| Year |
Citation |
Score |
| 2020 |
Caraglio M, Sakaue T, Carlon E. Transition path times in asymmetric barriers. Physical Chemistry Chemical Physics : Pccp. 22: 3512-3519. PMID 31993608 DOI: 10.1039/C9Cp05659A |
0.348 |
|
| 2019 |
Nomidis SK, Caraglio M, Laleman M, Phillips K, Skoruppa E, Carlon E. Twist-bend coupling, twist waves, and the shape of DNA loops. Physical Review. E. 100: 022402. PMID 31574750 DOI: 10.1103/Physreve.100.022402 |
0.371 |
|
| 2019 |
Nomidis S, Szymonik M, Venken T, Carlon E, Hooyberghs J. Enhancing the performance of DNA surface-hybridization biosensors through target depletion. Langmuir : the Acs Journal of Surfaces and Colloids. PMID 31433651 DOI: 10.1021/Acs.Langmuir.9B01761 |
0.325 |
|
| 2019 |
Nomidis SK, Skoruppa E, Carlon E, Marko JF. Twist-bend coupling and the statistical mechanics of the twistable wormlike-chain model of DNA: Perturbation theory and beyond. Physical Review. E. 99: 032414. PMID 30999490 DOI: 10.1103/Physreve.99.032414 |
0.385 |
|
| 2019 |
Caraglio M, Skoruppa E, Carlon E. Overtwisting induces polygonal shapes in bent DNA. The Journal of Chemical Physics. 150: 135101. PMID 30954045 DOI: 10.1063/1.5084950 |
0.373 |
|
| 2018 |
Caraglio M, Put S, Carlon E, Vanderzande C. The influence of absorbing boundary conditions on the transition path time statistics. Physical Chemistry Chemical Physics : Pccp. PMID 30211419 DOI: 10.1039/C8Cp04322A |
0.319 |
|
| 2018 |
Skoruppa E, Nomidis SK, Marko JF, Carlon E. Bend-Induced Twist Waves and the Structure of Nucleosomal DNA. Physical Review Letters. 121: 088101. PMID 30192578 DOI: 10.1103/Physrevlett.121.088101 |
0.336 |
|
| 2018 |
Carlon E, Orland H, Sakaue T, Vanderzande C. Effect of Memory and Active Forces on Transition Path Time Distributions. The Journal of Physical Chemistry. B. 122: 11186-11194. PMID 30102039 DOI: 10.1021/Acs.Jpcb.8B06379 |
0.32 |
|
| 2018 |
Nomidis SK, Hooyberghs J, Maglia G, Carlon E. DNA capture into the ClyA nanopore: diffusion-limited versus reaction-limited processes. Journal of Physics. Condensed Matter : An Institute of Physics Journal. PMID 29893712 DOI: 10.1088/1361-648X/Aacc01 |
0.367 |
|
| 2018 |
Laleman M, Carlon E, Orland H. Transition path time distributions. The Journal of Chemical Physics. 147: 214103. PMID 29221402 DOI: 10.1063/1.5000423 |
0.319 |
|
| 2017 |
Nomidis SK, Kriegel F, Vanderlinden W, Lipfert J, Carlon E. Twist-Bend Coupling and the Torsional Response of Double-Stranded DNA. Physical Review Letters. 118: 217801. PMID 28598642 DOI: 10.1103/Physrevlett.118.217801 |
0.363 |
|
| 2017 |
Skoruppa E, Laleman M, Nomidis SK, Carlon E. DNA elasticity from coarse-grained simulations: The effect of groove asymmetry. The Journal of Chemical Physics. 146: 214902. PMID 28595422 DOI: 10.1063/1.4984039 |
0.391 |
|
| 2017 |
Sakaue T, Walter JC, Carlon E, Vanderzande C. Non-Markovian dynamics of reaction coordinate in polymer folding Soft Matter. 13: 3174-3181. PMID 28397905 DOI: 10.1039/C7Sm00395A |
0.336 |
|
| 2016 |
Franceschini L, Brouns T, Willems K, Carlon E, Maglia G. DNA Translocation through Nanopores at Physiological Ionic Strengths Requires Precise Nanoscale Engineering. Acs Nano. 10: 8394-402. PMID 27513592 DOI: 10.1021/Acsnano.6B03159 |
0.361 |
|
| 2016 |
