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Shannon Yan, PhD - Publications

Affiliations: 
2015-2023 QB3/Biophysics HHMI, UC Berkeley, Berkeley, CA, United States 
 2024- Biology Stanford University, Palo Alto, CA 
Area:
Molecular and Cell Biology, Biophysics, Physical Chemistry, Biochemistry
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22 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 De Belly H, Yan S, Borja da Rocha H, Ichbiah S, Town JP, Zager PJ, Estrada DC, Meyer K, Turlier H, Bustamante C, Weiner OD. Cell protrusions and contractions generate long-range membrane tension propagation. Cell. PMID 37311454 DOI: 10.1016/j.cell.2023.05.014  0.584
2022 Cao X, Liu K, Yan S, Li S, Li Y, Jin T, Liu S. Mechanical regulation of the helicase activity of Zika virus NS3. Biophysical Journal. PMID 35923103 DOI: 10.1016/j.bpj.2022.07.030  0.297
2022 Bustamante C, Yan S. The Development of Single Molecule Force Spectroscopy: From Polymer Biophysics to Molecular Machines. Quarterly Reviews of Biophysics. 1-105. PMID 35916314 DOI: 10.1017/S0033583522000087  0.564
2019 Fukuda S, Yan S, Komi Y, Sun M, Gabizon R, Bustamante C. The Biogenesis of SRP RNA Is Modulated by an RNA Folding Intermediate Attained during Transcription. Molecular Cell. PMID 31706702 DOI: 10.1016/J.Molcel.2019.10.006  0.625
2018 Schöneberg J, Pavlin MR, Yan S, Righini M, Lee IH, Carlson LA, Bahrami AH, Goldman DH, Ren X, Hummer G, Bustamante C, Hurley JH. ATP-dependent force generation and membrane scission by ESCRT-III and Vps4. Science (New York, N.Y.). 362: 1423-1428. PMID 30573630 DOI: 10.1126/Science.Aat1839  0.611
2018 Schöneberg J, Yan S, Bahrami A, Righini M, Lee I, Remec Pavlin M, Carlson L, Goldman D, Hummer G, Bustamante C, Hurley J. ESCRT Membrane Scission Revealed by Optical Tweezers Biophysical Journal. 114: 554a. DOI: 10.1016/J.Bpj.2017.11.3028  0.584
2018 Fukuda S, Yan S, Sun M, Bustamante CJ. Alternative SRP RNA Folded States Accessible Co-transcriptionally can Modulate SRP Protein-Targeting Activity Biophysical Journal. 114. DOI: 10.1016/J.Bpj.2017.11.1198  0.611
2015 Yan S, Wen JD, Bustamante C, Tinoco I. Ribosome excursions during mRNA translocation mediate broad branching of frameshift pathways. Cell. 160: 870-81. PMID 25703095 DOI: 10.1016/J.Cell.2015.02.003  0.721
2014 Liu T, Kaplan A, Alexander L, Yan S, Wen JD, Lancaster L, Wickersham CE, Fredrick K, Fredrik K, Noller H, Tinoco I, Bustamante CJ. Direct measurement of the mechanical work during translocation by the ribosome. Elife. 3: e03406. PMID 25114092 DOI: 10.7554/Elife.03406  0.748
2014 Liu T, Kaplan A, Alexander L, Yan S, Wen J, Lancaster L, Wickersham CE, Fredrick K, Noller H, Tinoco I, Bustamante CJ. Correction: Direct measurement of the mechanical work during translocation by the ribosome Elife. 3. DOI: 10.7554/Elife.04563  0.746
2014 Liu T, Kaplan A, Alexander L, Yan S, Wen J, Lancaster L, Wickersham CE, Fredrick K, Noller H, Tinoco I, Bustamante CJ. Author response: Direct measurement of the mechanical work during translocation by the ribosome Elife. DOI: 10.7554/Elife.03406.010  0.74
2014 Liu T, Kaplan A, Alexander L, Yan S, Wen JD, Lancaster L, Wickersham CE, Fredrick K, Noller H, Tinoco I, Bustamante CJ. Direct measurement of the mechanical work during translocation by the ribosome Elife. 3: 1-12. DOI: 10.7554/eLife.03406  0.748
2014 Yan S, Wen J, Lancaster L, Noller H, Bustamante C, Tinoco I. Deciphering Ribosomal Frameshifting Dynamics Biophysical Journal. 106: 239a. DOI: 10.1016/J.Bpj.2013.11.1400  0.721
2013 Tinoco I, Kim HK, Yan S. Frameshifting dynamics. Biopolymers. 99: 1147-66. PMID 23722586 DOI: 10.1002/bip.22293  0.636
2013 Tinoco I, Kim H, Yan S. Erratum: “Frameshifting dynamics,” Biopolymers 99, 1147-1166 (2013) Biopolymers. 101: 306-306. DOI: 10.1002/Bip.22424  0.599
2009 Riedel J, Yan S, Liu K. Mode specificity in reactions of Cl with CH2 stretch-excited CH2D2(v1, v6 = 1). The Journal of Physical Chemistry. A. 113: 14270-6. PMID 19480395 DOI: 10.1021/Jp902629H  0.533
2008 Yan S, Wu YT, Liu K. Tracking the energy flow along the reaction path. Proceedings of the National Academy of Sciences of the United States of America. 105: 12667-72. PMID 18664573 DOI: 10.1073/Pnas.0800220105  0.546
2008 Riedel J, Yan S, Kawamata H, Liu K. A simple yet effective multipass reflector for vibrational excitation in molecular beams. The Review of Scientific Instruments. 79: 033105. PMID 18376995 DOI: 10.1063/1.2894211  0.522
2007 Zhang B, Yan S, Liu K. Unraveling multicomponent images by extended cross correlation analysis. The Journal of Physical Chemistry. A. 111: 9263-8. PMID 17636971 DOI: 10.1021/Jp072916Z  0.512
2007 Yan S, Wu YT, Zhang B, Yue XF, Liu K. Do vibrational excitations of CHD3 preferentially promote reactivity toward the chlorine atom? Science (New York, N.Y.). 316: 1723-6. PMID 17588925 DOI: 10.1126/Science.1142313  0.547
2007 Yan SS, Wu YT, Liu K. Disentangling mode-specific reaction dynamics from overlapped images. Physical Chemistry Chemical Physics : Pccp. 9: 250-4. PMID 17186068 DOI: 10.1039/B614307E  0.544
2007 Yan S, Liu K. Pair-correlated Dynamics of Cl+CHD3(v1=1) Reaction: Effects of Probe Laser Frequency Chinese Journal of Chemical Physics. 20: 333-338. DOI: 10.1088/1674-0068/20/04/333-338  0.539
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