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Ravi D. Barabote, Ph.D. - Publications

Affiliations: 
2003 Texas Tech University, Lubbock, TX 
Area:
Microbiology Biology, Molecular Biology, Genetics
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21 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2013 Nakatsu CH, Barabote R, Thompson S, Bruce D, Detter C, Brettin T, Han C, Beasley F, Chen W, Konopka A, Xie G. Complete genome sequence of Arthrobacter sp. strain FB24. Standards in Genomic Sciences. 9: 106-16. PMID 24501649 DOI: 10.4056/Sigs.4438185  0.382
2011 Berry AM, Mendoza-Herrera A, Guo YY, Hayashi J, Persson T, Barabote R, Demchenko K, Zhang S, Pawlowski K. New perspectives on nodule nitrogen assimilation in actinorhizal symbioses. Functional Plant Biology : Fpb. 38: 645-652. PMID 32480919 DOI: 10.1071/Fp11095  0.346
2011 Barabote RD, Thekkiniath J, Strauss RE, Vediyappan G, Fralick JA, San Francisco MJ. Xenobiotic efflux in bacteria and fungi: a genomics update. Advances in Enzymology and Related Areas of Molecular Biology. 77: 237-306. PMID 21692371 DOI: 10.1002/9780470920541.Ch6  0.602
2010 Nalbantoglu U, Sayood K, Dempsey MP, Iwen PC, Francesconi SC, Barabote RD, Xie G, Brettin TS, Hinrichs SH, Fey PD. Large direct repeats flank genomic rearrangements between a new clinical isolate of Francisella tularensis subsp. tularensis A1 and Schu S4. Plos One. 5: e9007. PMID 20140244 DOI: 10.1371/Journal.Pone.0009007  0.314
2009 Barabote RD, Xie G, Brettin TS, Hinrichs SH, Fey PD, Jay JJ, Engle JL, Godbole SD, Noronha JM, Scheuermann RH, Zhou LW, Lion C, Dempsey MP. Complete genome sequence of Francisella tularensis subspecies holarctica FTNF002-00. Plos One. 4: e7041. PMID 19756146 DOI: 10.1371/Journal.Pone.0007041  0.405
2009 Tamang DG, Rabus R, Barabote RD, Saier MH. Comprehensive analyses of transport proteins encoded within the genome of "Aromatoleum aromaticum" strain EbN1. The Journal of Membrane Biology. 229: 53-90. PMID 19506936 DOI: 10.1007/S00232-009-9168-2  0.349
2009 Barabote RD, Xie G, Leu DH, Normand P, Necsulea A, Daubin V, Médigue C, Adney WS, Xu XC, Lapidus A, Parales RE, Detter C, Pujic P, Bruce D, Lavire C, et al. Complete genome of the cellulolytic thermophile Acidothermus cellulolyticus 11B provides insights into its ecophysiological and evolutionary adaptations. Genome Research. 19: 1033-43. PMID 19270083 DOI: 10.1101/Gr.084848.108  0.431
2009 Ward NL, Challacombe JF, Janssen PH, Henrissat B, Coutinho PM, Wu M, Xie G, Haft DH, Sait M, Badger J, Barabote RD, Bradley B, Brettin TS, Brinkac LM, Bruce D, et al. Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils. Applied and Environmental Microbiology. 75: 2046-56. PMID 19201974 DOI: 10.1128/Aem.02294-08  0.431
2008 Pierce E, Xie G, Barabote RD, Saunders E, Han CS, Detter JC, Richardson P, Brettin TS, Das A, Ljungdahl LG, Ragsdale SW. The complete genome sequence of Moorella thermoacetica (f. Clostridium thermoaceticum). Environmental Microbiology. 10: 2550-73. PMID 18631365 DOI: 10.1111/J.1462-2920.2008.01679.X  0.378
2008 Martinez D, Berka RM, Henrissat B, Saloheimo M, Arvas M, Baker SE, Chapman J, Chertkov O, Coutinho PM, Cullen D, Danchin EG, Grigoriev IV, Harris P, Jackson M, Kubicek CP, ... ... Barabote R, et al. Genome sequencing and analysis of the biomass-degrading fungus Trichoderma reesei (syn. Hypocrea jecorina). Nature Biotechnology. 26: 553-60. PMID 18454138 DOI: 10.1038/Nbt1403  0.389