Laleman M, Baiesi M, Belotserkovskii BP, Sakaue T, Walter JC, Carlon E. Torque-Induced Rotational Dynamics in Polymers: Torsional Blobs and Thinning Macromolecules. 49: 405-414. DOI: 10.1021/Acs.Macromol.5B01481 |
0.313 |
|
| 2014 |
Frederickx R, Veld Ti, Carlon E. Anomalous dynamics of DNA hairpin folding. Physical Review Letters. 112: 198102-198107. PMID 24877968 DOI: 10.1103/Physrevlett.112.198102 |
0.376 |
|
| 2014 |
Walter JC, Laleman M, Baiesi M, Carlon E. Rotational dynamics of entangled polymers European Physical Journal: Special Topics. 223: 3201-3213. DOI: 10.1140/Epjst/E2014-02327-3 |
0.312 |
|
| 2014 |
Walter JC, Baiesi M, Carlon E, Schiessel H. Unwinding dynamics of a helically wrapped polymer Macromolecules. 47: 4840-4846. DOI: 10.1021/Ma500635H |
0.321 |
|
| 2013 |
Walter JC, Baiesi M, Barkema GT, Carlon E. Unwinding relaxation dynamics of polymers. Physical Review Letters. 110: 068301. PMID 23432311 DOI: 10.1103/Physrevlett.110.068301 |
0.324 |
|
| 2012 |
Hadiwikarta WW, Walter JC, Hooyberghs J, Carlon E. Probing hybridization parameters from microarray experiments: nearest-neighbor model and beyond. Nucleic Acids Research. 40: e138. PMID 22661582 DOI: 10.1093/Nar/Gks475 |
0.388 |
|
| 2012 |
Walter JC, Ferrantini A, Carlon E, Vanderzande C. Fractional Brownian motion and the critical dynamics of zipping polymers. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 85: 031120. PMID 22587051 DOI: 10.1103/Physreve.85.031120 |
0.38 |
|
| 2011 |
Walter JC, Kroll KM, Hooyberghs J, Carlon E. Nonequilibrium effects in DNA microarrays: a multiplatform study. The Journal of Physical Chemistry. B. 115: 6732-9. PMID 21542593 DOI: 10.1021/Jp2014034 |
0.371 |
|
| 2011 |
Ferrantini A, Carlon E. Anomalous zipping dynamics and forced polymer translocation Journal of Statistical Mechanics: Theory and Experiment. 2011: 2020. DOI: 10.1088/1742-5468/2011/02/P02020 |
0.352 |
|
| 2010 |
Baiesi M, Barkema GT, Carlon E, Panja D. Unwinding dynamics of double-stranded polymers. The Journal of Chemical Physics. 133: 154907. PMID 20969426 DOI: 10.1063/1.3505551 |
0.367 |
|
| 2010 |
Hooyberghs J, Carlon E. Hybridisation thermodynamic parameters allow accurate detection of point mutations with DNA microarrays. Biosensors & Bioelectronics. 26: 1692-5. PMID 20719495 DOI: 10.1016/J.Bios.2010.07.039 |
0.34 |
|
| 2010 |
Hooyberghs J, Baiesi M, Ferrantini A, Carlon E. Breakdown of thermodynamic equilibrium for DNA hybridization in microarrays. Physical Review E. 81: 12901. PMID 20365418 DOI: 10.1103/Physreve.81.012901 |
0.379 |
|
| 2010 |
Ferrantini A, Baiesi M, Carlon E. A lattice polymer study of DNA renaturation dynamics Journal of Statistical Mechanics: Theory and Experiment. 2010: 3017. DOI: 10.1088/1742-5468/2010/03/P03017 |
0.394 |
|
| 2009 |
Hooyberghs J, Van Hummelen P, Carlon E. The effects of mismatches on hybridization in DNA microarrays: determination of nearest neighbor parameters. Nucleic Acids Research. 37: e53. PMID 19270064 DOI: 10.1093/Nar/Gkp109 |
0.39 |
|
| 2009 |
Ferrantini A, Allemeersch J, Van Hummelen P, Carlon E. Thermodynamic scaling behavior in genechips. Bmc Bioinformatics. 10: 3. PMID 19123958 DOI: 10.1186/1471-2105-10-3 |
0.306 |
|
| 2008 |
Kroll KM, Barkema GT, Carlon E. Modeling background intensity in DNA microarrays. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 77: 061915. PMID 18643308 DOI: 10.1103/Physreve.77.061915 |
0.371 |
|
| 2008 |
