Evan Snitkin - Publications

Affiliations: 
University of Michigan, Ann Arbor, Ann Arbor, MI 

15 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Saund K, Pirani A, Lacy DB, Hanna PC, Snitkin E. Strain Variation in Clostridioides difficile Cytotoxicity Associated with Genomic Variation at Both Pathogenic and Nonpathogenic Loci. Msphere. 7: e0017422. PMID 35766503 DOI: 10.1128/msphere.00174-22  0.327
2021 Crawford RD, Snitkin ES. cognac: rapid generation of concatenated gene alignments for phylogenetic inference from large, bacterial whole genome sequencing datasets. Bmc Bioinformatics. 22: 70. PMID 33588753 DOI: 10.1186/s12859-021-03981-4  0.322
2021 Allen JP, Snitkin E, Pincus NB, Hauser AR. Forest and Trees: Exploring Bacterial Virulence with Genome-wide Association Studies and Machine Learning. Trends in Microbiology. PMID 33455849 DOI: 10.1016/j.tim.2020.12.002  0.334
2020 Saund K, Snitkin ES. Hogwash: three methods for genome-wide association studies in bacteria. Microbial Genomics. 6. PMID 33206035 DOI: 10.1099/mgen.0.000469  0.31
2015 Popovich KJ, Snitkin E, Green SJ, Aroutcheva A, Hayden MK, Hota B, Weinstein RA. Genomic Epidemiology of USA300 Methicillin-Resistant Staphylococcus aureus in an Urban Community. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. PMID 26347509 DOI: 10.1093/Cid/Civ794  0.32
2011 Snitkin ES, Segrè D. Epistatic interaction maps relative to multiple metabolic phenotypes. Plos Genetics. 7: e1001294. PMID 21347328 DOI: 10.1371/Journal.Pgen.1001294  0.609
2010 Segre JA, Grice EA, Kong HH, Conlan S, Snitkin E, Mijares L, Murray P, Green ED, Turner ML. Skin microbiome in health and disease Genome Biology. 11: 1-1. DOI: 10.1186/Gb-2010-11-S1-I18  0.327
2009 Linghu B, Snitkin ES, Hu Z, Xia Y, Delisi C. Genome-wide prioritization of disease genes and identification of disease-disease associations from an integrated human functional linkage network. Genome Biology. 10: R91. PMID 19728866 DOI: 10.1186/Gb-2009-10-9-R91  0.71
2009 Mazumdar V, Snitkin ES, Amar S, Segrè D. Metabolic network model of a human oral pathogen. Journal of Bacteriology. 191: 74-90. PMID 18931137 DOI: 10.1128/Jb.01123-08  0.613
2008 Snitkin ES, Segrè D. Optimality criteria for the prediction of metabolic fluxes in yeast mutants. Genome Informatics. International Conference On Genome Informatics. 20: 123-34. PMID 19425128  0.582
2008 Snitkin ES, Dudley AM, Janse DM, Wong K, Church GM, Segrè D. Model-driven analysis of experimentally determined growth phenotypes for 465 yeast gene deletion mutants under 16 different conditions. Genome Biology. 9: R140. PMID 18808699 DOI: 10.1186/Gb-2008-9-9-R140  0.667
2008 Hu Z, Snitkin ES, DeLisi C. VisANT: an integrative framework for networks in systems biology. Briefings in Bioinformatics. 9: 317-25. PMID 18463131 DOI: 10.1093/Bib/Bbn020  0.53
2008 Linghu B, Snitkin ES, Holloway DT, Gustafson AM, Xia Y, DeLisi C. High-precision high-coverage functional inference from integrated data sources. Bmc Bioinformatics. 9: 119. PMID 18298847 DOI: 10.1186/1471-2105-9-119  0.537
2006 Gustafson AM, Snitkin ES, Parker SC, DeLisi C, Kasif S. Towards the identification of essential genes using targeted genome sequencing and comparative analysis. Bmc Genomics. 7: 265. PMID 17052348 DOI: 10.1186/1471-2164-7-265  0.707
2006 Snitkin ES, Gustafson AM, Mellor J, Wu J, DeLisi C. Comparative assessment of performance and genome dependence among phylogenetic profiling methods. Bmc Bioinformatics. 7: 420. PMID 17005048 DOI: 10.1186/1471-2105-7-420  0.697
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