2008 Martinez D, Berka RM, Henrissat B, Saloheimo M, Arvas M, Baker SE, Chapman J, Chertkov O, Coutinho PM, Cullen D, Danchin EGJ, Grigoriev IV, Harris P, Jackson M, Kubicek CP, ... ... Barabote R, et al. Genome sequencing and analysis of the biomass-degrading fungus Trichoderma reesei (syn. Hypocrea jecorina) (Nature Biotechnology (2008) 26, (553-560)) Nature Biotechnology. 26: 1193. DOI: 10.1038/Nbt1008-1193A  0.35
2007 Barabote RD, Rendulic S, Schuster SC, Saier MH. Comprehensive analysis of transport proteins encoded within the genome of Bdellovibrio bacteriovorus. Genomics. 90: 424-46. PMID 17706914 DOI: 10.1016/J.Ygeno.2007.06.002  0.352
2007 Lorca GL, Barabote RD, Zlotopolski V, Tran C, Winnen B, Hvorup RN, Stonestrom AJ, Nguyen E, Huang LW, Kim DS, Saier MH. Transport capabilities of eleven gram-positive bacteria: comparative genomic analyses. Biochimica Et Biophysica Acta. 1768: 1342-66. PMID 17490609 DOI: 10.1016/J.Bbamem.2007.02.007  0.434
2007 Ravirala RS, Barabote RD, Wheeler DM, Reverchon S, Tatum O, Malouf J, Liu H, Pritchard L, Hedley PE, Birch PR, Toth IK, Payton P, San Francisco MJ. Efflux pump gene expression in Erwinia chrysanthemi is induced by exposure to phenolic acids. Molecular Plant-Microbe Interactions : Mpmi. 20: 313-20. PMID 17378434 DOI: 10.1094/Mpmi-20-3-0313  0.672
2006 Makarova K, Slesarev A, Wolf Y, Sorokin A, Mirkin B, Koonin E, Pavlov A, Pavlova N, Karamychev V, Polouchine N, Shakhova V, Grigoriev I, Lou Y, Rohksar D, Lucas S, ... ... Barabote R, et al. Comparative genomics of the lactic acid bacteria. Proceedings of the National Academy of Sciences of the United States of America. 103: 15611-6. PMID 17030793 DOI: 10.1073/Pnas.0607117103  0.439
2005 Barabote RD, Saier MH. Comparative genomic analyses of the bacterial phosphotransferase system. Microbiology and Molecular Biology Reviews : Mmbr. 69: 608-34. PMID 16339738 DOI: 10.1128/Mmbr.69.4.608-634.2005  0.347
2005 Hagen AR, Barabote RD, Saier MH. The bestrophin family of anion channels: identification of prokaryotic homologues. Molecular Membrane Biology. 22: 291-302. PMID 16154901 DOI: 10.1080/09687860500129711  0.384
2005 Stonestrom A, Barabote RD, Gonzalez CF, Saier MH. Bioinformatic analyses of bacterial HPr kinase/phosphorylase homologues Research in Microbiology. 156: 443-451. PMID 15808949 DOI: 10.1016/J.Resmic.2004.10.010  0.377
2005 Zhang Z, Gosset G, Barabote R, Gonzalez CS, Cuevas WA, Saier MH. Functional interactions between the carbon and iron utilization regulators, Crp and Fur, in Escherichia coli. Journal of Bacteriology. 187: 980-90. PMID 15659676 DOI: 10.1128/Jb.187.3.980-990.2005  0.314
2003 Barabote RD, Johnson OL, Zetina E, San Francisco SK, Fralick JA, San Francisco MJ. Erwinia chrysanthemi tolC is involved in resistance to antimicrobial plant chemicals and is essential for phytopathogenesis. Journal of Bacteriology. 185: 5772-8. PMID 13129948 DOI: 10.1128/Jb.185.19.5772-5778.2003  0.679
2000 Duarté X, Anderson CT, Grimson M, Barabote RD, Strauss RE, Gollahon LS, San Francisco MJ. Erwinia chrysanthemi strains cause death of human gastrointestinal cells in culture and express an intimin-like protein. Fems Microbiology Letters. 190: 81-6. PMID 10981694 DOI: 10.1111/J.1574-6968.2000.TB09266.X  0.64
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