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Sheldon R. Dennis, Ph.D. - Publications

Affiliations: 
2002 Boston University, Boston, MA, United States 
Area:
Biomedical Engineering, Molecular Biology, General Biophysics, Pharmaceutical Chemistry
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8 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2007 Naïm M, Bhat S, Rankin KN, Dennis S, Chowdhury SF, Siddiqi I, Drabik P, Sulea T, Bayly CI, Jakalian A, Purisima EO. Solvated interaction energy (SIE) for scoring protein-ligand binding affinities. 1. Exploring the parameter space. Journal of Chemical Information and Modeling. 47: 122-33. PMID 17238257 DOI: 10.1021/ci600406v  0.481
2003 Silberstein M, Dennis S, Brown L, Kortvelyesi T, Clodfelter K, Vajda S. Identification of substrate binding sites in enzymes by computational solvent mapping. Journal of Molecular Biology. 332: 1095-113. PMID 14499612 DOI: 10.1016/J.Jmb.2003.08.019  0.661
2003 Kortvelyesi T, Silberstein M, Dennis S, Vajda S. Improved mapping of protein binding sites. Journal of Computer-Aided Molecular Design. 17: 173-86. PMID 13677484 DOI: 10.1023/A:1025369923311  0.685
2003 Kortvelyesi T, Dennis S, Silberstein M, Brown L, Vajda S. Algorithms for computational solvent mapping of proteins. Proteins. 51: 340-51. PMID 12696046 DOI: 10.1002/Prot.10287  0.653
2002 Dennis S, Vajda S. Semiglobal simplex optimization and its application to determining the preferred solvation sites of proteins. Journal of Computational Chemistry. 23: 319-34. PMID 11908495 DOI: 10.1002/Jcc.10026  0.55
2002 Dennis S, Kortvelyesi T, Vajda S. Computational mapping identifies the binding sites of organic solvents on proteins. Proceedings of the National Academy of Sciences of the United States of America. 99: 4290-5. PMID 11904374 DOI: 10.1073/Pnas.062398499  0.654
2000 Gatchell DW, Dennis S, Vajda S. Discrimination of near-native protein structures from misfolded models by empirical free energy functions. Proteins. 41: 518-34. PMID 11056039 DOI: 10.1002/1097-0134(20001201)41:4<518::Aid-Prot90>3.0.Co;2-6  0.563
2000 Dennis S, Camacho CJ, Vajda S. Continuum electrostatic analysis of preferred solvation sites around proteins in solution. Proteins. 38: 176-88. PMID 10656264 DOI: 10.1002/(Sici)1097-0134(20000201)38:2<176::Aid-Prot6>3.0.Co;2-O  0.608
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