry. 239: 35-40. PMID 8660622 DOI: 10.1006/abio.1996.0287  0.64
1996 Cheng X, Hofstadler SA, Bruce JE, Harms AC, Chen R, Smith RD, Terwilliger TC, Goudreau PN. Electrospray ionization with high performance fourier transform ion cyclotron resonance mass spectrometry for the study of noncovalent biomolecular complexes Techniques in Protein Chemistry. 7: 13-22. DOI: 10.1016/S1080-8914(96)80005-6  0.64
1996 Severs JC, Harms AC, Smith RD. A new high-performance interface for capillary electrophoresis/electrospray ionization mass spectrometry Rapid Communications in Mass Spectrometry. 10: 1175-1178. DOI: 10.1002/(SICI)1097-0231(19960731)10:10<1175::AID-RCM636>3.0.CO;2-L  0.64
1994 Harms AC, Khanna SN, Chen B, Castleman AW. Dehydrogenation reactions in Mg+(H2O)n clusters The Journal of Chemical Physics. 100: 3540-3544.  0.88
1993 Keesee RG, Chen B, Harms AC, Castleman AW. Reactions of metal oxide anions International Journal of Mass Spectrometry and Ion Processes. 123: 225-231. DOI: 10.1016/0168-1176(93)87101-W  0.88
1991 Castleman AW, Harms AC, Leuchtner RE. Gas phase reactivity of thermal metal clusters Zeitschrift FüR Physik D Atoms, Molecules and Clusters. 19: 343-346. DOI: 10.1007/BF01448325  0.88
1991 Leuchtner RE, Harms AC, Castleman AW. Aluminum cluster reactions The Journal of Chemical Physics. 94: 1093-1101.  0.88
1990 Leuchtner RE, Farley RW, Harms AC, Funasaka H, Castleman AW. Studies of group III cation reactions: consecutive association of methanol to Al+, Ga+, and In+ International Journal of Mass Spectrometry and Ion Processes. 102: 199-212. DOI: 10.1016/0168-1176(90)80060-G  0.88
1990 Leuchtner RE, Harms AC, Castleman AW. Metal cluster cation reactions: Carbon monoxide association to Cu n + ions The Journal of Chemical Physics. 92: 6527-6537.  0.88
1990 Small GW, Harms AC, Kroutil RT, Ditillo JT, Loerop WR. Design of optimized finite impulse response digital filters for use with passive fourier transform infrared interferograms Analytical Chemistry. 62: 1768-1777.  0.88
1990 Harms AC, Leuchtner RE, Sigsworth SW, Castleman AW. Gas-phase reactivity of metal alloy clusters Journal of the American Chemical Society. 112: 5673-5674.  0.88
1989 Leuchtner RE, Harms AC, Castleman AW. Thermal metal cluster anion reactions: Behavior of aluminum clusters with oxygen The Journal of Chemical Physics. 91: 2753-2754.  0.88
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