Michael Evan Hughes - Publications

Affiliations: 
2007-2009 Biology University of Missouri - Saint Louis 

19 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Li J, Yu RY, Emran F, Chen BE, Hughes ME. Achilles-Mediated and Sex-Specific Regulation of Circadian mRNA Rhythms in Drosophila. Journal of Biological Rhythms. 748730419830845. PMID 30803307 DOI: 10.1177/0748730419830845  1
2018 Terry EE, Zhang X, Hoffmann C, Hughes LD, Lewis SA, Li J, Wallace MJ, Riley L, Douglas CM, Gutierrez-Montreal MA, Lahens NF, Gong MC, Andrade F, Esser KA, Hughes ME. Transcriptional profiling reveals extraordinary diversity among skeletal muscle tissues. Elife. 7. PMID 29809149 DOI: 10.7554/eLife.34613  1
2017 Hughes ME, Abruzzi KC, Allada R, Anafi R, Arpat AB, Asher G, Baldi P, de Bekker C, Bell-Pedersen D, Blau J, Brown S, Ceriani MF, Chen Z, Chiu JC, Cox J, et al. Guidelines for Genome-Scale Analysis of Biological Rhythms. Journal of Biological Rhythms. 748730417728663. PMID 29098954 DOI: 10.1177/0748730417728663  1
2016 Li J, Terry EE, Fejer E, Gamba D, Hartmann N, Logsdon J, Michalski D, Rois LE, Scuderi MJ, Kunst M, Hughes ME. Achilles is a circadian clock-controlled gene that regulates immune function in Drosophila. Brain, Behavior, and Immunity. PMID 27856350 DOI: 10.1016/j.bbi.2016.11.012  1
2016 Wu G, Anafi RC, Hughes ME, Kornacker K, Hogenesch JB. MetaCycle: an integrated R package to evaluate periodicity in large scale data. Bioinformatics (Oxford, England). PMID 27378304 DOI: 10.1093/bioinformatics/btw405  1
2015 Tranel HR, Schroder EA, England J, Black WS, Bush H, Hughes ME, Esser KA, Clasey JL. Physical activity, and not fat mass is a primary predictor of circadian parameters in young men. Chronobiology International. 32: 832-41. PMID 26101893 DOI: 10.3109/07420528.2015.1043011  1
2015 Li J, Grant GR, Hogenesch JB, Hughes ME. Considerations for RNA-seq analysis of circadian rhythms. Methods in Enzymology. 551: 349-67. PMID 25662464 DOI: 10.1016/bs.mie.2014.10.020  1
2014 Zhang R, Lahens NF, Ballance HI, Hughes ME, Hogenesch JB. A circadian gene expression atlas in mammals: implications for biology and medicine. Proceedings of the National Academy of Sciences of the United States of America. 111: 16219-24. PMID 25349387 DOI: 10.1073/pnas.1408886111  1
2014 Anafi RC, Lee Y, Sato TK, Venkataraman A, Ramanathan C, Kavakli IH, Hughes ME, Baggs JE, Growe J, Liu AC, Kim J, Hogenesch JB. Machine learning helps identify CHRONO as a circadian clock component. Plos Biology. 12: e1001840. PMID 24737000 DOI: 10.1371/journal.pbio.1001840  1
2014 Hughes ME, Peeler J, Hogenesch JB, Trojanowski JQ. The growth and impact of Alzheimer disease centers as measured by social network analysis. Jama Neurology. 71: 412-20. PMID 24514750 DOI: 10.1001/jamaneurol.2013.6225  1
2012 Hughes ME, Hong HK, Chong JL, Indacochea AA, Lee SS, Han M, Takahashi JS, Hogenesch JB. Brain-specific rescue of Clock reveals system-driven transcriptional rhythms in peripheral tissue. Plos Genetics. 8: e1002835. PMID 22844252 DOI: 10.1371/journal.pgen.1002835  1
2012 Hughes ME, Grant GR, Paquin C, Qian J, Nitabach MN. Deep sequencing the circadian and diurnal transcriptome of Drosophila brain. Genome Research. 22: 1266-81. PMID 22472103 DOI: 10.1101/gr.128876.111  1
2012 Silver AC, Arjona A, Hughes ME, Nitabach MN, Fikrig E. Circadian expression of clock genes in mouse macrophages, dendritic cells, and B cells. Brain, Behavior, and Immunity. 26: 407-13. PMID 22019350 DOI: 10.1016/j.bbi.2011.10.001  1
2011 Miyazaki M, Schroder E, Edelmann SE, Hughes ME, Kornacker K, Balke CW, Esser KA. Age-associated disruption of molecular clock expression in skeletal muscle of the spontaneously hypertensive rat. Plos One. 6: e27168. PMID 22076133 DOI: 10.1371/journal.pone.0027168  1
2011 Xu K, DiAngelo JR, Hughes ME, Hogenesch JB, Sehgal A. The circadian clock interacts with metabolic physiology to influence reproductive fitness. Cell Metabolism. 13: 639-54. PMID 21641546 DOI: 10.1016/j.cmet.2011.05.001  1
2010 Hughes ME, Peeler J, Hogenesch JB. Network dynamics to evaluate performance of an academic institution. Science Translational Medicine. 2: 53ps49. PMID 20944088 DOI: 10.1126/scitranslmed.3001580  1
2010 Hughes ME, Hogenesch JB, Kornacker K. JTK_CYCLE: an efficient nonparametric algorithm for detecting rhythmic components in genome-scale data sets. Journal of Biological Rhythms. 25: 372-80. PMID 20876817 DOI: 10.1177/0748730410379711  1
2010 Baggs JE, Hughes ME, Hogenesch JB. The network as the target. Wiley Interdisciplinary Reviews. Systems Biology and Medicine. 2: 127-33. PMID 20836017 DOI: 10.1002/wsbm.57  1
2009 Hughes ME, DiTacchio L, Hayes KR, Vollmers C, Pulivarthy S, Baggs JE, Panda S, Hogenesch JB. Harmonics of circadian gene transcription in mammals. Plos Genetics. 5: e1000442. PMID 19343201 DOI: 10.1371/journal.pgen.1000442  1
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