Ferrantini A, Carlon E. On the relationship between perfect matches and mismatches in Affymetrix Genechips Gene. 422: 1-6. PMID 18621117 DOI: 10.1016/J.Gene.2008.06.013 |
0.32 |
|
| 2008 |
Carlon E. Thermodynamics of DNA microarrays Banach Center Publications. 80: 229-233. DOI: 10.4064/Bc80-0-13 |
0.328 |
|
| 2007 |
Weckx S, Carlon E, DeVuyst L, Van Hummelen P. Thermodynamic behavior of short oligonucleotides in microarray hybridizations can be described using Gibbs free energy in a nearest-neighbor model. The Journal of Physical Chemistry. B. 111: 13583-90. PMID 17994724 DOI: 10.1021/Jp075197X |
0.374 |
|
| 2006 |
Heim T, Tranchevent LC, Carlon E, Barkema GT. Physical-chemistry-based analysis of affymetrix microarray data. Journal of Physical Chemistry B. 110: 22786-22795. PMID 17092029 DOI: 10.1021/Jp062889X |
0.336 |
|
| 2006 |
Carlon E, Heim T, Wolterink JK, Barkema GT. Comment on "Solving the riddle of the bright mismatches: labeling and effective binding in oligonucleotide arrays". Physical Review E. 73: 63901. PMID 16906888 DOI: 10.1103/Physreve.73.063901 |
0.32 |
|
| 2006 |
Heim T, Wolterink JK, Carlon E, Barkema GT. Effective affinities in microarray data Journal of Physics: Condensed Matter. 18: 525-536. DOI: 10.1088/0953-8984/18/18/S03 |
0.366 |
|
| 2006 |
Carlon E, Heim T. Thermodynamics of RNA/DNA hybridization in high-density oligonucleotide microarrays Physica a-Statistical Mechanics and Its Applications. 362: 433-449. DOI: 10.1016/J.Physa.2005.09.067 |
0.369 |
|
| 2005 |
Carlon E, Malki ML, Blossey R. Exons, introns, and DNA thermodynamics. Physical Review Letters. 94: 178101. PMID 15904337 DOI: 10.1103/Physrevlett.94.178101 |
0.327 |
|
| 2005 |
Lajko P, Carlon E, Rieger H, Igloi F. Disorder-induced phases in the S=1 antiferromagnetic Heisenberg chain Physical Review B. 72: 94205. DOI: 10.1103/Physrevb.72.094205 |
0.339 |
|
| 2004 |
Carlon E, Baiesi M. Unbinding of mutually avoiding random walks and two-dimensional quantum gravity. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 70: 066118. PMID 15697445 DOI: 10.1103/Physreve.70.066118 |
0.366 |
|
| 2003 |
Blossey R, Carlon E. Reparametrizing the loop entropy weights: effect on DNA melting curves. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 68: 061911. PMID 14754238 DOI: 10.1103/Physreve.68.061911 |
0.385 |
|
| 2003 |
Drzewiński A, Carlon E, Leeuwen JMJv. Pulling reptating polymers by one end: magnetophoresis in the Rubinstein-Duke model. Physical Review E. 68: 61801. PMID 14754226 DOI: 10.1103/Physreve.68.061801 |
0.327 |
|
| 2003 |
Barkema GT, Carlon E. Universality in the pair contact process with diffusion. Physical Review E. 68: 36113-36113. PMID 14524838 DOI: 10.1103/Physreve.68.036113 |
0.333 |
|
| 2003 |
Baiesi M, Carlon E, Kafri Y, Mukamel D, Orlandini E, Stella AL. Interstrand distance distribution of DNA near melting Physical Review E - Statistical, Nonlinear, and Soft Matter Physics. 67: 219111-219116. DOI: 10.1103/Physreve.67.021911 |
0.378 |
|
| 2002 |
Baiesi M, Carlon E, Stella AL. Scaling in DNA unzipping models: denaturated loops and end segments as branches of a block copolymer network. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 66: 021804. PMID 12241205 DOI: 10.1103/Physreve.66.021804 |
0.372 |
|
| 2002 |
Carlon E, Orlandini E, Stella AL. Roles of stiffness and excluded volume in DNA denaturation. Physical Review Letters. 88: 198101. PMID 12005666 DOI: 10.1103/Physrevlett.88.198101 |
