Paul Murphy - Publications

Affiliations: 
2020- IMP Vienna 

26 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 García Caballero G, Manning JC, Gabba A, Beckwith D, FitzGerald FG, Kutzner TJ, Ludwig AK, Kaltner H, Murphy PV, Cudic M, Gabius HJ. Exploring the Galectin Network by Light and Fluorescence Microscopy. Methods in Molecular Biology (Clifton, N.J.). 2442: 307-338. PMID 35320533 DOI: 10.1007/978-1-0716-2055-7_17  0.302
2021 Ludwig AK, Michalak M, Gabba A, Kutzner TJ, Beckwith DM, FitzGerald FG, García Caballero G, Manning JC, Kriegsmann M, Kaltner H, Murphy PV, Cudic M, Kopitz J, Gabius HJ. Imitating evolution's tinkering by protein engineering reveals extension of human galectin-7 activity. Histochemistry and Cell Biology. PMID 34152508 DOI: 10.1007/s00418-021-02004-w  0.457
2021 Gabba A, Bogucka A, Luz JG, Diniz A, Coelho H, Corzana F, Cañada FJ, Marcelo F, Murphy PV, Birrane G. Crystal Structure of the Carbohydrate Recognition Domain of the Human Macrophage Galactose C-Type Lectin Bound to GalNAc and the Tumor-Associated Tn Antigen. Biochemistry. PMID 33724805 DOI: 10.1021/acs.biochem.1c00009  0.395
2020 Murphy P, Xu Y, Rouse SL, Jaffray EG, Plechanovová A, Matthews SJ, Carlos Penedo J, Hay RT. Functional 3D architecture in an intrinsically disordered E3 ligase domain facilitates ubiquitin transfer. Nature Communications. 11: 3807. PMID 32733036 DOI: 10.1038/S41467-020-17647-X  0.555
2020 García Caballero G, Beckwith D, Shilova NV, Gabba A, Kutzner TJ, Ludwig AK, Manning JC, Kaltner H, Sinowatz F, Cudic M, Bovin NV, Murphy PV, Gabius HJ. Influence of protein (human galectin-3) design on aspects of lectin activity. Histochemistry and Cell Biology. PMID 32335744 DOI: 10.1007/S00418-020-01859-9  0.469
2019 Negi A, Reilly CO, Jarikote DV, Zhou J, Murphy PV. Multi-targeting protein-protein interaction inhibitors: Evolution of macrocyclic ligands with embedded carbohydrates (MECs) to improve selectivity. European Journal of Medicinal Chemistry. 176: 292-309. PMID 31112891 DOI: 10.1016/J.Ejmech.2019.04.064  0.366
2019 Kutzner TJ, Gabba A, FitzGerald FG, Shilova NV, García Caballero G, Ludwig AK, Manning JC, Knospe C, Kaltner H, Sinowatz F, Murphy PV, Cudic M, Bovin NV, Gabius HJ. How altering the modular architecture affects aspects of lectin activity: case study on human galectin-1. Glycobiology. PMID 31091305 DOI: 10.1093/Glycob/Cwz034  0.378
2016 Pao KC, Stanley M, Han C, Lai YC, Murphy P, Balk K, Wood NT, Corti O, Corvol JC, Muqit MM, Virdee S. Probes of ubiquitin E3 ligases enable systematic dissection of parkin activation. Nature Chemical Biology. PMID 26928937 DOI: 10.1038/Nchembio.2045  0.304
2015 Stanley M, Han C, Knebel A, Murphy P, Shpiro N, Virdee S. Orthogonal Thiol Functionalization at a Single Atomic Center for Profiling Transthiolation Activity of E1 Activating Enzymes. Acs Chemical Biology. 10: 1542-54. PMID 25845023 DOI: 10.1021/Acschembio.5B00118  0.438
2015 André S, Kaltner H, Manning JC, Murphy PV, Gabius HJ. Lectins: getting familiar with translators of the sugar code. Molecules (Basel, Switzerland). 20: 1788-823. PMID 25621423 DOI: 10.3390/Molecules20021788  0.311
2014 André S, Wang GN, Gabius HJ, Murphy PV. Combining glycocluster synthesis with protein engineering: an approach to probe into the significance of linker length in a tandem-repeat-type lectin (galectin-4). Carbohydrate Research. 389: 25-38. PMID 24698724 DOI: 10.1016/J.Carres.2013.12.024  0.314
2012 Wang GN, André S, Gabius HJ, Murphy PV. Bi- to tetravalent glycoclusters: synthesis, structure-activity profiles as lectin inhibitors and impact of combining both valency and headgroup tailoring on selectivity. Organic & Biomolecular Chemistry. 10: 6893-907. PMID 22842468 DOI: 10.1039/C2Ob25870F  0.375