0.369 |
|
| 2002 |
Baiesi M, Carlon E, Orlandini E, Stella AL. A simple model of DNA denaturation and mutually avoiding walks statistics European Physical Journal B. 29: 129-134. DOI: 10.1140/Epjb/E2002-00270-2 |
0.391 |
|
| 2002 |
Carlon E, Drzewiński A, Leeuwen JMJv. Reptation in the Rubinstein–Duke model: The influence of end-reptons dynamics Journal of Chemical Physics. 117: 2425-2434. DOI: 10.1063/1.1488590 |
0.366 |
|
| 2001 |
Parry AO, Wood AJ, Carlon E, Drzewiński A. Universal phase boundary shifts for corner wetting and filling Physical Review Letters. 87: 196103. PMID 11690432 DOI: 10.1103/Physrevlett.87.196103 |
0.311 |
|
| 2001 |
Hooyberghs J, Carlon E, Vanderzande C. Generalized contact process with n absorbing states. Physical Review E. 64: 36124. PMID 11580411 DOI: 10.1103/Physreve.64.036124 |
0.317 |
|
| 2001 |
Carlon E, Drzewinski A, Leeuwen JMJv. Crossover behavior for long reptating polymers. Physical Review E. 64: 10801. PMID 11461214 DOI: 10.1103/Physreve.64.010801 |
0.382 |
|
| 2001 |
Baiesi M, Carlon E, Orlandini E, Stella AL. Zipping and collapse of diblock copolymers. Physical Review E. 63: 41801. PMID 11308868 DOI: 10.1103/Physreve.63.041801 |
0.355 |
|
| 2001 |
Carlon E, Henkel M, Schollwöck U. Critical properties of the reaction-diffusion model 2A-->3A, 2A-->0. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 63: 036101. PMID 11308703 DOI: 10.1103/Physreve.63.036101 |
0.5 |
|
| 2000 |
Carlon E, Beijeren Hv. Equilibrium shapes and faceting for ionic crystals of body-centered-cubic type Physical Review E. 62: 7646-7657. PMID 11138034 DOI: 10.1103/Physreve.62.7646 |
0.337 |
|
| 1999 |
Carlon E, Chatelain C, Berche B. Critical Behavior Of The Random Potts Chain Physical Review B. 60: 12974-12981. DOI: 10.1103/Physrevb.60.12974 |
0.366 |
|
| 1999 |
Iglói F, Carlon E. Boundary And Bulk Phase Transitions In The Two-Dimensional Q-State Potts Model (Q>4) Physical Review B. 59: 3783-3792. DOI: 10.1103/Physrevb.59.3783 |
0.354 |
|
| 1999 |
Carlon E, Henkel M, Schollwöck U. Density matrix renormalization group and reaction-diffusion processes European Physical Journal B. 12: 99-114. DOI: 10.1007/S100510050983 |
0.533 |
|
| 1998 |
Carlon E, Iglói F. Density profiles, Casimir amplitudes, and critical exponents in the two-dimensional Potts model: A density-matrix renormalization study Physical Review B. 57: 7877-7886. DOI: 10.1103/Physrevb.57.7877 |
0.365 |
|
| 1998 |
Carlon E, Drzewiński A. Phase coexistence in confined Ising systems: a density matrix renormalization approach Fluid Phase Equilibria. 150: 583-589. DOI: 10.1016/S0378-3812(98)00305-7 |
0.345 |
|
| 1997 |
Carlon E, Drzewiński A. Effect of Gravity and Confinement on Phase Equilibria: A Density Matrix Renormalization Approach Physical Review Letters. 79: 1591-1594. DOI: 10.1103/Physrevlett.79.1591 |
0.324 |
|
| 1997 |
Carlon E, Mazzeo G, Beijeren Hv. Transfer-matrix study of the staggered body-centered solid-on-solid model Physical Review B. 55: 757-770. DOI: 10.1103/Physrevb.55.757 |
0.32 |
|
| 1995 |
Mazzeo G, Carlon E, Beijeren Hv. Phase Diagram Of The Two Component Body-Centered Solid-On-Solid Model Physical Review Letters. 74: 1391-1394. PMID 10059008 DOI: 10.1103/Physrevlett.74.1391 |
0.313 |
|
| Show low-probability matches. |