2011 Fleishman SJ, Leaver-Fay A, Corn JE, Strauch EM, Khare SD, Koga N, Ashworth J, Murphy P, Richter F, Lemmon G, Meiler J, Baker D. RosettaScripts: a scripting language interface to the Rosetta macromolecular modeling suite. Plos One. 6: e20161. PMID 21731610 DOI: 10.1371/Journal.Pone.0020161  0.302
2009 Murphy PM, Bolduc JM, Gallaher JL, Stoddard BL, Baker D. Alteration of enzyme specificity by computational loop remodeling and design. Proceedings of the National Academy of Sciences of the United States of America. 106: 9215-20. PMID 19470646 DOI: 10.1073/Pnas.0811070106  0.46
2007 Matos MC, Murphy PV. Synthesis of macrolide-saccharide hybrids by ring-closing metathesis of precursors derived from glycitols and benzoic acids. The Journal of Organic Chemistry. 72: 1803-6. PMID 17274658 DOI: 10.1021/Jo062159L  0.335
2007 Wollacott AM, Zanghellini A, Murphy P, Baker D. Prediction of structures of multidomain proteins from structures of the individual domains. Protein Science : a Publication of the Protein Society. 16: 165-75. PMID 17189483 DOI: 10.1110/Ps.062270707  0.494
2005 Tosin M, Murphy PV. Synthesis of structurally defined scaffolds for bivalent ligand display based on glucuronic acid anilides. The degree of tertiary amide isomerism and folding depends on the configuration of a glycosyl azide. The Journal of Organic Chemistry. 70: 4107-17. PMID 15876103 DOI: 10.1021/Jo050200Z  0.443
2005 Murphy PV, Müller-Bunz H, Velasco-Torrijos T. The crystal structure of a cyclic glycolipid reveals a carbohydrate-carbohydrate interaction interface. Carbohydrate Research. 340: 1437-40. PMID 15854619 DOI: 10.1016/J.Carres.2005.02.026  0.325
2005 Abendroth J, Murphy P, Sandkvist M, Bagdasarian M, Hol WG. The X-ray structure of the type II secretion system complex formed by the N-terminal domain of EpsE and the cytoplasmic domain of EpsL of Vibrio cholerae. Journal of Molecular Biology. 348: 845-55. PMID 15843017 DOI: 10.1016/J.Jmb.2005.02.061  0.449
2004 Velasco-Torrijos T, Murphy PV. Metathesis of structurally preorganized bivalent carbohydrates. Synthesis of macrocyclic and oligomeric scaffolds. Organic Letters. 6: 3961-4. PMID 15496074 DOI: 10.1021/Ol0484254  0.308
2004 Tosin M, Müller-Bunz H, Murphy PV. Synthesis and X-ray single crystal structure of a bivalent glycocluster. Chemical Communications (Cambridge, England). 494-5. PMID 14973574 DOI: 10.1039/B313934D  0.325
2003 Chivian D, Kim DE, Malmström L, Bradley P, Robertson T, Murphy P, Strauss CE, Bonneau R, Rohl CA, Baker D. Automated prediction of CASP-5 structures using the Robetta server. Proteins. 53: 524-33. PMID 14579342 DOI: 10.1002/Prot.10529  0.398
2003 Bradley P, Chivian D, Meiler J, Misura KM, Rohl CA, Schief WR, Wedemeyer WJ, Schueler-Furman O, Murphy P, Schonbrun J, Strauss CE, Baker D. Rosetta predictions in CASP5: successes, failures, and prospects for complete automation. Proteins. 53: 457-68. PMID 14579334 DOI: 10.1002/Prot.10552  0.455
2003 Murphy PV, Bradley H, Tosin M, Pitt N, Fitzpatrick GM, Glass WK. Development of carbohydrate-based scaffolds for restricted presentation of recognition groups. Extension to divalent ligands and implications for the structure of dimerized receptors. The Journal of Organic Chemistry. 68: 5692-704. PMID 12839465 DOI: 10.1021/Jo034336D  0.411
2003 Husberg C, Murphy P, Bjørgo E, Kalland KH, Kolstø AB. Cellular localisation and nuclear export of the human bZIP transcription factor TCF11. Biochimica Et Biophysica Acta. 1640: 143-51. PMID 12729924 DOI: 10.1016/S0167-4889(03)00041-7  0.389
2001 Husberg C, Murphy P, Martin E, Kolsto AB. Two domains of the human bZIP transcription factor TCF11 are necessary for transactivation. The Journal of Biological Chemistry. 276: 17641-52. PMID 11278371 DOI: 10.1074/jbc.M007951200  0.391
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